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UBERON:0000477

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Name:anatomical cluster
Namespace:FANTOM
Definition:"Anatomical group that has its parts adjacent to one another." [CARO:MAH]
Xrefs:
links:

AAO:0010009
AEO:0000041
BILA:0000041
CARO:0000041
EHDAA2:0003041
FBbt:00007277
FMA:49443
HAO:0000041
TADS:0000605
TAO:0001478
TGMA:0001842
VHOG:0001737
XAO:0003160

ZFA:0001478
Alt_id: UBERON:CARO_0000041-FMA_49443-ZFA_0001478
Subset: disjointness_axiom_removed
upper_level

Ontology association

Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.



link to ontology dataset


data

Parents

is_a:UBERON:0000480(anatomical group)



Children

is a:UBERON:0000170 (pair of lungs),UBERON:0000349 (limbic system),UBERON:0001353 (anal region),UBERON:0001556 (lower urinary tract),UBERON:0001737 (larynx),UBERON:0001839 (bony labyrinth),UBERON:0001844 (cochlea),UBERON:0001846 (internal ear),UBERON:0002049 (vasculature),UBERON:0002275 (reticular formation),UBERON:0002303 (juxtaglomerular apparatus),UBERON:0002465 (lymphoid system),UBERON:0002680 (regional part of metencephalon),UBERON:0003112 (olfactory region),UBERON:0003672 (dentition),UBERON:0004088 (ocular region),UBERON:0004111 (anatomical conduit),UBERON:0004288 (skeleton),UBERON:0004770 (articular system),UBERON:0004905 (articulation),UBERON:0005162 (multi cell component structure),UBERON:0005352 (spermatic cord),UBERON:0006558 (lymphatic part of lymphoid system),UBERON:0008814 (pharyngeal arch system),UBERON:0009142 (entire embryonic mesenchyme),UBERON:0009664 (gut mesentery),UBERON:0009751 (cardiac mesenchyme),UBERON:0009899 (pole of cerebral hemisphere),UBERON:0010743 (meningeal cluster),UBERON:0011143 (upper urinary tract),UBERON:0011216 (organ system subdivision),UBERON:0011595 (jaw region),UBERON:0011932 (pilosebaceous unit),UBERON:0012361 (internal anal region),UBERON:0012469 (external anal region),UBERON:0015238 (pineal complex),UBERON:0015827 (brainstem reticular formation)

Ontology Tree: Loaded from BioPortal


FF samples

It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens) Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term
TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000477 (anatomical cluster), sorted by p-values
Analyst: Hideya Kawaji



link to source dataset
human : data

mouse : data

No analysis results