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DOID:5409

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Name:lung small cell carcinoma
Namespace:FANTOM
Xrefs:
links:

MSH:D055752
NCI:C4917
OMIM:182280
SNOMEDCT_2010_1_31:254632001
SNOMEDCT_2010_1_31:254633006

UMLS_CUI:C0149925
Synonyms: "Oat cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254633006]
"SCLC" EXACT [CSP2005:2017-6589]
"small cell carcinoma of lung" RELATED []
"small cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254632001]
"small cell neuroendocrine carcinoma of lung" EXACT [NCI2004_11_17:C4917]
Comments:OMIM mapping confirmed by DO. [SN].

Ontology association
Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.

link to ontology dataset
data


Parents

is_a:DOID:3905(lung carcinoma)



Children
NA


Ontology Tree: Loaded from BioPortal

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:5409 (lung small cell carcinoma), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.55e-98FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_5a0cadd9f97072f65b901942816bde31p@chr6:125378873..125378876, +
1.55e-98FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_5a0cadd9f97072f65b901942816bde31p@chr6:125378873..125378876, +
2.4e-66FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_40c90676995a138ba0819dfe8db6fb93-, p@chr8:40525350..40525354
2.4e-66FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_40c90676995a138ba0819dfe8db6fb93p@chr8:40525350..40525354, -
3.1e-50FFCP PHASE2:Hg19::chr9:9763035..9763040,-#_5be4114e7d0131f457d60e83d77a108dp@chr9:9763035..9763040, -
3.1e-50FFCP PHASE2:Hg19::chr6:140771120..140771128,+#_5be4114e7d0131f457d60e83d77a108dp@chr6:140771120..140771128, +
3.1e-50FFCP PHASE1:Hg19::chrX:10852011..10852021,-#_5be4114e7d0131f457d60e83d77a108dp27@MID1
3.1e-50FFCP PHASE2:Hg19::chr6:998859..998863,-#_5be4114e7d0131f457d60e83d77a108dp@chr6:998859..998863, -
3.1e-50FFCP PHASE1:Hg19::chr8:97961686..97961696,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:97961686..97961696, -
3.1e-50FFCP PHASE1:Hg19::chr3:102635409..102635414,-#_5be4114e7d0131f457d60e83d77a108dp@chr3:102635409..102635414, -
3.1e-50FFCP PHASE1:Hg19::chrX:69542573..69542578,+#_5be4114e7d0131f457d60e83d77a108dp@chrX:69542573..69542578, +
3.1e-50FFCP PHASE2:Hg19::chr8:97972117..97972120,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:97972117..97972120, -
3.1e-50FFCP PHASE2:Hg19::chr10:29212181..29212188,+#_5be4114e7d0131f457d60e83d77a108dp@chr10:29212181..29212188, +
3.1e-50FFCP PHASE1:Hg19::chr6:17845348..17845358,-#_5be4114e7d0131f457d60e83d77a108dp@chr6:17845348..17845358, -
3.1e-50FFCP PHASE2:Hg19::chr7:79839919..79839924,+#_5be4114e7d0131f457d60e83d77a108dp@chr7:79839919..79839924, +
3.1e-50FFCP PHASE1:Hg19::chr10:129703363..129703373,+#_5be4114e7d0131f457d60e83d77a108dp@chr10:129703363..129703373, +
3.1e-50FFCP PHASE1:Hg19::chr9:17457123..17457129,+#_5be4114e7d0131f457d60e83d77a108dp@chr9:17457123..17457129, +
3.1e-50FFCP PHASE2:Hg19::chr8:98070371..98070384,-#_5be4114e7d0131f457d60e83d77a108d-, p@chr8:98070371..98070384
3.1e-50FFCP PHASE1:Hg19::chr16:7428243..7428259,+#_5be4114e7d0131f457d60e83d77a108dp@chr16:7428243..7428259, +
3.1e-50FFCP PHASE1:Hg19::chr11:42142040..42142055,+#_5be4114e7d0131f457d60e83d77a108dp@chr11:42142040..42142055, +
3.1e-50FFCP PHASE2:Hg19::chrX:135761931..135761934,-#_5be4114e7d0131f457d60e83d77a108dp@chrX:135761931..135761934, -
3.1e-50FFCP PHASE1:Hg19::chr13:92571252..92571265,-#_5be4114e7d0131f457d60e83d77a108dp@chr13:92571252..92571265, -
3.1e-50FFCP PHASE2:Hg19::chr14:57127856..57127863,+#_5be4114e7d0131f457d60e83d77a108dp@chr14:57127856..57127863, +
3.1e-50FFCP PHASE1:Hg19::chr3:150914241..150914244,+#_5be4114e7d0131f457d60e83d77a108dp@chr3:150914241..150914244, +
3.1e-50FFCP PHASE1:Hg19::chr15:96959907..96959930,+#_5be4114e7d0131f457d60e83d77a108dp@chr15:96959907..96959930, +
3.1e-50FFCP PHASE2:Hg19::chr10:129703377..129703388,+#_5be4114e7d0131f457d60e83d77a108dp@chr10:129703377..129703388, +
3.1e-50FFCP PHASE1:Hg19::chr17:79974020..79974025,+#_5be4114e7d0131f457d60e83d77a108dp@chr17:79974020..79974025, +
3.1e-50FFCP PHASE1:Hg19::chr7:120383546..120383560,+#_5be4114e7d0131f457d60e83d77a108dp@chr7:120383546..120383560, +
3.1e-50FFCP PHASE2:Hg19::chr14:60194070..60194083,-#_5be4114e7d0131f457d60e83d77a108dp25@RTN1
3.1e-50FFCP PHASE2:Hg19::chr2:103235120..103235130,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:103235120..103235130, +
3.1e-50FFCP PHASE1:Hg19::chr21:43917055..43917058,-#_5be4114e7d0131f457d60e83d77a108dp@chr21:43917055..43917058, -
3.1e-50FFCP PHASE1:Hg19::chr7:39018314..39018323,+#_5be4114e7d0131f457d60e83d77a108dp@chr7:39018314..39018323, +
3.1e-50FFCP PHASE2:Hg19::chr13:25269076..25269105,-#_5be4114e7d0131f457d60e83d77a108dp@chr13:25269076..25269105, -
3.1e-50FFCP PHASE1:Hg19::chr2:241625475..241625482,+#_5be4114e7d0131f457d60e83d77a108dp8@ENST00000407635
3.1e-50FFCP PHASE1:Hg19::chr7:95775942..95775990,-#_5be4114e7d0131f457d60e83d77a108dp@chr7:95775942..95775990, -
3.1e-50FFCP PHASE1:Hg19::chr17:70940275..70940283,+#_5be4114e7d0131f457d60e83d77a108dp@chr17:70940275..70940283, +
3.1e-50FFCP PHASE1:Hg19::chr11:31093041..31093047,-#_5be4114e7d0131f457d60e83d77a108dp@chr11:31093041..31093047, -
3.1e-50FFCP PHASE1:Hg19::chr9:125306070..125306106,+#_5be4114e7d0131f457d60e83d77a108dp@chr9:125306070..125306106, +
3.1e-50FFCP PHASE2:Hg19::chr7:111234799..111234807,-#_5be4114e7d0131f457d60e83d77a108dp@chr7:111234799..111234807, -
3.1e-50FFCP PHASE1:Hg19::chr13:76554315..76554319,+#_5be4114e7d0131f457d60e83d77a108dp@chr13:76554315..76554319, +
3.1e-50FFCP PHASE2:Hg19::chr6:125547084..125547089,+#_5be4114e7d0131f457d60e83d77a108dp@chr6:125547084..125547089, +
3.1e-50FFCP PHASE1:Hg19::chr6:23637684..23637686,-#_5be4114e7d0131f457d60e83d77a108dp@chr6:23637684..23637686, -
3.1e-50FFCP PHASE1:Hg19::chr7:26590606..26590616,-#_5be4114e7d0131f457d60e83d77a108dp@chr7:26590606..26590616, -
3.1e-50FFCP PHASE1:Hg19::chr14:60194459..60194462,-#_5be4114e7d0131f457d60e83d77a108dp43@RTN1
3.1e-50FFCP PHASE1:Hg19::chr2:222127471..222127478,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:222127471..222127478, -
3.1e-50FFCP PHASE2:Hg19::chr12:84664736..84664743,+#_5be4114e7d0131f457d60e83d77a108dp2@ENST00000547882
3.1e-50FFCP PHASE2:Hg19::chr3:1991867..1991875,-#_5be4114e7d0131f457d60e83d77a108dp@chr3:1991867..1991875, -
3.1e-50FFCP PHASE2:Hg19::chr1:100110851..100110860,+#_5be4114e7d0131f457d60e83d77a108dp@chr1:100110851..100110860, +
3.1e-50FFCP PHASE1:Hg19::chr14:25326297..25326305,-#_5be4114e7d0131f457d60e83d77a108dp@chr14:25326297..25326305, -
3.1e-50FFCP PHASE1:Hg19::chr8:39970826..39970832,+#_5be4114e7d0131f457d60e83d77a108dp@chr8:39970826..39970832, +
3.1e-50FFCP PHASE1:Hg19::chr1:144618112..144618116,+#_5be4114e7d0131f457d60e83d77a108dp4@NBPF8
3.1e-50FFCP PHASE2:Hg19::chr19:46531064..46531073,+#_5be4114e7d0131f457d60e83d77a108dp@chr19:46531064..46531073, +
3.1e-50FFCP PHASE2:Hg19::chr12:54535470..54535475,+#_5be4114e7d0131f457d60e83d77a108dp@chr12:54535470..54535475, +
3.1e-50FFCP PHASE2:Hg19::chr9:129291797..129291800,-#_5be4114e7d0131f457d60e83d77a108dp@chr9:129291797..129291800, -
3.1e-50FFCP PHASE1:Hg19::chr2:97626442..97626445,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:97626442..97626445, -
3.1e-50FFCP PHASE2:Hg19::chr11:86502231..86502240,-#_5be4114e7d0131f457d60e83d77a108dp@chr11:86502231..86502240, -
3.1e-50FFCP PHASE1:Hg19::chr6:141460346..141460355,+#_5be4114e7d0131f457d60e83d77a108dp@chr6:141460346..141460355, +
3.1e-50FFCP PHASE2:Hg19::chr5:146890999..146891017,-#_5be4114e7d0131f457d60e83d77a108dp@chr5:146890999..146891017, -
3.1e-50FFCP PHASE1:Hg19::chr14:57021818..57021822,+#_5be4114e7d0131f457d60e83d77a108dp@chr14:57021818..57021822, +
3.1e-50FFCP PHASE2:Hg19::chr21:26151976..26151979,+#_5be4114e7d0131f457d60e83d77a108dp@chr21:26151976..26151979, +
3.1e-50FFCP PHASE1:Hg19::chr1:168756151..168756165,+#_5be4114e7d0131f457d60e83d77a108dp2@ENST00000420691
3.1e-50FFCP PHASE1:Hg19::chr17:59657604..59657621,-#_5be4114e7d0131f457d60e83d77a108dp@chr17:59657604..59657621, -
3.1e-50FFCP PHASE1:Hg19::chr5:33619084..33619089,-#_5be4114e7d0131f457d60e83d77a108dp@chr5:33619084..33619089, -
3.1e-50FFCP PHASE2:Hg19::chr18:39798771..39798780,-#_5be4114e7d0131f457d60e83d77a108dp@chr18:39798771..39798780, -
3.1e-50FFCP PHASE2:Hg19::chr2:241625540..241625541,+#_5be4114e7d0131f457d60e83d77a108dp14@ENST00000407635
3.1e-50FFCP PHASE1:Hg19::chr8:98073725..98073731,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:98073725..98073731, -
3.1e-50FFCP PHASE1:Hg19::chr6:998859..998863,-#_5be4114e7d0131f457d60e83d77a108dp@chr6:998859..998863, -
3.1e-50FFCP PHASE2:Hg19::chr3:86701902..86701920,-#_5be4114e7d0131f457d60e83d77a108dp@chr3:86701902..86701920, -
3.1e-50FFCP PHASE1:Hg19::chr14:60194043..60194066,-#_5be4114e7d0131f457d60e83d77a108dp18@RTN1
3.1e-50FFCP PHASE1:Hg19::chr1:219599419..219599426,-#_5be4114e7d0131f457d60e83d77a108dp@chr1:219599419..219599426, -
3.1e-50FFCP PHASE1:Hg19::chr3:86701902..86701920,-#_5be4114e7d0131f457d60e83d77a108dp@chr3:86701902..86701920, -
3.1e-50FFCP PHASE1:Hg19::chr2:220594730..220594748,+#_5be4114e7d0131f457d60e83d77a108dp2@ENST00000442416
3.1e-50FFCP PHASE1:Hg19::chr5:134920622..134920655,+#_5be4114e7d0131f457d60e83d77a108dp@chr5:134920622..134920655, +
3.1e-50FFCP PHASE2:Hg19::chr2:8803669..8803680,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:8803669..8803680, -
3.1e-50FFCP PHASE2:Hg19::chr2:238385078..238385087,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:238385078..238385087, -
3.1e-50FFCP PHASE2:Hg19::chr14:58448696..58448733,-#_5be4114e7d0131f457d60e83d77a108dp9@SLC35F4
3.1e-50FFCP PHASE2:Hg19::chr2:194837773..194837784,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:194837773..194837784, -
3.1e-50FFCP PHASE2:Hg19::chr6:141715304..141715307,+#_5be4114e7d0131f457d60e83d77a108dp@chr6:141715304..141715307, +
3.1e-50FFCP PHASE1:Hg19::chr7:79840127..79840130,+#_5be4114e7d0131f457d60e83d77a108dp@chr7:79840127..79840130, +
3.1e-50FFCP PHASE2:Hg19::chr2:220594700..220594702,+#_5be4114e7d0131f457d60e83d77a108dp6@ENST00000442416
3.1e-50FFCP PHASE1:Hg19::chr8:98014001..98014041,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:98014001..98014041, -
3.1e-50FFCP PHASE1:Hg19::chr3:115898365..115898379,+#_5be4114e7d0131f457d60e83d77a108dp@chr3:115898365..115898379, +
3.1e-50FFCP PHASE2:Hg19::chr4:39301903..39301910,-#_5be4114e7d0131f457d60e83d77a108dp@chr4:39301903..39301910, -
3.1e-50FFCP PHASE1:Hg19::chr18:39258990..39258996,-#_5be4114e7d0131f457d60e83d77a108dp@chr18:39258990..39258996, -
3.1e-50FFCP PHASE2:Hg19::chr2:130564567..130564572,-#_5be4114e7d0131f457d60e83d77a108dp2@LOC100131048
3.1e-50FFCP PHASE2:Hg19::chr7:79840323..79840338,+#_5be4114e7d0131f457d60e83d77a108dp@chr7:79840323..79840338, +
3.1e-50FFCP PHASE1:Hg19::chr10:129704382..129704389,+#_5be4114e7d0131f457d60e83d77a108dp@chr10:129704382..129704389, +
3.1e-50FFCP PHASE1:Hg19::chr14:58415850..58415853,-#_5be4114e7d0131f457d60e83d77a108dp@chr14:58415850..58415853, -
3.1e-50FFCP PHASE1:Hg19::chr3:78334430..78334433,-#_5be4114e7d0131f457d60e83d77a108dp@chr3:78334430..78334433, -
3.1e-50FFCP PHASE1:Hg19::chr2:208001650..208001675,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:208001650..208001675, -
3.1e-50FFCP PHASE1:Hg19::chr1:100110807..100110818,+#_5be4114e7d0131f457d60e83d77a108dp@chr1:100110807..100110818, +
3.1e-50FFCP PHASE1:Hg19::chr12:79756349..79756364,-#_5be4114e7d0131f457d60e83d77a108dp@chr12:79756349..79756364, -
3.1e-50FFCP PHASE2:Hg19::chr14:58045800..58045814,-#_5be4114e7d0131f457d60e83d77a108dp@chr14:58045800..58045814, -
3.1e-50FFCP PHASE2:Hg19::chr10:129704395..129704457,+#_5be4114e7d0131f457d60e83d77a108dp@chr10:129704395..129704457, +
3.1e-50FFCP PHASE1:Hg19::chr21:16662950..16662957,-#_5be4114e7d0131f457d60e83d77a108dp@chr21:16662950..16662957, -
3.1e-50FFCP PHASE1:Hg19::chr4:3344577..3344588,+#_5be4114e7d0131f457d60e83d77a108dp@chr4:3344577..3344588, +
3.1e-50FFCP PHASE2:Hg19::chr1:81686906..81686911,+#_5be4114e7d0131f457d60e83d77a108dp@chr1:81686906..81686911, +
3.1e-50FFCP PHASE2:Hg19::chr3:145094664..145094665,+#_5be4114e7d0131f457d60e83d77a108dp@chr3:145094664..145094665, +
3.1e-50FFCP PHASE2:Hg19::chr2:192805239..192805246,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:192805239..192805246, +
3.1e-50FFCP PHASE2:Hg19::chr9:95426545..95426559,-#_5be4114e7d0131f457d60e83d77a108dp@chr9:95426545..95426559, -