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CL:0002087

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Name:nongranular leukocyte
Namespace:FANTOM
Definition:"A leukocyte that lacks granules." [GOC:tfm]
Xrefs:
links:
FMA:62855
Synonyms: "agranular leukocyte" EXACT []
Created by:tmeehan
Creation date:2010-07-22T11:30:33Z


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:CL:0000738(leukocyte)



Children


is a:CL:0000542 (lymphocyte),CL:0000576 (monocyte),CL:0000842 (mononuclear cell)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

  • 10399-106A3 (acute myeloid leukemia (FAB M5) cell line:THP-1 (fresh))
  • 10400-106A4 (acute myeloid leukemia (FAB M5) cell line:THP-1 (revived))
  • 10405-106A9 (acute myeloid leukemia (FAB M5) cell line:THP-1 (thawed))
  • 10416-106C2 (chronic lymphocytic leukemia (T-CLL) cell line:SKW-3)
  • 10421-106C7 (adult T-cell leukemia cell line:ATN-1)
  • 10422-106C8 (Burkitt's lymphoma cell line:DAUDI)
  • 10427-106D4 (b cell line:RPMI1788)
  • 10429-106D6 (acute lymphoblastic leukemia (T-ALL) cell line:HPB-ALL)
  • 10455-106G5 (acute lymphoblastic leukemia (B-ALL) cell line:BALL-1)
  • 10464-106H5 (acute lymphoblastic leukemia (T-ALL) cell line:Jurkat)

... further results Mouse (Mus musculus)

  • 10399-106A3 (acute myeloid leukemia (FAB M5) cell line:THP-1 (fresh))
  • 10400-106A4 (acute myeloid leukemia (FAB M5) cell line:THP-1 (revived))
  • 10405-106A9 (acute myeloid leukemia (FAB M5) cell line:THP-1 (thawed))
  • 10416-106C2 (chronic lymphocytic leukemia (T-CLL) cell line:SKW-3)
  • 10421-106C7 (adult T-cell leukemia cell line:ATN-1)
  • 10422-106C8 (Burkitt's lymphoma cell line:DAUDI)
  • 10427-106D4 (b cell line:RPMI1788)
  • 10429-106D6 (acute lymphoblastic leukemia (T-ALL) cell line:HPB-ALL)
  • 10455-106G5 (acute lymphoblastic leukemia (B-ALL) cell line:BALL-1)
  • 10464-106H5 (acute lymphoblastic leukemia (T-ALL) cell line:Jurkat)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002087 (nongranular leukocyte), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
6.22e-105FFCP PHASE1:Hg19::chr14:100531693..100531705,+#_8767f3fbe64920498674939ff3aa130ap6@EVL
6.22e-105FFCP PHASE2:Hg19::chr14:100531693..100531705,+#_8767f3fbe64920498674939ff3aa130ap6@EVL
3.55e-98FFCP PHASE2:Hg19::chr14:100531713..100531724,+#_d469e454cf73a0a9051aaf3365e6e675p11@EVL
3.55e-98FFCP PHASE1:Hg19::chr14:100531713..100531724,+#_d469e454cf73a0a9051aaf3365e6e675p11@EVL
5.93e-97FFCP PHASE1:Hg19::chr1:160681573..160681587,-#_37d3b7fe5b38fe1093dc6e2809a00f6bp2@CD48
5.93e-97FFCP PHASE2:Hg19::chr1:160681573..160681587,-#_37d3b7fe5b38fe1093dc6e2809a00f6bp2@CD48
7.03e-95FFCP PHASE2:Hg19::chr19:49842010..49842054,+#_0b68912d2c5488d685eb03171030e1f8p@chr19:49842010..49842054, +
7.03e-95FFCP PHASE1:Hg19::chr19:49842010..49842054,+#_0b68912d2c5488d685eb03171030e1f8p@chr19:49842010..49842054, +
1.93e-94FFCP PHASE1:Hg19::chr1:27952741..27952753,-#_2aa6187702dfaac4ef12daa767dea2d8p8@FGR
1.93e-94FFCP PHASE2:Hg19::chr1:27952741..27952753,-#_2aa6187702dfaac4ef12daa767dea2d8p8@FGR
2.5e-94FFCP PHASE1:Hg19::chr2:24149046..24149063,+#_0ef19b986db3506ca26ef04bc0911512p@chr2:24149046..24149063, +
2.5e-94FFCP PHASE2:Hg19::chr2:24149046..24149063,+#_0ef19b986db3506ca26ef04bc0911512p@chr2:24149046..24149063, +
2.6e-94FFCP PHASE1:Hg19::chr21:46340884..46340893,-#_531fe451f3b3835fe5955d783f279f78p3@ITGB2
2.6e-94FFCP PHASE2:Hg19::chr21:46340884..46340893,-#_531fe451f3b3835fe5955d783f279f78p3@ITGB2
1.47e-92FFCP PHASE1:Hg19::chr16:50776625..50776663,-#_5e7c5cec5871218ca55e9100e57413d6p@chr16:50776625..50776663, -
1.47e-92FFCP PHASE2:Hg19::chr16:50776625..50776663,-#_5e7c5cec5871218ca55e9100e57413d6p@chr16:50776625..50776663, -
2.81e-92FFCP PHASE2:Hg19::chr1:209941862..209941887,+#_740afecc0b4b00e0a8615958724a2174p6@TRAF3IP3
2.81e-92FFCP PHASE1:Hg19::chr1:209941862..209941887,+#_740afecc0b4b00e0a8615958724a2174p6@TRAF3IP3
1.71e-91FFCP PHASE1:Hg19::chr1:27952755..27952769,-#_3a3dc7068b4e33a7dcc6e061403998f8p9@FGR
1.71e-91FFCP PHASE2:Hg19::chr1:27952755..27952769,-#_3a3dc7068b4e33a7dcc6e061403998f8p9@FGR
2.63e-91FFCP PHASE2:Hg19::chr1:9711821..9711832,+#_1fe7d55fc30bd15580d64f4952bd83a8p2@PIK3CD
2.63e-91FFCP PHASE1:Hg19::chr1:9711821..9711832,+#_1fe7d55fc30bd15580d64f4952bd83a8p2@PIK3CD
2.95e-91FFCP PHASE1:Hg19::chr19:49842573..49842602,+#_6c1f0b7706a554a019a2fa2046f09757p@chr19:49842573..49842602, +
2.95e-91FFCP PHASE2:Hg19::chr19:49842573..49842602,+#_6c1f0b7706a554a019a2fa2046f09757p@chr19:49842573..49842602, +
3.26e-91FFCP PHASE1:Hg19::chr1:241695424..241695440,+#_cedcb7912d5771c7363013441e7502dbp2@KMO
3.26e-91FFCP PHASE2:Hg19::chr1:241695424..241695440,+#_cedcb7912d5771c7363013441e7502dbp2@KMO
1.05e-90FFCP PHASE2:Hg19::chr19:18197799..18197815,-#_45409e73125d8953563212da7aed0a3dp2@IL12RB1
1.05e-90FFCP PHASE1:Hg19::chr19:18197799..18197815,-#_45409e73125d8953563212da7aed0a3dp2@IL12RB1
1.13e-90FFCP PHASE1:Hg19::chr2:158300487..158300500,-#_6c32b552cd4d1f7347308b6be5df6ab0p3@CYTIP
1.13e-90FFCP PHASE2:Hg19::chr2:158300487..158300500,-#_6c32b552cd4d1f7347308b6be5df6ab0p3@CYTIP
5.51e-89FFCP PHASE2:Hg19::chr5:149790235..149790248,-#_36435fffb0f516c6f80b0b54533a412ap@chr5:149790235..149790248, -
5.51e-89FFCP PHASE1:Hg19::chr5:149790235..149790248,-#_36435fffb0f516c6f80b0b54533a412ap@chr5:149790235..149790248, -
1.29e-88FFCP PHASE1:Hg19::chr1:203256483..203256503,-#_eccf102b141c2c7fa2a36ab935a4b213p@chr1:203256483..203256503, -
1.29e-88FFCP PHASE2:Hg19::chr1:203256483..203256503,-#_eccf102b141c2c7fa2a36ab935a4b213p@chr1:203256483..203256503, -
1.62e-88FFCP PHASE2:Hg19::chr2:145276968..145276984,+#_3c3354ac6e6cdb7baca4c730f555478dp1@ZEB2-AS1
1.62e-88FFCP PHASE1:Hg19::chr2:145276968..145276984,+#_3c3354ac6e6cdb7baca4c730f555478dp1@ZEB2-AS1
3.1e-88FFCP PHASE2:Hg19::chr19:49843537..49843640,+#_17f003195f8f788deb50fc613a93cb78p@chr19:49843537..49843640, +
3.1e-88FFCP PHASE1:Hg19::chr19:49843537..49843640,+#_17f003195f8f788deb50fc613a93cb78p@chr19:49843537..49843640, +
4.19e-88FFCP PHASE1:Hg19::chr19:49838937..49838974,+#_8c51e8c538758be9425cda10ad821ad1p@chr19:49838937..49838974, +
4.19e-88FFCP PHASE2:Hg19::chr19:49838937..49838974,+#_8c51e8c538758be9425cda10ad821ad1p@chr19:49838937..49838974, +
1.33e-87FFCP PHASE1:Hg19::chr2:68592394..68592405,+#_dc7ab3dd5e25f672221a3f528d57af77p2@PLEK
1.33e-87FFCP PHASE2:Hg19::chr2:68592394..68592405,+#_dc7ab3dd5e25f672221a3f528d57af77p2@PLEK
2.52e-87FFCP PHASE1:Hg19::chr1:206730535..206730549,+#_9047e8100cbb65fcc954a20826d75b95p4@RASSF5
2.52e-87FFCP PHASE2:Hg19::chr1:206730535..206730549,+#_9047e8100cbb65fcc954a20826d75b95p4@RASSF5
2.56e-87FFCP PHASE1:Hg19::chr22:18260077..18260127,+#_e5cecfa7ffd0434fe81791f2b6a97eebp1@LINC00528
2.56e-87FFCP PHASE2:Hg19::chr22:18260077..18260127,+#_e5cecfa7ffd0434fe81791f2b6a97eebp1@LINC00528
3.44e-87FFCP PHASE2:Hg19::chr19:16695359..16695379,+#_80a70f41788d196a9d013bd35721671ep@chr19:16695359..16695379, +
3.44e-87FFCP PHASE1:Hg19::chr19:16695359..16695379,+#_80a70f41788d196a9d013bd35721671ep@chr19:16695359..16695379, +
4.03e-87FFCP PHASE1:Hg19::chr18:48405033..48405061,+#_84ee000c995a5596223949701591492dp3@ME2
4.03e-87FFCP PHASE2:Hg19::chr18:48405033..48405061,+#_84ee000c995a5596223949701591492dp3@ME2
7.88e-87FFCP PHASE2:Hg19::chr2:231090471..231090504,+#_19808a8e1bb630b31e0385e645872566p2@SP140
7.88e-87FFCP PHASE1:Hg19::chr2:231090471..231090504,+#_19808a8e1bb630b31e0385e645872566p2@SP140
1.02e-86FFCP PHASE1:Hg19::chr2:163175430..163175460,-#_c37a9015dc314081a138512cc7a54efbp2@IFIH1
1.02e-86FFCP PHASE2:Hg19::chr2:163175430..163175460,-#_c37a9015dc314081a138512cc7a54efbp2@IFIH1
1.64e-86FFCP PHASE2:Hg19::chr1:31206575..31206590,-#_eb676ec5eb9ee3efe57378f5f83c8171p@chr1:31206575..31206590, -
1.64e-86FFCP PHASE1:Hg19::chr1:31206575..31206590,-#_eb676ec5eb9ee3efe57378f5f83c8171p@chr1:31206575..31206590, -
2.42e-86FFCP PHASE1:Hg19::chr15:73075463..73075507,+#_a3cecceae11d08cc96ae41d149532868p1@LOC100287559
2.42e-86FFCP PHASE2:Hg19::chr15:73075463..73075507,+#_a3cecceae11d08cc96ae41d149532868p1@LOC100287559
2.44e-86FFCP PHASE1:Hg19::chr10:114134954..114135003,+#_59ff3ecd92ac2edb600d868c7e1c2673p5@ACSL5
2.44e-86FFCP PHASE2:Hg19::chr10:114134954..114135003,+#_59ff3ecd92ac2edb600d868c7e1c2673p5@ACSL5
3.68e-86FFCP PHASE2:Hg19::chr6:32577619..32577667,-#_5dbdd1b9e73c23d93e7debe42421920dp@chr6:32577619..32577667, -
3.68e-86FFCP PHASE1:Hg19::chr6:32577619..32577667,-#_5dbdd1b9e73c23d93e7debe42421920dp@chr6:32577619..32577667, -
6.68e-86FFCP PHASE1:Hg19::chr6:32411527..32411547,+#_90bbf33c85a5f403e8e247468cb1d8fbp4@HLA-DRA
6.68e-86FFCP PHASE2:Hg19::chr6:32411527..32411547,+#_90bbf33c85a5f403e8e247468cb1d8fbp4@HLA-DRA
1.09e-85FFCP PHASE2:Hg19::chr19:2085302..2085320,-#_fb7339f8dd00d08202c343d3a558167bp3@MOB3A
1.09e-85FFCP PHASE1:Hg19::chr19:2085302..2085320,-#_fb7339f8dd00d08202c343d3a558167bp3@MOB3A
1.76e-85FFCP PHASE1:Hg19::chr12:9801099..9801138,+#_0eee93a3deb2302f7569d3e995a763c8p5@LOC374443
1.76e-85FFCP PHASE2:Hg19::chr12:9801099..9801138,+#_0eee93a3deb2302f7569d3e995a763c8p5@LOC374443
4.61e-85FFCP PHASE1:Hg19::chr21:46340976..46341000,+#_962998ffe7d878ba2c225f75f9159bf8p1@ENST00000441379, p1@uc002zgh.2
4.61e-85FFCP PHASE2:Hg19::chr21:46340976..46341000,+#_962998ffe7d878ba2c225f75f9159bf8p1@ENST00000441379, p1@uc002zgh.2
5.83e-85FFCP PHASE1:Hg19::chr6:33036875..33036943,-#_ee995fbb3b022abaca00780e1c94ec03p@chr6:33036875..33036943, -
5.83e-85FFCP PHASE2:Hg19::chr6:33036875..33036943,-#_ee995fbb3b022abaca00780e1c94ec03p@chr6:33036875..33036943, -
4.54e-84FFCP PHASE2:Hg19::chr1:198668673..198668721,+#_604526cb1ee2bc6f8e0d9bb910a62180p@chr1:198668673..198668721, +
4.54e-84FFCP PHASE1:Hg19::chr1:198668673..198668721,+#_604526cb1ee2bc6f8e0d9bb910a62180p@chr1:198668673..198668721, +
4.69e-84FFCP PHASE1:Hg19::chr1:161039753..161039765,-#_5488b52b34952bccfd3e7f6658bb5ea2p5@ARHGAP30
4.69e-84FFCP PHASE2:Hg19::chr1:161039753..161039765,-#_5488b52b34952bccfd3e7f6658bb5ea2p5@ARHGAP30
5.1e-84FFCP PHASE2:Hg19::chr6:32412417..32412458,+#_cf5dcfadeba81bf343a1d5e93669f5c1p@chr6:32412417..32412458, +
5.1e-84FFCP PHASE1:Hg19::chr6:32412417..32412458,+#_cf5dcfadeba81bf343a1d5e93669f5c1p@chr6:32412417..32412458, +
7.27e-84FFCP PHASE2:Hg19::chr2:158300517..158300544,-#_716e7f43672dc46241ee9fcd12f0da12p2@CYTIP
7.27e-84FFCP PHASE1:Hg19::chr2:158300517..158300544,-#_716e7f43672dc46241ee9fcd12f0da12p2@CYTIP
8.77e-84FFCP PHASE1:Hg19::chr6:36973449..36973454,+#_82718793f87602b363acf45904bf87d7p4@FGD2
8.77e-84FFCP PHASE2:Hg19::chr6:36973449..36973454,+#_82718793f87602b363acf45904bf87d7p4@FGD2
1.85e-83FFCP PHASE2:Hg19::chrX:48547205..48547222,+#_10de9a61ce4296c069e7ed1aac938974p2@WAS
1.85e-83FFCP PHASE1:Hg19::chrX:48547205..48547222,+#_10de9a61ce4296c069e7ed1aac938974p2@WAS
1.97e-83FFCP PHASE2:Hg19::chr6:33037019..33037047,-#_c1ce918c91f0db87ba15df0b2b2fd4b1p5@HLA-DPA1
1.97e-83FFCP PHASE1:Hg19::chr6:33037019..33037047,-#_c1ce918c91f0db87ba15df0b2b2fd4b1p5@HLA-DPA1
3.03e-83FFCP PHASE1:Hg19::chr9:74920462..74920487,+#_64f50d47b5ccff1b9eed38fc6124ad5ap1@ENST00000451152
3.03e-83FFCP PHASE2:Hg19::chr9:74920462..74920487,+#_64f50d47b5ccff1b9eed38fc6124ad5ap1@ENST00000451152
3.58e-83FFCP PHASE1:Hg19::chr15:45018966..45018983,-#_774c0d93fb913f282d97a69633c98e35p@chr15:45018966..45018983, -
3.58e-83FFCP PHASE2:Hg19::chr15:45018966..45018983,-#_774c0d93fb913f282d97a69633c98e35p@chr15:45018966..45018983, -
3.99e-83FFCP PHASE1:Hg19::chr6:159465957..159465968,-#_cb104ed00c0eb4706a45163db2e4ac52p3@TAGAP
3.99e-83FFCP PHASE2:Hg19::chr6:159465957..159465968,-#_cb104ed00c0eb4706a45163db2e4ac52p3@TAGAP
4.17e-83FFCP PHASE2:Hg19::chr19:1067256..1067270,+#_952e7297722160858674cb38eab4315cp4@HMHA1
4.17e-83FFCP PHASE1:Hg19::chr19:1067256..1067270,+#_952e7297722160858674cb38eab4315cp4@HMHA1
4.94e-83FFCP PHASE2:Hg19::chr7:38389667..38389687,+#_8c4a362dcd0a5d01d469218218b9361fp1@M27346
4.94e-83FFCP PHASE1:Hg19::chr7:38389667..38389687,+#_8c4a362dcd0a5d01d469218218b9361fp1@M27346
7.34e-83FFCP PHASE1:Hg19::chr1:209941889..209941928,+#_25f712982ff72ac1fc2d64d111e51c4bp2@TRAF3IP3
7.34e-83FFCP PHASE2:Hg19::chr1:209941889..209941928,+#_25f712982ff72ac1fc2d64d111e51c4bp2@TRAF3IP3
9.65e-83FFCP PHASE2:Hg19::chr2:128458939..128458961,-#_381806c151b27d302934fb38b9767422p@chr2:128458939..128458961, -
9.65e-83FFCP PHASE1:Hg19::chr2:128458939..128458961,-#_381806c151b27d302934fb38b9767422p@chr2:128458939..128458961, -