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UBERON:0008987

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Name:renal parenchyma
Namespace:FANTOM
Definition:"The functional tissue of the kidney, consisting of the nephrons." [BTO:0003604]
Xrefs:
links:

BTO:0003604
FMA:15574

SCTID:29704000
Synonyms: "kidney parenchyma" RELATED [BTO:0003604]

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0000353(parenchyma),UBERON:0006554(urinary system structure)
part_of:UBERON:0002113(kidney)



Children

part of:UBERON:0001225 (cortex of kidney)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0008987 (renal parenchyma), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
4.8e-58FFCP PHASE1:Hg19::chr2:693380..693398,+#_974b5cc73974b3b86f4f122e77cb416fp@chr2:693380..693398, +
4.8e-58FFCP PHASE2:Hg19::chr2:693380..693398,+#_974b5cc73974b3b86f4f122e77cb416fp@chr2:693380..693398, +
4.05e-52FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_09dd5b476064868a2a5902cac8597572p7@HOXA10
4.05e-52FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_09dd5b476064868a2a5902cac8597572p7@HOXA10
1.06e-50FFCP PHASE2:Hg19::chr5:74244100..74244117,+#_aca4cfdafca4e042a6059933203d19c8p@chr5:74244100..74244117, +
1.06e-50FFCP PHASE1:Hg19::chr5:74244100..74244117,+#_aca4cfdafca4e042a6059933203d19c8p@chr5:74244100..74244117, +
5.59e-50FFCP PHASE1:Hg19::chr1:20465872..20465881,+#_6b0331ee2d3bbb094079ac2b1905a8d6p2@PLA2G2F
5.59e-50FFCP PHASE2:Hg19::chr1:20465872..20465881,+#_6b0331ee2d3bbb094079ac2b1905a8d6p2@PLA2G2F
6.11e-42FFCP PHASE1:Hg19::chr16:86768403..86768437,+#_d2d322dc9077cd034b865f5444d297f8p@chr16:86768403..86768437, +
6.11e-42FFCP PHASE2:Hg19::chr16:86768403..86768437,+#_d2d322dc9077cd034b865f5444d297f8p@chr16:86768403..86768437, +
3.58e-41FFCP PHASE1:Hg19::chr15:66420804..66420837,-#_03f079e8968d3fec3501af383cb65a0ep4@MEGF11
3.58e-41FFCP PHASE2:Hg19::chr15:66420804..66420837,-#_03f079e8968d3fec3501af383cb65a0ep4@MEGF11
1.0e-40FFCP PHASE1:Hg19::chr1:94713418..94713436,+#_979db6e15be2c4ca48dbab65215b57ebp1@ENST00000413103
1.0e-40FFCP PHASE2:Hg19::chr1:94713418..94713436,+#_979db6e15be2c4ca48dbab65215b57ebp1@ENST00000413103
6.83e-40FFCP PHASE2:Hg19::chr7:140227303..140227330,-#_3954620d7be11f79e42c2bf1aff09684p@chr7:140227303..140227330, -
6.83e-40FFCP PHASE1:Hg19::chr7:140227303..140227330,-#_3954620d7be11f79e42c2bf1aff09684p@chr7:140227303..140227330, -
9.22e-40FFCP PHASE1:Hg19::chr10:102505954..102505973,+#_d374e94412450ef751fcca02d6d08a93p3@PAX2
9.22e-40FFCP PHASE2:Hg19::chr10:102505954..102505973,+#_d374e94412450ef751fcca02d6d08a93p3@PAX2
1.79e-39FFCP PHASE2:Hg19::chr18:3456189..3456200,+#_0172dbdfcd0b0e6e5274fd791d798070p@chr18:3456189..3456200, +
1.79e-39FFCP PHASE1:Hg19::chr18:3456189..3456200,+#_0172dbdfcd0b0e6e5274fd791d798070p@chr18:3456189..3456200, +
4.5e-38FFCP PHASE1:Hg19::chr6:30890456..30890482,+#_f55a4cbc1ede6337e37fd968f3b95d3ep11@VARS2
4.5e-38FFCP PHASE2:Hg19::chr6:30890456..30890482,+#_f55a4cbc1ede6337e37fd968f3b95d3ep11@VARS2
8.61e-38FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_11e731d33d03d74bc5f296d0e6f54531p@chr2:120409486..120409492, +
8.61e-38FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_11e731d33d03d74bc5f296d0e6f54531p@chr2:120409486..120409492, +
5.07e-37FFCP PHASE1:Hg19::chr20:6033532..6033548,-#_c17907f228b24b02be4de33202edc36bp2@AB527789
5.07e-37FFCP PHASE2:Hg19::chr20:6033532..6033548,-#_c17907f228b24b02be4de33202edc36bp2@AB527789
6.37e-37FFCP PHASE2:Hg19::chr1:1100457..1100470,+#_eb41e4a05e94955ce310c82b0109dfa9p@chr1:1100457..1100470, +
6.37e-37FFCP PHASE1:Hg19::chr1:1100457..1100470,+#_eb41e4a05e94955ce310c82b0109dfa9p@chr1:1100457..1100470, +
1.63e-36FFCP PHASE1:Hg19::chr20:6034607..6034616,-#_2ce1052f3a62f68f172e0bbaf87b7d5fp6@LRRN4
1.63e-36FFCP PHASE2:Hg19::chr20:6034607..6034616,-#_2ce1052f3a62f68f172e0bbaf87b7d5fp6@LRRN4
2.81e-35FFCP PHASE2:Hg19::chr17:36104873..36104903,-#_ce36c74265ad089d8ac87255b41bdc98p3@HNF1B
2.81e-35FFCP PHASE1:Hg19::chr17:36104873..36104903,-#_ce36c74265ad089d8ac87255b41bdc98p3@HNF1B
4.37e-35FFCP PHASE2:Hg19::chr9:133986782..133986794,+#_d431d30bad4891ff92c63ebdde17a79ep4@AIF1L
4.37e-35FFCP PHASE1:Hg19::chr9:133986782..133986794,+#_d431d30bad4891ff92c63ebdde17a79ep4@AIF1L
1.19e-34FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_8928d49e7afc4f115f95af2ebfedc99ep4@PAX2
1.19e-34FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_8928d49e7afc4f115f95af2ebfedc99ep4@PAX2
5.98e-34FFCP PHASE2:Hg19::chr5:167718782..167718785,+#_51e069ad5053af4dc42ad91a7165f89cp10@WWC1
5.98e-34FFCP PHASE1:Hg19::chr5:167718782..167718785,+#_51e069ad5053af4dc42ad91a7165f89cp10@WWC1
2.93e-33FFCP PHASE1:Hg19::chr20:6034672..6034714,-#_0178f2477fae4acbabd63fe7ccdfee20p2@LRRN4
2.93e-33FFCP PHASE2:Hg19::chr20:6034672..6034714,-#_0178f2477fae4acbabd63fe7ccdfee20p2@LRRN4
1.44e-32FFCP PHASE1:Hg19::chr16:3068288..3068312,-#_a4316056f476343250b7d18143e9ec49p2@CLDN6
1.44e-32FFCP PHASE2:Hg19::chr16:3068288..3068312,-#_a4316056f476343250b7d18143e9ec49p2@CLDN6
1.85e-32FFCP PHASE2:Hg19::chr20:6034828..6034857,-#_e3b12e68e730ca99dd64dd56d94c8a6ep5@LRRN4
1.85e-32FFCP PHASE1:Hg19::chr20:6034828..6034857,-#_e3b12e68e730ca99dd64dd56d94c8a6ep5@LRRN4
4.69e-32FFCP PHASE1:Hg19::chr7:140227349..140227360,-#_b155a367260af650ecff5132c31e61edp@chr7:140227349..140227360, -
4.69e-32FFCP PHASE2:Hg19::chr7:140227349..140227360,-#_b155a367260af650ecff5132c31e61edp@chr7:140227349..140227360, -
1.23e-31FFCP PHASE1:Hg19::chr17:27970385..27970397,-#_0ea3ee033d5ebfe9181e0494e75e5c58p@chr17:27970385..27970397, -
1.23e-31FFCP PHASE2:Hg19::chr17:27970385..27970397,-#_0ea3ee033d5ebfe9181e0494e75e5c58p@chr17:27970385..27970397, -
2.99e-30FFCP PHASE1:Hg19::chr15:85403302..85403304,+#_f275d0989edb7657c79a950f15c0facep@chr15:85403302..85403304, +
2.99e-30FFCP PHASE2:Hg19::chr15:85403302..85403304,+#_f275d0989edb7657c79a950f15c0facep@chr15:85403302..85403304, +
3.02e-30FFCP PHASE2:Hg19::chr21:41029235..41029269,+#_a5575d31a29c7f7ab539760ecb72e797p2@B3GALT5
3.02e-30FFCP PHASE1:Hg19::chr21:41029235..41029269,+#_a5575d31a29c7f7ab539760ecb72e797p2@B3GALT5
1.06e-29FFCP PHASE1:Hg19::chr19:50390837..50390847,+#_e23f4b0e6cc7372b7713a8f2fbdbd1c5p@chr19:50390837..50390847, +
1.06e-29FFCP PHASE2:Hg19::chr19:50390837..50390847,+#_e23f4b0e6cc7372b7713a8f2fbdbd1c5p@chr19:50390837..50390847, +
1.26e-29FFCP PHASE2:Hg19::chr20:6034576..6034592,-#_13c3e9a1ef8e15fe85b6779be6d18f69p3@LRRN4
1.26e-29FFCP PHASE1:Hg19::chr20:6034576..6034592,-#_13c3e9a1ef8e15fe85b6779be6d18f69p3@LRRN4
1.54e-29FFCP PHASE1:Hg19::chr17:171147..171161,+#_f6dd9168a8557a902915baa5c8e95f50p@chr17:171147..171161, +
1.54e-29FFCP PHASE2:Hg19::chr17:171147..171161,+#_f6dd9168a8557a902915baa5c8e95f50p@chr17:171147..171161, +
3.11e-29FFCP PHASE2:Hg19::chr21:46826248..46826282,-#_954222e7185fe9ce2a64527c287fbceap@chr21:46826248..46826282, -
3.11e-29FFCP PHASE1:Hg19::chr21:46826248..46826282,-#_954222e7185fe9ce2a64527c287fbceap@chr21:46826248..46826282, -
4.34e-29FFCP PHASE1:Hg19::chr1:81001398..81001426,+#_fa43a26a93d73bbd2f55bdf10e9f06dbp1@ENST00000418041, p1@ENST00000443104
4.34e-29FFCP PHASE2:Hg19::chr1:81001398..81001426,+#_fa43a26a93d73bbd2f55bdf10e9f06dbp1@ENST00000418041, p1@ENST00000443104
1.58e-28FFCP PHASE2:Hg19::chr9:133986807..133986821,+#_d9a4efc12a63997b9e23728511f1be17p3@AIF1L
1.58e-28FFCP PHASE1:Hg19::chr9:133986807..133986821,+#_d9a4efc12a63997b9e23728511f1be17p3@AIF1L
2.94e-28FFCP PHASE1:Hg19::chr7:7606139..7606151,-#_afde123f8a6d504f1c7c31539d323069p@chr7:7606139..7606151, -
2.94e-28FFCP PHASE2:Hg19::chr7:7606139..7606151,-#_afde123f8a6d504f1c7c31539d323069p@chr7:7606139..7606151, -
6.08e-28FFCP PHASE2:Hg19::chr10:91043420..91043437,+#_5d41cd698fe66a4c75a6ef4acb9ea9cbp1@ENST00000444849
6.08e-28FFCP PHASE1:Hg19::chr10:91043420..91043437,+#_5d41cd698fe66a4c75a6ef4acb9ea9cbp1@ENST00000444849
1.11e-27FFCP PHASE2:Hg19::chr10:102505493..102505546,+#_ec31b812e3fb1a2f6f1bcb313f76814dp2@PAX2
1.11e-27FFCP PHASE1:Hg19::chr10:102505493..102505546,+#_ec31b812e3fb1a2f6f1bcb313f76814dp2@PAX2
2.09e-27FFCP PHASE1:Hg19::chr9:71735910..71735923,+#_465495ba17953116fb9fc3a5b757c6c3p16@TJP2
2.09e-27FFCP PHASE2:Hg19::chr9:71735910..71735923,+#_465495ba17953116fb9fc3a5b757c6c3p16@TJP2
2.35e-27FFCP PHASE1:Hg19::chr16:86604624..86604648,+#_40365627e0f7d8457821227bf43d97a5p@chr16:86604624..86604648, +
2.35e-27FFCP PHASE2:Hg19::chr16:86604624..86604648,+#_40365627e0f7d8457821227bf43d97a5p@chr16:86604624..86604648, +
3.45e-27FFCP PHASE1:Hg19::chr20:6034598..6034603,-#_d70cd2af82e037751810fd6eca786e7dp7@LRRN4
3.45e-27FFCP PHASE2:Hg19::chr20:6034598..6034603,-#_d70cd2af82e037751810fd6eca786e7dp7@LRRN4
7.25e-27FFCP PHASE2:Hg19::chr17:171082..171101,+#_5b35f1b89ff9fbf4f950d38717185612p@chr17:171082..171101, +
7.25e-27FFCP PHASE1:Hg19::chr17:171082..171101,+#_5b35f1b89ff9fbf4f950d38717185612p@chr17:171082..171101, +
4.96e-26FFCP PHASE1:Hg19::chr20:6033140..6033181,-#_db4d55d569b3dbb6b308483b43ce210fp1@AB527789
4.96e-26FFCP PHASE2:Hg19::chr20:6033140..6033181,-#_db4d55d569b3dbb6b308483b43ce210fp1@AB527789
7.1e-26FFCP PHASE2:Hg19::chr2:108994633..108994650,+#_d91313a646430302d8b06fd05926f54cp4@SULT1C4
7.1e-26FFCP PHASE1:Hg19::chr2:108994633..108994650,+#_d91313a646430302d8b06fd05926f54cp4@SULT1C4
9.68e-25FFCP PHASE2:Hg19::chr6:24358114..24358125,-#_5723d0f09f399202d15c51cef34ecddcp4@DCDC2
9.68e-25FFCP PHASE1:Hg19::chr6:24358114..24358125,-#_5723d0f09f399202d15c51cef34ecddcp4@DCDC2
1.6e-24FFCP PHASE2:Hg19::chr7:27219754..27219759,-#_2642565a43d69257cab09c9abb4b792bp16@HOXA10
1.6e-24FFCP PHASE1:Hg19::chr7:27219754..27219759,-#_2642565a43d69257cab09c9abb4b792bp16@HOXA10
1.6e-24FFCP PHASE2:Hg19::chr2:177053683..177053697,-#_2642565a43d69257cab09c9abb4b792bp1@LOC401022
1.6e-24FFCP PHASE1:Hg19::chr2:177053683..177053697,-#_2642565a43d69257cab09c9abb4b792bp1@LOC401022
1.66e-24FFCP PHASE2:Hg19::chr22:37823036..37823049,-#_af25d73a2593ff529ee41eb99f744304p1@ENST00000451509
1.66e-24FFCP PHASE1:Hg19::chr22:37823036..37823049,-#_af25d73a2593ff529ee41eb99f744304p1@ENST00000451509
1.87e-24FFCP PHASE1:Hg19::chr17:46675539..46675551,-#_ce68bb378f6cfb7cdb8b3c168c4ad69ap7@HOXB6
1.87e-24FFCP PHASE2:Hg19::chr17:46675539..46675551,-#_ce68bb378f6cfb7cdb8b3c168c4ad69ap7@HOXB6
2.63e-24FFCP PHASE1:Hg19::chr13:26619917..26619921,-#_3f1ad3209d27693fb5dadc6ea1fe46c4p@chr13:26619917..26619921, -
2.63e-24FFCP PHASE2:Hg19::chr13:26619917..26619921,-#_3f1ad3209d27693fb5dadc6ea1fe46c4p@chr13:26619917..26619921, -
2.91e-24FFCP PHASE2:Hg19::chr2:177016336..177016350,+#_9631cf3896e231806eae527d184103b4p1@HOXD4
2.91e-24FFCP PHASE1:Hg19::chr2:177016336..177016350,+#_9631cf3896e231806eae527d184103b4p1@HOXD4
2.98e-24FFCP PHASE1:Hg19::chr7:98453821..98453843,-#_8a86de294bf176dd2f89da71fc928fb4p@chr7:98453821..98453843, -
2.98e-24FFCP PHASE2:Hg19::chr7:98453821..98453843,-#_8a86de294bf176dd2f89da71fc928fb4-, p@chr7:98453821..98453843
3.49e-24FFCP PHASE1:Hg19::chr12:6485243..6485254,-#_c0bb02d6ab8ea0c919c5fe48fe945798p18@SCNN1A
3.49e-24FFCP PHASE2:Hg19::chr12:6485243..6485254,-#_c0bb02d6ab8ea0c919c5fe48fe945798p18@SCNN1A