Personal tools

Difference between revisions of "UBERON:0000007"

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{UBERON |id=UBERON:0000007 |name=pituitary gland |namespace= |def="The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [GO]. ...")
 
Line 21: Line 21:
 
|part_of=UBERON:0001894
 
|part_of=UBERON:0001894
 
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
 
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
 +
|is_obsolete=
 +
|preceded_by=
 
}}
 
}}

Revision as of 08:07, 15 June 2012

Name:pituitary gland
Definition:"The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [GO]. An endocrine gland located ventral to the diencephalon and derived from mixed neuroectodermal and non neuroectodermal origin [ZFIN]." [Wikipedia:Pituitary_gland, ZFIN:curator]
Xrefs:
links:

AAO:0010536
BM:Die-Hy-HY
BTO:0001073
EFO:0000857
EHDAA:2183
EHDAA:4477
EHDAA2:0001471
EMAPA:16647
EMAPA:16898
EV:0100132
FMA:13889
GAID:457
[ 200px-Gray1180.png 200px-Gray1180.png]
MA:0000176
MAT:0000077
MESH:A.06.407.747
MIAA:0000077
ncithesaurus:Pituitary_Gland
NIF_GrossAnatomy:birnlex_1353
OpenCyc:Mx4rv6NQYJwpEbGdrcN5Y29ycA
SCTID:181125003
TAO:0000118
VHOG:0000143
XAO:0000017

ZFA:0000118
Synonyms: "glandula pituitaria" RELATED [BTO:0001073]
"hypophysis" RELATED [ZFA:0000118]
"hypophysis cerebri" RELATED [MA:0000176]
"pituitary" EXACT [BTO:0001073]
"pituitary body" EXACT [BTO:0001073]
Comments:Taxon notes: The lamprey possesses a distinct pituitary organ and hormones, the ascidian does not show distinct evidence of them [Sower S, Freamat M, Kavanaugh S. The origins of the vertebrate hypothalamic窶菟ituitary窶堵onadal (HPG) and hypothalamic窶菟ituitary窶鍍hyroid (HPT) endocrine systems: new insights from lampreys. Gen Comp Endocrinol 2009;161:20-9]
Subset: organ_slim
uberon_slim
vertebrate_core

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0002368(endocrine gland),UBERON:0003296(gland of diencephalon),UBERON:0010133(neuroendocrine gland)
develops_from:UBERON:0000924(ectoderm)
part_of:UBERON:0001894(diencephalon)



Children

derives from:FF:0010162 (human pituitary gland - adult sample),FF:0011303 (mouse pituitary gland- adult sample),FF:0011317 (mouse pituitary gland- embryo E12 sample),FF:0011325 (mouse pituitary gland- embryo E13 sample),FF:0011334 (mouse pituitary gland- embryo E14 sample),FF:0011345 (mouse pituitary gland- embryo E15 sample),FF:0011353 (mouse pituitary gland- embryo E16 sample),FF:0011507 (mouse pituitary gland- neonate N00 sample),FF:0011519 (mouse pituitary gland- embryo E17 sample)
part of:FF:0000114 (mouse pituitary cell),UBERON:0002196 (adenohypophysis)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000007 (pituitary gland), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
3.29e-195FFCP PHASE1:Hg19::chr5:158737729..158737738,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr5:158737729..158737738, -
3.29e-195FFCP PHASE2:Hg19::chr6:22290447..22290450,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr6:22290447..22290450, -
3.29e-195FFCP PHASE1:Hg19::chr17:61995410..61995414,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr17:61995410..61995414, -
3.29e-195FFCP PHASE1:Hg19::chr6:22294730..22294743,-#_47bedeeeae192cbe89ab07ee58e0dcb1p6@PRL
3.29e-195FFCP PHASE2:Hg19::chr17:61996252..61996253,-#_47bedeeeae192cbe89ab07ee58e0dcb1p2@GH1, p3@CSHL1
3.29e-195FFCP PHASE1:Hg19::chrX:9528518..9528536,+#_47bedeeeae192cbe89ab07ee58e0dcb1p@chrX:9528518..9528536, +
3.29e-195FFCP PHASE2:Hg19::chr6:22287695..22287700,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr6:22287695..22287700, -
3.29e-195FFCP PHASE2:Hg19::chr17:61994760..61994767,+#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr17:61994760..61994767, +
3.29e-195FFCP PHASE1:Hg19::chr6:22290447..22290450,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr6:22290447..22290450, -
3.29e-195FFCP PHASE2:Hg19::chr3:87325636..87325643,-#_47bedeeeae192cbe89ab07ee58e0dcb1p2@POU1F1
3.29e-195FFCP PHASE2:Hg19::chr17:61995704..61995739,+#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr17:61995704..61995739, +
3.29e-195FFCP PHASE1:Hg19::chr7:31003621..31003641,+#_47bedeeeae192cbe89ab07ee58e0dcb1p3@GHRHR
3.29e-195FFCP PHASE2:Hg19::chr12:89881337..89881342,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr12:89881337..89881342, -
3.29e-195FFCP PHASE2:Hg19::chr6:22294755..22294768,-#_47bedeeeae192cbe89ab07ee58e0dcb1p9@PRL
3.29e-195FFCP PHASE1:Hg19::chr6:22287695..22287700,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr6:22287695..22287700, -
3.29e-195FFCP PHASE2:Hg19::chrX:54051809..54051811,+#_47bedeeeae192cbe89ab07ee58e0dcb1p@chrX:54051809..54051811, +
3.29e-195FFCP PHASE1:Hg19::chr4:68620100..68620112,-#_47bedeeeae192cbe89ab07ee58e0dcb1p1@GNRHR
3.29e-195FFCP PHASE2:Hg19::chr6:22292828..22292837,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr6:22292828..22292837, -
3.29e-195FFCP PHASE2:Hg19::chr9:135964996..135965001,+#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr9:135964996..135965001, +
3.29e-195FFCP PHASE1:Hg19::chr17:61995906..61995914,-#_47bedeeeae192cbe89ab07ee58e0dcb1p6@AB591020
3.29e-195FFCP PHASE2:Hg19::chr4:68620100..68620112,-#_47bedeeeae192cbe89ab07ee58e0dcb1p1@GNRHR
3.29e-195FFCP PHASE2:Hg19::chr7:31003593..31003614,+#_47bedeeeae192cbe89ab07ee58e0dcb1p2@GHRHR
3.29e-195FFCP PHASE2:Hg19::chr4:1352813..1352818,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr4:1352813..1352818, -
3.29e-195FFCP PHASE1:Hg19::chr8:130017368..130017390,+#_47bedeeeae192cbe89ab07ee58e0dcb1+, p@chr8:130017368..130017390
3.29e-195FFCP PHASE2:Hg19::chr5:158737729..158737738,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr5:158737729..158737738, -
3.29e-195FFCP PHASE2:Hg19::chr2:25391425..25391439,-#_47bedeeeae192cbe89ab07ee58e0dcb1p10@POMC
3.29e-195FFCP PHASE2:Hg19::chr6:22287768..22287781,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr6:22287768..22287781, -
3.29e-195FFCP PHASE1:Hg19::chr6:22292828..22292837,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr6:22292828..22292837, -
3.29e-195FFCP PHASE2:Hg19::chr17:61996018..61996019,-#_47bedeeeae192cbe89ab07ee58e0dcb1p5@AB591020
3.29e-195FFCP PHASE2:Hg19::chrX:9528518..9528536,+#_47bedeeeae192cbe89ab07ee58e0dcb1p@chrX:9528518..9528536, +
3.29e-195FFCP PHASE2:Hg19::chr19:49519357..49519372,-#_47bedeeeae192cbe89ab07ee58e0dcb1p1@CU678753
3.29e-195FFCP PHASE1:Hg19::chr6:22287768..22287781,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr6:22287768..22287781, -
3.29e-195FFCP PHASE2:Hg19::chr17:61995371..61995384,+#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr17:61995371..61995384, +
3.29e-195FFCP PHASE2:Hg19::chr3:4774755..4774765,+#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr3:4774755..4774765, +
3.29e-195FFCP PHASE2:Hg19::chr6:22294718..22294725,-#_47bedeeeae192cbe89ab07ee58e0dcb1p11@PRL
3.29e-195FFCP PHASE1:Hg19::chr8:1066886..1066919,+#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr8:1066886..1066919, +
3.29e-195FFCP PHASE1:Hg19::chr17:61996160..61996176,-#_47bedeeeae192cbe89ab07ee58e0dcb1p3@GH1
3.29e-195FFCP PHASE1:Hg19::chr19:49519357..49519372,-#_47bedeeeae192cbe89ab07ee58e0dcb1p1@CU678753
3.29e-195FFCP PHASE1:Hg19::chr17:61995432..61995458,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr17:61995432..61995458, -
3.29e-195FFCP PHASE1:Hg19::chr3:118521917..118521922,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr3:118521917..118521922, -
3.29e-195FFCP PHASE2:Hg19::chr11:70178863..70178874,+#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr11:70178863..70178874, +
3.29e-195FFCP PHASE1:Hg19::chr6:22294755..22294768,-#_47bedeeeae192cbe89ab07ee58e0dcb1p9@PRL
3.29e-195FFCP PHASE2:Hg19::chr17:61996393..61996421,-#_47bedeeeae192cbe89ab07ee58e0dcb1p4@CSHL1, p4@GH1
3.29e-195FFCP PHASE1:Hg19::chr4:1352813..1352818,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr4:1352813..1352818, -
3.29e-195FFCP PHASE2:Hg19::chr6:22287710..22287718,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr6:22287710..22287718, -
3.29e-195FFCP PHASE2:Hg19::chr3:154042775..154042780,-#_47bedeeeae192cbe89ab07ee58e0dcb1p8@DHX36
3.29e-195FFCP PHASE2:Hg19::chr17:61994797..61994839,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr17:61994797..61994839, -
3.29e-195FFCP PHASE1:Hg19::chr16:21049173..21049231,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr16:21049173..21049231, -
3.29e-195FFCP PHASE2:Hg19::chr2:211830430..211830435,+#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr2:211830430..211830435, +
3.29e-195FFCP PHASE1:Hg19::chr7:31006649..31006651,+#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr7:31006649..31006651, +
3.29e-195FFCP PHASE1:Hg19::chr20:58401898..58401905,+#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr20:58401898..58401905, +
3.29e-195FFCP PHASE1:Hg19::chrX:54051809..54051811,+#_47bedeeeae192cbe89ab07ee58e0dcb1p@chrX:54051809..54051811, +
3.29e-195FFCP PHASE1:Hg19::chr9:135964996..135965001,+#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr9:135964996..135965001, +
3.29e-195FFCP PHASE2:Hg19::chr12:89881348..89881356,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr12:89881348..89881356, -
3.29e-195FFCP PHASE1:Hg19::chr6:22287710..22287718,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr6:22287710..22287718, -
3.29e-195FFCP PHASE1:Hg19::chr17:61995979..61995990,-#_47bedeeeae192cbe89ab07ee58e0dcb1p2@AB591020
3.29e-195FFCP PHASE2:Hg19::chr7:31003621..31003641,+#_47bedeeeae192cbe89ab07ee58e0dcb1p3@GHRHR
3.29e-195FFCP PHASE1:Hg19::chr1:240043364..240043366,+#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr1:240043364..240043366, +
3.29e-195FFCP PHASE2:Hg19::chr6:22287787..22287798,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr6:22287787..22287798, -
3.29e-195FFCP PHASE1:Hg19::chr17:61995207..61995219,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr17:61995207..61995219, -
3.29e-195FFCP PHASE2:Hg19::chr17:61996155..61996158,-#_47bedeeeae192cbe89ab07ee58e0dcb1p5@GH1
3.29e-195FFCP PHASE2:Hg19::chr17:18021982..18021985,+#_47bedeeeae192cbe89ab07ee58e0dcb1p3@MYO15A
3.29e-195FFCP PHASE2:Hg19::chr6:22287619..22287636,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr6:22287619..22287636, -
3.29e-195FFCP PHASE2:Hg19::chr19:49519519..49519562,-#_47bedeeeae192cbe89ab07ee58e0dcb1p2@CU678753
3.29e-195FFCP PHASE1:Hg19::chr6:22287787..22287798,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr6:22287787..22287798, -
3.29e-195FFCP PHASE2:Hg19::chr17:61995410..61995414,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr17:61995410..61995414, -
3.29e-195FFCP PHASE1:Hg19::chr3:154042775..154042780,-#_47bedeeeae192cbe89ab07ee58e0dcb1p8@DHX36
3.29e-195FFCP PHASE1:Hg19::chr6:22287619..22287636,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr6:22287619..22287636, -
3.29e-195FFCP PHASE1:Hg19::chr19:49519519..49519562,-#_47bedeeeae192cbe89ab07ee58e0dcb1p2@CU678753
3.29e-195FFCP PHASE1:Hg19::chr8:126582844..126582849,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr8:126582844..126582849, -
3.29e-195FFCP PHASE1:Hg19::chr7:31003560..31003576,+#_47bedeeeae192cbe89ab07ee58e0dcb1p5@GHRHR
3.29e-195FFCP PHASE1:Hg19::chr2:7497646..7497649,+#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr2:7497646..7497649, +
3.29e-195FFCP PHASE2:Hg19::chr2:25391815..25391821,-#_47bedeeeae192cbe89ab07ee58e0dcb1p13@POMC
3.29e-195FFCP PHASE2:Hg19::chr6:22290492..22290497,+#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr6:22290492..22290497, +
3.29e-195FFCP PHASE2:Hg19::chr3:130248877..130248886,+#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr3:130248877..130248886, +
3.29e-195FFCP PHASE1:Hg19::chr17:61995480..61995499,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr17:61995480..61995499, -
3.29e-195FFCP PHASE2:Hg19::chr6:22287720..22287725,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr6:22287720..22287725, -
3.29e-195FFCP PHASE1:Hg19::chr17:61994613..61994649,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr17:61994613..61994649, -
3.29e-195FFCP PHASE1:Hg19::chr6:22290492..22290497,+#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr6:22290492..22290497, +
3.29e-195FFCP PHASE2:Hg19::chr17:61995906..61995914,-#_47bedeeeae192cbe89ab07ee58e0dcb1p6@AB591020
3.29e-195FFCP PHASE2:Hg19::chr2:211830446..211830457,+#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr2:211830446..211830457, +
3.29e-195FFCP PHASE1:Hg19::chr7:31006831..31006834,+#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr7:31006831..31006834, +
3.29e-195FFCP PHASE2:Hg19::chr8:130017368..130017390,+#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr8:130017368..130017390, +
3.29e-195FFCP PHASE1:Hg19::chr3:87325636..87325643,-#_47bedeeeae192cbe89ab07ee58e0dcb1p2@POU1F1
3.29e-195FFCP PHASE1:Hg19::chr6:22287720..22287725,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr6:22287720..22287725, -
3.29e-195FFCP PHASE1:Hg19::chr3:130248877..130248886,+#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr3:130248877..130248886, +
3.29e-195FFCP PHASE2:Hg19::chr2:7497646..7497649,+#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr2:7497646..7497649, +
3.29e-195FFCP PHASE1:Hg19::chr2:25391425..25391439,-#_47bedeeeae192cbe89ab07ee58e0dcb1p10@POMC
3.29e-195FFCP PHASE1:Hg19::chr17:61995995..61996002,-#_47bedeeeae192cbe89ab07ee58e0dcb1p3@AB591020
3.29e-195FFCP PHASE2:Hg19::chr7:31006649..31006651,+#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr7:31006649..31006651, +
3.29e-195FFCP PHASE2:Hg19::chr6:22287815..22287820,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr6:22287815..22287820, -
3.29e-195FFCP PHASE1:Hg19::chr2:211830430..211830435,+#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr2:211830430..211830435, +
3.29e-195FFCP PHASE1:Hg19::chr17:61995220..61995244,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr17:61995220..61995244, -
3.29e-195FFCP PHASE2:Hg19::chr17:61996160..61996176,-#_47bedeeeae192cbe89ab07ee58e0dcb1p3@GH1
3.29e-195FFCP PHASE2:Hg19::chr6:22287647..22287662,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr6:22287647..22287662, -
3.29e-195FFCP PHASE1:Hg19::chr12:89881337..89881342,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr12:89881337..89881342, -
3.29e-195FFCP PHASE1:Hg19::chr19:7979665..7979675,+#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr19:7979665..7979675, +
3.29e-195FFCP PHASE1:Hg19::chr6:22287815..22287820,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr6:22287815..22287820, -
3.29e-195FFCP PHASE2:Hg19::chr17:61995432..61995458,-#_47bedeeeae192cbe89ab07ee58e0dcb1p@chr17:61995432..61995458, -
3.29e-195FFCP PHASE1:Hg19::chr7:31003580..31003589,+#_47bedeeeae192cbe89ab07ee58e0dcb1p6@GHRHR