Personal tools

UBERON:0006558

From FANTOM5_SSTAR

Jump to: navigation, search

Name:lymphatic part of lymphoid system
Namespace:FANTOM
Xrefs:
links:

AAO:0010522
EFO:0000870
EMAPA:18248
FMA:7162
MA:0002961
MESH:A.15.382.520

SCTID:362597000
Synonyms: "lymphatic system" EXACT [FMA:7162, MA:0002435]
"lymphatic tree system" EXACT [FMA:7162]

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0000477(anatomical cluster)
part_of:UBERON:0001009(circulatory system),UBERON:0002465(lymphoid system),UBERON:0007798(vascular system)



Children

part of:UBERON:0001473 (lymphatic vessel)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006558 (lymphatic part of lymphoid system), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
5.05e-102FFCP PHASE2:Hg19::chr9:13432964..13432971,-#_45fa98923a5b178cae4150f760f59034p@chr9:13432964..13432971, -
5.05e-102FFCP PHASE1:Hg19::chr9:13432964..13432971,-#_45fa98923a5b178cae4150f760f59034p@chr9:13432964..13432971, -
4.74e-79FFCP PHASE1:Hg19::chr1:65344872..65344880,-#_ce8ff4a6ac0e20cc9135fa073bdba9f8p15@JAK1
4.74e-79FFCP PHASE2:Hg19::chr1:65344872..65344880,-#_ce8ff4a6ac0e20cc9135fa073bdba9f8p15@JAK1
1.08e-76FFCP PHASE2:Hg19::chr3:30560368..30560379,+#_4a6e6900a1a858b4135da603c138fae8p@chr3:30560368..30560379, +
1.08e-76FFCP PHASE1:Hg19::chr3:30560368..30560379,+#_4a6e6900a1a858b4135da603c138fae8p@chr3:30560368..30560379, +
6.73e-74FFCP PHASE2:Hg19::chr17:28534912..28534942,-#_d0ecbc8e069a2c226e4fef0add5fd0dbp@chr17:28534912..28534942, -
6.73e-74FFCP PHASE1:Hg19::chr17:28534912..28534942,-#_d0ecbc8e069a2c226e4fef0add5fd0dbp@chr17:28534912..28534942, -
2.1e-68FFCP PHASE2:Hg19::chr2:56149881..56149899,-#_20fba18950713e64268a4574654f802ap14@EFEMP1
2.1e-68FFCP PHASE1:Hg19::chr2:56149881..56149899,-#_20fba18950713e64268a4574654f802ap14@EFEMP1
1.18e-65FFCP PHASE2:Hg19::chr19:48613876..48613886,-#_cfd2d45f7f5158b35a1a152fca2594b9p7@PLA2G4C
1.18e-65FFCP PHASE1:Hg19::chr19:48613876..48613886,-#_cfd2d45f7f5158b35a1a152fca2594b9p7@PLA2G4C
3.64e-64FFCP PHASE2:Hg19::chr6:74848034..74848043,+#_be964c56bffde13dc90dbaad0e5d1d90p@chr6:74848034..74848043, +
3.64e-64FFCP PHASE1:Hg19::chr6:74848034..74848043,+#_be964c56bffde13dc90dbaad0e5d1d90p@chr6:74848034..74848043, +
6.87e-57FFCP PHASE2:Hg19::chr6:5054373..5054392,-#_edbfa038f5362900785c6ed0635e6a75p1@AK126470
6.87e-57FFCP PHASE1:Hg19::chr6:5054373..5054392,-#_edbfa038f5362900785c6ed0635e6a75p1@AK126470
9.15e-57FFCP PHASE2:Hg19::chr7:79998842..79998855,+#_8509c8c0dcccd79c32552c63755a1f8ep25@CD36
9.15e-57FFCP PHASE1:Hg19::chr7:79998842..79998855,+#_8509c8c0dcccd79c32552c63755a1f8ep25@CD36
1.06e-56FFCP PHASE2:Hg19::chr3:145968441..145968451,-#_71fd12a2e5c34bc99282b4359e3c1a8dp17@PLSCR4
1.06e-56FFCP PHASE1:Hg19::chr3:145968441..145968451,-#_71fd12a2e5c34bc99282b4359e3c1a8dp17@PLSCR4
1.22e-56FFCP PHASE1:Hg19::chr2:33661536..33661549,+#_12cacb4ae6e628888fd167050b8e75bfp17@RASGRP3
1.22e-56FFCP PHASE2:Hg19::chr2:33661536..33661549,+#_12cacb4ae6e628888fd167050b8e75bfp17@RASGRP3
1.41e-56FFCP PHASE2:Hg19::chr9:13446440..13446456,+#_1b9015ca0f3ac8bc2ba595c9af37e04ap2@ENST00000428006
1.41e-56FFCP PHASE1:Hg19::chr9:13446440..13446456,+#_1b9015ca0f3ac8bc2ba595c9af37e04ap2@ENST00000428006
4.57e-56FFCP PHASE2:Hg19::chr17:28534879..28534889,-#_5d250e1aafed1efecb4f5f820118f20ap@chr17:28534879..28534889, -
4.57e-56FFCP PHASE2:Hg19::chr12:46807404..46807413,+#_5d250e1aafed1efecb4f5f820118f20ap@chr12:46807404..46807413, +
4.57e-56FFCP PHASE1:Hg19::chr17:28534879..28534889,-#_5d250e1aafed1efecb4f5f820118f20ap@chr17:28534879..28534889, -
4.57e-56FFCP PHASE1:Hg19::chr12:46807404..46807413,+#_5d250e1aafed1efecb4f5f820118f20ap@chr12:46807404..46807413, +
6.66e-56FFCP PHASE1:Hg19::chr7:79998905..79998917,+#_277d81d3cd7e0679ac96d79660c6c9a7p26@CD36
6.66e-56FFCP PHASE2:Hg19::chr7:79998905..79998917,+#_277d81d3cd7e0679ac96d79660c6c9a7p26@CD36
2.32e-54FFCP PHASE2:Hg19::chr8:30300216..30300245,+#_d0324a4b5f02b670d54b55741a8f1ebfp10@RBPMS
2.32e-54FFCP PHASE1:Hg19::chr8:30300216..30300245,+#_d0324a4b5f02b670d54b55741a8f1ebfp10@RBPMS
3.99e-50FFCP PHASE1:Hg19::chr11:108794408..108794422,+#_6042600524dd555373bc12baff5f24bbp@chr11:108794408..108794422, +
3.99e-50FFCP PHASE1:Hg19::chr11:108794429..108794441,+#_6042600524dd555373bc12baff5f24bbp@chr11:108794429..108794441, +
3.99e-50FFCP PHASE2:Hg19::chr4:114238344..114238353,+#_6042600524dd555373bc12baff5f24bbp58@ANK2
3.99e-50FFCP PHASE2:Hg19::chr11:108794408..108794422,+#_6042600524dd555373bc12baff5f24bbp@chr11:108794408..108794422, +
3.99e-50FFCP PHASE1:Hg19::chr17:75873825..75873826,+#_6042600524dd555373bc12baff5f24bbp@chr17:75873825..75873826, +
3.99e-50FFCP PHASE2:Hg19::chr17:75873825..75873826,+#_6042600524dd555373bc12baff5f24bbp@chr17:75873825..75873826, +
3.99e-50FFCP PHASE1:Hg19::chr4:114238344..114238353,+#_6042600524dd555373bc12baff5f24bbp58@ANK2
3.99e-50FFCP PHASE2:Hg19::chr2:33661526..33661535,+#_6042600524dd555373bc12baff5f24bbp23@RASGRP3
3.99e-50FFCP PHASE2:Hg19::chr11:108794429..108794441,+#_6042600524dd555373bc12baff5f24bbp@chr11:108794429..108794441, +
3.99e-50FFCP PHASE2:Hg19::chr1:66723029..66723041,+#_6042600524dd555373bc12baff5f24bbp54@PDE4B
3.99e-50FFCP PHASE1:Hg19::chr2:33661526..33661535,+#_6042600524dd555373bc12baff5f24bbp23@RASGRP3
3.99e-50FFCP PHASE1:Hg19::chr1:66723029..66723041,+#_6042600524dd555373bc12baff5f24bbp54@PDE4B
9.58e-48FFCP PHASE1:Hg19::chr4:189881560..189881604,-#_b42485ad34e23888598cc78c52738978p@chr4:189881560..189881604, -
9.58e-48FFCP PHASE2:Hg19::chr4:189881560..189881604,-#_b42485ad34e23888598cc78c52738978p@chr4:189881560..189881604, -
1.55e-47FFCP PHASE2:Hg19::chr4:90857427..90857438,+#_4cfa9fca89b36449f8fa5529a0296195p@chr4:90857427..90857438, +
1.55e-47FFCP PHASE1:Hg19::chr4:90857427..90857438,+#_4cfa9fca89b36449f8fa5529a0296195p@chr4:90857427..90857438, +
1.71e-47FFCP PHASE1:Hg19::chr10:4823152..4823165,-#_5b8e2738e9a35cf12c0c36c546602cf5p@chr10:4823152..4823165, -
1.71e-47FFCP PHASE2:Hg19::chr10:4823152..4823165,-#_5b8e2738e9a35cf12c0c36c546602cf5-, p@chr10:4823152..4823165
3.05e-47FFCP PHASE2:Hg19::chr6:49534004..49534016,+#_cc05023be04198997c99753de38cf74ep@chr6:49534004..49534016, +
3.05e-47FFCP PHASE1:Hg19::chr6:49534004..49534016,+#_cc05023be04198997c99753de38cf74ep@chr6:49534004..49534016, +
7.08e-47FFCP PHASE1:Hg19::chr12:96841308..96841312,+#_50c23a794c2b2e104c40d40e1118121bp@chr12:96841308..96841312, +
7.08e-47FFCP PHASE2:Hg19::chr12:96841308..96841312,+#_50c23a794c2b2e104c40d40e1118121bp@chr12:96841308..96841312, +
3.73e-45FFCP PHASE1:Hg19::chr1:43917566..43917577,-#_ab1dcfa23a4da1556ef0937e319b7b9dp6@HYI
3.73e-45FFCP PHASE2:Hg19::chr1:43917566..43917577,-#_ab1dcfa23a4da1556ef0937e319b7b9dp6@HYI
4.34e-45FFCP PHASE2:Hg19::chr3:34262215..34262222,+#_e553453b4f7b70a98e383cca073c85d8p@chr3:34262215..34262222, +
4.34e-45FFCP PHASE1:Hg19::chr3:34262215..34262222,+#_e553453b4f7b70a98e383cca073c85d8p@chr3:34262215..34262222, +
5.04e-45FFCP PHASE1:Hg19::chr18:54339814..54339822,+#_86936fed7cadb22e78696f8857635b49p7@WDR7
5.04e-45FFCP PHASE2:Hg19::chr18:54339814..54339822,+#_86936fed7cadb22e78696f8857635b49p7@WDR7
6.81e-45FFCP PHASE1:Hg19::chr7:10196589..10196595,-#_654f3abc9f8d73da9ec30a8e66c407c1p@chr7:10196589..10196595, -
6.81e-45FFCP PHASE2:Hg19::chr7:10196589..10196595,-#_654f3abc9f8d73da9ec30a8e66c407c1p@chr7:10196589..10196595, -
7.92e-45FFCP PHASE1:Hg19::chr2:62705562..62705579,+#_b98328728baba1972d1f016141d81598p@chr2:62705562..62705579, +
7.92e-45FFCP PHASE2:Hg19::chr2:62705562..62705579,+#_b98328728baba1972d1f016141d81598p@chr2:62705562..62705579, +
3.69e-44FFCP PHASE1:Hg19::chr4:90856951..90856962,+#_b75a67be1391248f6dac7595427bbffap@chr4:90856951..90856962, +
3.69e-44FFCP PHASE1:Hg19::chr12:71031281..71031292,-#_b75a67be1391248f6dac7595427bbffap12@PTPRB
3.69e-44FFCP PHASE2:Hg19::chr4:90856951..90856962,+#_b75a67be1391248f6dac7595427bbffap@chr4:90856951..90856962, +
3.69e-44FFCP PHASE2:Hg19::chr12:71031281..71031292,-#_b75a67be1391248f6dac7595427bbffap12@PTPRB
3.18e-40FFCP PHASE2:Hg19::chr12:105882068..105882076,+#_72fb3f9dbe47f510df213ad7dbd967f6p@chr12:105882068..105882076, +
3.18e-40FFCP PHASE1:Hg19::chr12:105882068..105882076,+#_72fb3f9dbe47f510df213ad7dbd967f6p@chr12:105882068..105882076, +
3.89e-40FFCP PHASE1:Hg19::chr8:6459787..6459796,+#_4a09e67fb22b9cb1a4410d9aadb16365p@chr8:6459787..6459796, +
3.89e-40FFCP PHASE2:Hg19::chr8:6459787..6459796,+#_4a09e67fb22b9cb1a4410d9aadb16365p@chr8:6459787..6459796, +
1.55e-39FFCP PHASE1:Hg19::chr4:38057595..38057624,-#_666f24a397c8bc586ac8a2d66fd738f6p@chr4:38057595..38057624, -
1.55e-39FFCP PHASE2:Hg19::chr4:38057595..38057624,-#_666f24a397c8bc586ac8a2d66fd738f6p@chr4:38057595..38057624, -
6.2e-39FFCP PHASE2:Hg19::chr3:194868639..194868654,+#_dc41b81435e4fcd1f7745e4478418413p1@ENST00000426468
6.2e-39FFCP PHASE1:Hg19::chr3:194868639..194868654,+#_dc41b81435e4fcd1f7745e4478418413p1@ENST00000426468
9.18e-38FFCP PHASE2:Hg19::chr8:16425014..16425019,-#_1568884d8c491a18e307046f6157c3cap13@MSR1
9.18e-38FFCP PHASE1:Hg19::chr8:16425014..16425019,-#_1568884d8c491a18e307046f6157c3cap13@MSR1
1.51e-37FFCP PHASE2:Hg19::chr6:168195978..168195989,+#_6f12ebf8ef31bad1c4b539a959091ea1p3@LOC441179
1.51e-37FFCP PHASE1:Hg19::chr6:168195978..168195989,+#_6f12ebf8ef31bad1c4b539a959091ea1p3@LOC441179
1.95e-37FFCP PHASE1:Hg19::chr2:27487913..27487933,-#_cdef6e90988680a54aa60f55af43544ep@chr2:27487913..27487933, -
1.95e-37FFCP PHASE2:Hg19::chr2:27487913..27487933,-#_cdef6e90988680a54aa60f55af43544ep@chr2:27487913..27487933, -
5.85e-37FFCP PHASE1:Hg19::chr8:6420777..6420779,-#_245c3413c2e6ac3c0c2ec5eeb6fc0139p5@ANGPT2
5.85e-37FFCP PHASE2:Hg19::chr8:6420777..6420779,-#_245c3413c2e6ac3c0c2ec5eeb6fc0139p5@ANGPT2
1.23e-36FFCP PHASE2:Hg19::chr6:168195926..168195943,+#_0cb5d1ae6a9374d65663d546629df65bp1@LOC441179
1.23e-36FFCP PHASE1:Hg19::chr6:168195926..168195943,+#_0cb5d1ae6a9374d65663d546629df65bp1@LOC441179
1.33e-36FFCP PHASE2:Hg19::chr10:94590895..94590905,+#_b13f635adf67a2923e1bd31ed746c126p8@EXOC6
1.33e-36FFCP PHASE1:Hg19::chr10:94590895..94590905,+#_b13f635adf67a2923e1bd31ed746c126p8@EXOC6
5.59e-36FFCP PHASE2:Hg19::chr8:16425043..16425061,-#_51add38687a5fb93e38c2d4bef4cac77p5@MSR1
5.59e-36FFCP PHASE1:Hg19::chr8:16425043..16425061,-#_51add38687a5fb93e38c2d4bef4cac77p5@MSR1
1.86e-34FFCP PHASE2:Hg19::chr17:79426425..79426444,+#_dd13baa17885e81fa7e82177e28d9345p@chr17:79426425..79426444, +
1.86e-34FFCP PHASE1:Hg19::chr17:79426425..79426444,+#_dd13baa17885e81fa7e82177e28d9345p@chr17:79426425..79426444, +
3.14e-34FFCP PHASE1:Hg19::chr11:57543275..57543296,+#_46d4cfa10f7cb54f3714d5208ba2cf7ap@chr11:57543275..57543296, +
3.14e-34FFCP PHASE2:Hg19::chr11:57543275..57543296,+#_46d4cfa10f7cb54f3714d5208ba2cf7ap@chr11:57543275..57543296, +
2.31e-33FFCP PHASE2:Hg19::chr19:45226133..45226157,-#_5cc680d3e67aad181979a158fe7847d9p@chr19:45226133..45226157, -
2.31e-33FFCP PHASE1:Hg19::chr19:45226133..45226157,-#_5cc680d3e67aad181979a158fe7847d9p@chr19:45226133..45226157, -
2.61e-33FFCP PHASE2:Hg19::chr3:159570877..159570888,+#_7e5aad795c7f0ab8b54b4cdead79f617p43@SCHIP1
2.61e-33FFCP PHASE1:Hg19::chr3:159570877..159570888,+#_7e5aad795c7f0ab8b54b4cdead79f617p43@SCHIP1
7.63e-33FFCP PHASE1:Hg19::chr12:71031220..71031229,-#_40455809bc6b44836d759df6b13b9751p10@PTPRB
7.63e-33FFCP PHASE2:Hg19::chr12:71031220..71031229,-#_40455809bc6b44836d759df6b13b9751p10@PTPRB










Property "Property value" (as page type) with input value "UBPROP:0000001 "Part of the circulatory system which consists of a series of vessels which collect blood (exclusive of erythrocytes) which seep through capillary walls and return it to the veins.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.