FFCP PHASE1:Hg19::chr3:42892842..42892866,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:42892842..42892866,+ | |||
|description=CAGE_peak_at_chr3:42892842..42892866,+ | |description=CAGE_peak_at_chr3:42892842..42892866,+ | ||
|id=chr3:42892842..42892866,+ | |id=chr3:42892842..42892866,+ | ||
|ontology_enrichment_celltype=CL:0002334!2.05e-07!12;CL:0002541!3.42e-07!3;CL:0002615!5.55e-07!3;CL:0002579!9.27e-07!3;CL:0002580!9.45e-07!3 | |ontology_enrichment_celltype=CL:0002334!2.05e-07!12;CL:0002541!3.42e-07!3;CL:0002615!5.55e-07!3;CL:0002579!9.27e-07!3;CL:0002580!9.45e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.24e-14;12!CL:0000136;4.82e-14;13!CL:0002541;7.49e-13;3!CL:0002615;1.89e-12;3!CL:0002579;4.87e-12;3!CL:0002580;9.52e-12;3!CL:0002617;3.72e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.05e-14,12;CL:0002541,8.13e-13,3;CL:0002615,2.13e-12,3;CL:0000136,5.17e-12,15;CL:0002579,5.89e-12,3;CL:0002580,6.12e-12,3;CL:0002617,3.58e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.01e-15!115;UBERON:0009569!2.12e-12!113;UBERON:0003688!4.27e-12!6;UBERON:0002358!4.27e-12!6;UBERON:0003684!4.27e-12!6;UBERON:0001178!4.27e-12!6;UBERON:0002417!2.84e-08!61;UBERON:0000916!2.84e-08!61;UBERON:0000466!3.33e-08!126;UBERON:0001443!7.17e-08!11;UBERON:0000476!3.42e-07!3;UBERON:0000920!3.42e-07!3;UBERON:0004457!4.37e-07!12;UBERON:0000042!4.37e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;9.68e-23;6!UBERON:0002358;9.68e-23;6!UBERON:0003684;9.68e-23;6!UBERON:0001178;9.68e-23;6!UBERON:0004457;6.17e-15;9!UBERON:0000042;6.17e-15;9!UBERON:0003124;7.49e-13;3!UBERON:0000920;7.49e-13;3!UBERON:0000310;2.02e-09;10!UBERON:0005406;3.50e-09;2!UBERON:0001443;1.57e-08;11!UBERON:0003127;2.51e-08;2!UBERON:0000341;5.23e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.32e-22,6;UBERON:0002358,1.32e-22,6;UBERON:0003684,1.32e-22,6;UBERON:0001178,1.32e-22,6;UBERON:0000920,8.13e-13,3;UBERON:0004457,5.79e-11,12;UBERON:0000042,5.79e-11,12;UBERON:0009569,8.51e-11,112;UBERON:0000310,1.61e-09,10;UBERON:0005406,3.31e-09,2;UBERON:0003124,3.45e-09,7;UBERON:0001443,1.27e-08,11;UBERON:0003127,3.38e-08,2;UBERON:0000341,7.52e-08,2 | |||
|phase1_expression=13.4442000660212,3.8538094300377,11.5582611358696,2.00146596706261,2.68176656656373,4.36169262050184,2.53299878168311,0,0,0.737201809504527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,0,0,0,0,0.486634870302636,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33888245105868,0.805658634218294,3.80136052859256,2.68468263302986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.288732895522148,0,0.951270761172991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0994328148232,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601892199455438,0,0,0,0,0,0,0,0,0,0,0,0,0,8.18755765801964,1.84154367945675,1.40330047216537,5.38184426873944,2.55853624533352,1.12597744800525,11.8734453155993,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,10.7959076883203,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.811367035427949,0,0,0,1.46508179271894,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0.597743964753209,1.10513566212459,0,0,0,0,0.539210106883961,0,0,1.08507746200627,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.692552326534174,0,0,0,0,7.33702667383415,3.75550132947635,11.1937302963913,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884575645033392,1.83309043480088,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,2.41981432097328,0,1.76922422959766,0,0,0,0,0,0,0,0,0,0,0,1.7472666824203,0,0,0,0,1.06687918137261,0,0.451961481561065,0,0,0,0,0.881747022766871,0.85381197895741,0.19980960958213,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,1.11712960508902,0.229160424011684,0,0,0.858452096273142,0.223171457441873,1.47803639470798,0,0,0.157566364614447,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.681909645754975,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,2.63794020620548,3.97520666736664,0,0,0,0,0.533937062838473,1.41483874589699,0.828478110694391,0.992332043623902,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,3.39681591877069,0.219284049578707,0,0.578742114812744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526472298444801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50794029276486,0,0,0,0,0,0,0.549451649953598,0,0,1.82631744101899,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,2.71733118420012,0.385870790539723,0.874238242015829,0,0.735444965261716,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0.458729283404541,0,0,0,0,1.0580536810308,0,0,0.432626562123789,0,0,0,0,0,0,0,0.378893491091197,0.267964130156178,0,0,1.0661699095049,1.42838658878244,0,0.124149428591716,0,2.92776928079559,4.04234377916439,1.30630048738177,1.02669990325584,0.942928742204225,1.14755528628282,2.32862249582209,0,0,0,0,2.34640942403454,1.4668973301944,0.406896178315738,0.665756774185513,2.21401172950129,0 | |phase1_expression=13.4442000660212,3.8538094300377,11.5582611358696,2.00146596706261,2.68176656656373,4.36169262050184,2.53299878168311,0,0,0.737201809504527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,0,0,0,0,0.486634870302636,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33888245105868,0.805658634218294,3.80136052859256,2.68468263302986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.288732895522148,0,0.951270761172991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0994328148232,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601892199455438,0,0,0,0,0,0,0,0,0,0,0,0,0,8.18755765801964,1.84154367945675,1.40330047216537,5.38184426873944,2.55853624533352,1.12597744800525,11.8734453155993,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,10.7959076883203,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.811367035427949,0,0,0,1.46508179271894,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0.597743964753209,1.10513566212459,0,0,0,0,0.539210106883961,0,0,1.08507746200627,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.692552326534174,0,0,0,0,7.33702667383415,3.75550132947635,11.1937302963913,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884575645033392,1.83309043480088,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,2.41981432097328,0,1.76922422959766,0,0,0,0,0,0,0,0,0,0,0,1.7472666824203,0,0,0,0,1.06687918137261,0,0.451961481561065,0,0,0,0,0.881747022766871,0.85381197895741,0.19980960958213,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,1.11712960508902,0.229160424011684,0,0,0.858452096273142,0.223171457441873,1.47803639470798,0,0,0.157566364614447,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.681909645754975,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,2.63794020620548,3.97520666736664,0,0,0,0,0.533937062838473,1.41483874589699,0.828478110694391,0.992332043623902,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,3.39681591877069,0.219284049578707,0,0.578742114812744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526472298444801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50794029276486,0,0,0,0,0,0,0.549451649953598,0,0,1.82631744101899,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,2.71733118420012,0.385870790539723,0.874238242015829,0,0.735444965261716,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0.458729283404541,0,0,0,0,1.0580536810308,0,0,0.432626562123789,0,0,0,0,0,0,0,0.378893491091197,0.267964130156178,0,0,1.0661699095049,1.42838658878244,0,0.124149428591716,0,2.92776928079559,4.04234377916439,1.30630048738177,1.02669990325584,0.942928742204225,1.14755528628282,2.32862249582209,0,0,0,0,2.34640942403454,1.4668973301944,0.406896178315738,0.665756774185513,2.21401172950129,0 | ||
|short_description=p@chr3:42892842..42892866,+ | |short_description=p@chr3:42892842..42892866,+ | ||
}} | }} |
Latest revision as of 21:05, 29 July 2015
Short description: | p@chr3:42892842..42892866, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:42892842..42892866, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.05e-14 | 12 |
chorionic membrane mesenchymal stem cell | 8.13e-13 | 3 |
adipocyte of omentum tissue | 2.13e-12 | 3 |
fat cell | 5.17e-12 | 15 |
omentum preadipocyte | 5.89e-12 | 3 |
preadipocyte of the breast | 6.12e-12 | 3 |
adipocyte of breast | 3.58e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.32e-22 | 6 |
peritoneum | 1.32e-22 | 6 |
abdominal cavity | 1.32e-22 | 6 |
visceral peritoneum | 1.32e-22 | 6 |
egg chorion | 8.13e-13 | 3 |
cavity lining | 5.79e-11 | 12 |
serous membrane | 5.79e-11 | 12 |
subdivision of trunk | 8.51e-11 | 112 |
breast | 1.61e-09 | 10 |
perirenal fat | 3.31e-09 | 2 |
chorion | 3.45e-09 | 7 |
chest | 1.27e-08 | 11 |
open tracheal system trachea | 3.38e-08 | 2 |
throat | 7.52e-08 | 2 |