DOID:5409: Difference between revisions
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{{DOID | {{DOID | ||
| | |alt_id= | ||
|comment=OMIM mapping confirmed by DO. [SN]. | |comment=OMIM mapping confirmed by DO. [SN]. | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=DOID:5409 | |||
|is_a=DOID:3905 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=lung small cell carcinoma | |||
|namespace=disease_ontology | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo | |property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo | ||
| | |subset= | ||
| | |synonym="Oat cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254633006];;"SCLC" EXACT [CSP2005:2017-6589];;"small cell carcinoma of lung" RELATED [];;"small cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254632001];;"small cell neuroendocrine carcinoma of lung" EXACT [NCI2004_11_17:C4917] | ||
|union_of= | |||
|xref=MSH:D055752;;NCI:C4917;;OMIM:182280;;SNOMEDCT_2010_1_31:254632001;;SNOMEDCT_2010_1_31:254633006;;UMLS_CUI:C0149925 | |||
}} | }} | ||
Revision as of 10:36, 12 September 2014
| Name: | lung small cell carcinoma | ||
|---|---|---|---|
| Namespace: | disease_ontology | ||
| Xrefs: |
| ||
| Synonyms: |
"Oat cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254633006] "SCLC" EXACT [CSP2005:2017-6589] "small cell carcinoma of lung" RELATED [] "small cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254632001] "small cell neuroendocrine carcinoma of lung" EXACT [NCI2004_11_17:C4917] | ||
| Comments: | OMIM mapping confirmed by DO. [SN]. |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | DOID:3905(lung carcinoma) |
|---|
Children
NA
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10462-106H3
- 10468-106H9
- 10502-107C7
- 10503-107C8
- 10504-107C9
- 10505-107D1
- 10506-107D2
- 10524-107F2
- 10525-107F3
- 10526-107F4
... further results Mouse (Mus musculus)
- 10462-106H3
- 10468-106H9
- 10502-107C7
- 10503-107C8
- 10504-107C9
- 10505-107D1
- 10506-107D2
- 10524-107F2
- 10525-107F3
- 10526-107F4
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:5409 (lung small cell carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_5a0cadd9f97072f65b901942816bde31 | p@chr6:125378873..125378876, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_5a0cadd9f97072f65b901942816bde31 | p@chr6:125378873..125378876, + |
| 2.4e-66 | FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_40c90676995a138ba0819dfe8db6fb93 | p@chr8:40525350..40525354, - |
| 2.4e-66 | FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_40c90676995a138ba0819dfe8db6fb93 | p@chr8:40525350..40525354, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:98108427..98108430,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:98108427..98108430, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:39970826..39970832,+#_5be4114e7d0131f457d60e83d77a108d | p@chr8:39970826..39970832, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:97626065..97626084,-#_5be4114e7d0131f457d60e83d77a108d | p@chr2:97626065..97626084, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr10:82723188..82723191,-#_5be4114e7d0131f457d60e83d77a108d | p@chr10:82723188..82723191, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr12:84664687..84664694,+#_5be4114e7d0131f457d60e83d77a108d | p4@ENST00000547882 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr12:58158560..58158567,-#_5be4114e7d0131f457d60e83d77a108d | p@chr12:58158560..58158567, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr3:86289712..86289720,+#_5be4114e7d0131f457d60e83d77a108d | p@chr3:86289712..86289720, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr6:169224860..169224875,+#_5be4114e7d0131f457d60e83d77a108d | p@chr6:169224860..169224875, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr18:39258990..39258996,-#_5be4114e7d0131f457d60e83d77a108d | p@chr18:39258990..39258996, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr7:79840117..79840122,+#_5be4114e7d0131f457d60e83d77a108d | p@chr7:79840117..79840122, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr17:79973593..79973633,-#_5be4114e7d0131f457d60e83d77a108d | p@chr17:79973593..79973633, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr12:84664662..84664670,+#_5be4114e7d0131f457d60e83d77a108d | p3@ENST00000547882 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr10:29213612..29213644,+#_5be4114e7d0131f457d60e83d77a108d | p@chr10:29213612..29213644, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr5:146890999..146891017,-#_5be4114e7d0131f457d60e83d77a108d | p@chr5:146890999..146891017, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:238385078..238385087,-#_5be4114e7d0131f457d60e83d77a108d | p@chr2:238385078..238385087, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr9:226208..226216,-#_5be4114e7d0131f457d60e83d77a108d | p@chr9:226208..226216, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr7:120379758..120379765,+#_5be4114e7d0131f457d60e83d77a108d | p@chr7:120379758..120379765, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:220695661..220695670,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:220695661..220695670, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr7:79840127..79840130,+#_5be4114e7d0131f457d60e83d77a108d | p@chr7:79840127..79840130, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr21:16662950..16662957,-#_5be4114e7d0131f457d60e83d77a108d | p@chr21:16662950..16662957, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr17:79973593..79973633,-#_5be4114e7d0131f457d60e83d77a108d | p@chr17:79973593..79973633, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr12:79756349..79756364,-#_5be4114e7d0131f457d60e83d77a108d | p@chr12:79756349..79756364, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr9:9763035..9763040,-#_5be4114e7d0131f457d60e83d77a108d | p@chr9:9763035..9763040, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:23850222..23850227,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:23850222..23850227, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:57525935..57525942,+#_5be4114e7d0131f457d60e83d77a108d | p@chr8:57525935..57525942, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr4:160189282..160189289,+#_5be4114e7d0131f457d60e83d77a108d | p38@RAPGEF2 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:98108435..98108438,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:98108435..98108438, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:103235211..103235247,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:103235211..103235247, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr6:45399278..45399287,+#_5be4114e7d0131f457d60e83d77a108d | p@chr6:45399278..45399287, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr6:154710410..154710428,-#_5be4114e7d0131f457d60e83d77a108d | p@chr6:154710410..154710428, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr20:54101133..54101144,+#_5be4114e7d0131f457d60e83d77a108d | p@chr20:54101133..54101144, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:100549773..100549807,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:100549773..100549807, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr7:26657673..26657685,-#_5be4114e7d0131f457d60e83d77a108d | p@chr7:26657673..26657685, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr7:79840323..79840338,+#_5be4114e7d0131f457d60e83d77a108d | p@chr7:79840323..79840338, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr4:3838289..3838308,-#_5be4114e7d0131f457d60e83d77a108d | p@chr4:3838289..3838308, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:72275738..72275747,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:72275738..72275747, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr1:144618112..144618116,+#_5be4114e7d0131f457d60e83d77a108d | p4@NBPF8 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr3:86701885..86701893,-#_5be4114e7d0131f457d60e83d77a108d | p@chr3:86701885..86701893, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr19:7834829..7834834,+#_5be4114e7d0131f457d60e83d77a108d | p@chr19:7834829..7834834, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr14:59132994..59133018,+#_5be4114e7d0131f457d60e83d77a108d | p@chr14:59132994..59133018, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:98051049..98051058,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:98051049..98051058, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr10:129704395..129704457,+#_5be4114e7d0131f457d60e83d77a108d | p@chr10:129704395..129704457, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:97961177..97961185,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:97961177..97961185, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr1:168756151..168756165,+#_5be4114e7d0131f457d60e83d77a108d | p2@ENST00000420691 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr4:39301903..39301910,-#_5be4114e7d0131f457d60e83d77a108d | p@chr4:39301903..39301910, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr12:133040060..133040064,+#_5be4114e7d0131f457d60e83d77a108d | p@chr12:133040060..133040064, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr6:64762702..64762707,+#_5be4114e7d0131f457d60e83d77a108d | p@chr6:64762702..64762707, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:98065877..98065881,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:98065877..98065881, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr6:140771120..140771128,+#_5be4114e7d0131f457d60e83d77a108d | p@chr6:140771120..140771128, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr15:71685918..71685922,-#_5be4114e7d0131f457d60e83d77a108d | p@chr15:71685918..71685922, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr1:219599419..219599426,-#_5be4114e7d0131f457d60e83d77a108d | p@chr1:219599419..219599426, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr7:26482694..26482710,-#_5be4114e7d0131f457d60e83d77a108d | p@chr7:26482694..26482710, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr7:120383546..120383560,+#_5be4114e7d0131f457d60e83d77a108d | p@chr7:120383546..120383560, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr3:95401928..95401936,-#_5be4114e7d0131f457d60e83d77a108d | p3@ENST00000494840, p3@uc003dro.1 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:135170047..135170048,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:135170047..135170048, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:57526601..57526612,+#_5be4114e7d0131f457d60e83d77a108d | p@chr8:57526601..57526612, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr6:998897..998898,-#_5be4114e7d0131f457d60e83d77a108d | p@chr6:998897..998898, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr12:15722105..15722121,+#_5be4114e7d0131f457d60e83d77a108d | p@chr12:15722105..15722121, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:103235329..103235342,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:103235329..103235342, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:97962018..97962029,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:97962018..97962029, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr14:36966895..36966899,-#_5be4114e7d0131f457d60e83d77a108d | p@chr14:36966895..36966899, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr6:31681859..31681865,-#_5be4114e7d0131f457d60e83d77a108d | p3@LY6G6E |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:222127471..222127478,-#_5be4114e7d0131f457d60e83d77a108d | p@chr2:222127471..222127478, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr12:51116443..51116452,+#_5be4114e7d0131f457d60e83d77a108d | p@chr12:51116443..51116452, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr11:69640133..69640140,+#_5be4114e7d0131f457d60e83d77a108d | p@chr11:69640133..69640140, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr3:1991867..1991875,-#_5be4114e7d0131f457d60e83d77a108d | p@chr3:1991867..1991875, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:97626442..97626445,-#_5be4114e7d0131f457d60e83d77a108d | p@chr2:97626442..97626445, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr21:38295313..38295326,-#_5be4114e7d0131f457d60e83d77a108d | p@chr21:38295313..38295326, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr4:81460545..81460547,-#_5be4114e7d0131f457d60e83d77a108d | p@chr4:81460545..81460547, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr13:76688920..76688924,+#_5be4114e7d0131f457d60e83d77a108d | p@chr13:76688920..76688924, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:241625475..241625482,+#_5be4114e7d0131f457d60e83d77a108d | p8@ENST00000407635 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr12:65516484..65516493,-#_5be4114e7d0131f457d60e83d77a108d | p@chr12:65516484..65516493, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr10:129703377..129703388,+#_5be4114e7d0131f457d60e83d77a108d | p@chr10:129703377..129703388, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr1:168756303..168756308,+#_5be4114e7d0131f457d60e83d77a108d | p1@MGC4473 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr9:17454052..17454060,+#_5be4114e7d0131f457d60e83d77a108d | p@chr9:17454052..17454060, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr6:23637711..23637717,-#_5be4114e7d0131f457d60e83d77a108d | p@chr6:23637711..23637717, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr3:86703154..86703166,-#_5be4114e7d0131f457d60e83d77a108d | p@chr3:86703154..86703166, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:220594710..220594720,+#_5be4114e7d0131f457d60e83d77a108d | p3@ENST00000442416 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr9:129234745..129234747,-#_5be4114e7d0131f457d60e83d77a108d | p@chr9:129234745..129234747, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr1:100110807..100110818,+#_5be4114e7d0131f457d60e83d77a108d | p@chr1:100110807..100110818, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr14:60958049..60958051,-#_5be4114e7d0131f457d60e83d77a108d | p@chr14:60958049..60958051, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr15:62007373..62007374,-#_5be4114e7d0131f457d60e83d77a108d | p2@ENST00000559590 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:91776712..91776739,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:91776712..91776739, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr17:39140411..39140419,-#_5be4114e7d0131f457d60e83d77a108d | p5@KRT40 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr20:45418126..45418131,-#_5be4114e7d0131f457d60e83d77a108d | p@chr20:45418126..45418131, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr13:76694533..76694542,+#_5be4114e7d0131f457d60e83d77a108d | p@chr13:76694533..76694542, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:97626550..97626562,-#_5be4114e7d0131f457d60e83d77a108d | p@chr2:97626550..97626562, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr11:20362300..20362305,+#_5be4114e7d0131f457d60e83d77a108d | p@chr11:20362300..20362305, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:98075951..98075959,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:98075951..98075959, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:38459926..38459928,+#_5be4114e7d0131f457d60e83d77a108d | p@chr8:38459926..38459928, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr6:44681761..44681769,-#_5be4114e7d0131f457d60e83d77a108d | p@chr6:44681761..44681769, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr14:57127818..57127825,+#_5be4114e7d0131f457d60e83d77a108d | p@chr14:57127818..57127825, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr17:39140411..39140419,-#_5be4114e7d0131f457d60e83d77a108d | p5@KRT40 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr4:6324309..6324314,-#_5be4114e7d0131f457d60e83d77a108d | p43@PPP2R2C |
| 3.1e-50 | FFCP PHASE2:Hg19::chr6:154858693..154858698,+#_5be4114e7d0131f457d60e83d77a108d | p@chr6:154858693..154858698, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr14:60194267..60194275,-#_5be4114e7d0131f457d60e83d77a108d | p20@RTN1 |
