FFCP PHASE1:Hg19::chr13:23500789..23500796,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002322!2.16e-10!5;CL:0001014!9.24e-08!2;CL:0001016!9.24e-08!2;CL:0000242!1.33e-07!2 | |ontology_enrichment_celltype=CL:0002322!2.16e-10!5;CL:0001014!9.24e-08!2;CL:0001016!9.24e-08!2;CL:0000242!1.33e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0001014;2.19e-12;2!CL:0001016;2.19e-12;2!CL:0000123;3.06e-12;2!CL:0000650;3.06e-12;2!CL:1000500;3.06e-12;2!CL:1000618;3.06e-12;2!CL:1001318;3.06e-12;2!CL:0002173;3.06e-12;2!CL:0000242;3.06e-12;2!CL:0000322;1.08e-08;3!CL:0000669;9.36e-07;4 | |ontology_enrichment_celltype_v019=CL:0001014;2.19e-12;2!CL:0001016;2.19e-12;2!CL:0000123;3.06e-12;2!CL:0000650;3.06e-12;2!CL:1000500;3.06e-12;2!CL:1000618;3.06e-12;2!CL:1001318;3.06e-12;2!CL:0002173;3.06e-12;2!CL:0000242;3.06e-12;2!CL:0000322;1.08e-08;3!CL:0000669;9.36e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0001014,2.07e-12,2;CL:0001016,2.07e-12,2;CL:0000242,2.59e-12,2;CL:0000650,3.62e-12,2;CL:1000500,3.62e-12,2;CL:1000618,3.62e-12,2;CL:1001318,3.62e-12,2;CL:0002173,3.62e-12,2;CL:0000322,1.12e-08,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:5093!8.18e-09!4;DOID:1612!8.18e-09!4 | |ontology_enrichment_disease=DOID:5093!8.18e-09!4;DOID:1612!8.18e-09!4 | ||
|ontology_enrichment_disease_v019=DOID:5093;1.59e-50;4!DOID:1612;1.59e-50;4!DOID:3910;2.19e-12;2!DOID:299;1.06e-08;25 | |ontology_enrichment_disease_v019=DOID:5093;1.59e-50;4!DOID:1612;1.59e-50;4!DOID:3910;2.19e-12;2!DOID:299;1.06e-08;25 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,1.59e-50,4;DOID:1612,1.59e-50,4;DOID:3910,2.32e-12,2;DOID:299,1.06e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0003135!3.37e-07!11;UBERON:0000058!5.97e-07!26;UBERON:0003887!8.60e-07!21 | |ontology_enrichment_uberon=UBERON:0003135!3.37e-07!11;UBERON:0000058!5.97e-07!26;UBERON:0003887!8.60e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0000310;9.82e-21;10!UBERON:0001443;6.40e-19;11!UBERON:0004903;2.19e-12;2!UBERON:0002173;2.19e-12;2!UBERON:0002186;2.19e-12;2!UBERON:0003567;3.06e-12;2!UBERON:0003838;3.06e-12;2!UBERON:0003586;3.06e-12;2!UBERON:0005169;3.06e-12;2!UBERON:0002321;3.06e-12;2!UBERON:0005215;3.06e-12;2!UBERON:0002303;3.06e-12;2!UBERON:0002319;3.06e-12;2!UBERON:0004821;1.08e-08;3!UBERON:0007499;1.08e-08;3!UBERON:0003215;1.08e-08;3!UBERON:0010368;1.08e-08;3!UBERON:0009911;1.08e-08;3!UBERON:0002299;1.08e-08;3!UBERON:0006524;1.08e-08;3!UBERON:0008874;1.08e-08;3!UBERON:0002169;1.08e-08;3!UBERON:0004894;1.08e-08;3!UBERON:0009856;7.91e-07;4!UBERON:0003891;9.36e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0000310;9.82e-21;10!UBERON:0001443;6.40e-19;11!UBERON:0004903;2.19e-12;2!UBERON:0002173;2.19e-12;2!UBERON:0002186;2.19e-12;2!UBERON:0003567;3.06e-12;2!UBERON:0003838;3.06e-12;2!UBERON:0003586;3.06e-12;2!UBERON:0005169;3.06e-12;2!UBERON:0002321;3.06e-12;2!UBERON:0005215;3.06e-12;2!UBERON:0002303;3.06e-12;2!UBERON:0002319;3.06e-12;2!UBERON:0004821;1.08e-08;3!UBERON:0007499;1.08e-08;3!UBERON:0003215;1.08e-08;3!UBERON:0010368;1.08e-08;3!UBERON:0009911;1.08e-08;3!UBERON:0002299;1.08e-08;3!UBERON:0006524;1.08e-08;3!UBERON:0008874;1.08e-08;3!UBERON:0002169;1.08e-08;3!UBERON:0004894;1.08e-08;3!UBERON:0009856;7.91e-07;4!UBERON:0003891;9.36e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,9.82e-21,10;UBERON:0001443,6.40e-19,11;UBERON:0004903,2.32e-12,2;UBERON:0002173,2.32e-12,2;UBERON:0002186,2.32e-12,2;UBERON:0003567,3.62e-12,2;UBERON:0003838,3.62e-12,2;UBERON:0003586,3.62e-12,2;UBERON:0005169,3.62e-12,2;UBERON:0002321,3.62e-12,2;UBERON:0005215,3.62e-12,2;UBERON:0002303,3.62e-12,2;UBERON:0002319,3.62e-12,2;UBERON:0004821,1.12e-08,3;UBERON:0003215,1.12e-08,3;UBERON:0010368,1.12e-08,3;UBERON:0009911,1.12e-08,3;UBERON:0002299,1.12e-08,3;UBERON:0006524,1.12e-08,3;UBERON:0008874,1.12e-08,3;UBERON:0002169,1.12e-08,3;UBERON:0004894,1.12e-08,3;UBERON:0000915,3.12e-07,52 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.464775771478074,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.3216351836742,3.43394464837949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,1.00337954770971,0.509752546090077,0.831076008928724,0,0,0,0,0.656029291399411,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.85454387689793,0,0,0,2.03402920234213,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599428828746391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,2.32140586367385,0,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.276697269872462,0,0,0,0,1.87333962322753,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0,0.463044948647668,0,0,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0.177404740325278,0,0,0,0,0,0,0.078493092850514,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.227336094654718,0.535928260312357,0,0,0,0,0,0,0.112131862580613,0,0.404234377916439,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr13:23500789..23500796,+ | |short_description=p@chr13:23500789..23500796,+ | ||
}} | }} |
Revision as of 15:09, 17 November 2012
Short description: | p@chr13:23500789..23500796, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:23500789..23500796, + |
Coexpression cluster: | C262_breast_MCF7_skeletal_Reticulocytes_mucinous_hepatoblastoma_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 2.07e-12 | 2 |
immature CD1a-positive Langerhans cell | 2.07e-12 | 2 |
Merkel cell | 2.59e-12 | 2 |
mesangial cell | 3.62e-12 | 2 |
kidney interstitial cell | 3.62e-12 | 2 |
juxtaglomerular complex cell | 3.62e-12 | 2 |
renal interstitial pericyte | 3.62e-12 | 2 |
extraglomerular mesangial cell | 3.62e-12 | 2 |
pneumocyte | 1.12e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
breast | 9.82e-21 | 10 |
chest | 6.40e-19 | 11 |
bronchoalveolar duct junction | 2.32e-12 | 2 |
alveolar duct | 2.32e-12 | 2 |
bronchiole | 2.32e-12 | 2 |
abdomen connective tissue | 3.62e-12 | 2 |
abdominal segment connective tissue | 3.62e-12 | 2 |
trunk connective tissue | 3.62e-12 | 2 |
interstitial tissue | 3.62e-12 | 2 |
extraglomerular mesangium | 3.62e-12 | 2 |
kidney interstitium | 3.62e-12 | 2 |
juxtaglomerular apparatus | 3.62e-12 | 2 |
mesangium | 3.62e-12 | 2 |
pulmonary alveolus epithelium | 1.12e-08 | 3 |
alveolus | 1.12e-08 | 3 |
pulmonary lobule | 1.12e-08 | 3 |
lobule | 1.12e-08 | 3 |
alveolus of lung | 1.12e-08 | 3 |
alveolar system | 1.12e-08 | 3 |
pulmonary acinus | 1.12e-08 | 3 |
alveolar sac | 1.12e-08 | 3 |
alveolar wall | 1.12e-08 | 3 |
thoracic segment of trunk | 3.12e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.59e-50 | 4 |
breast cancer | 1.59e-50 | 4 |
lung adenocarcinoma | 2.32e-12 | 2 |
adenocarcinoma | 1.06e-08 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.