DOID:5409: Difference between revisions
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{{DOID | {{DOID | ||
| | |alt_id= | ||
|comment=OMIM mapping confirmed by DO. [SN]. | |comment=OMIM mapping confirmed by DO. [SN]. | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=DOID:5409 | |||
|is_a=DOID:3905 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=lung small cell carcinoma | |||
|namespace=disease_ontology | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo | |property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo | ||
| | |subset= | ||
| | |synonym="Oat cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254633006];;"SCLC" EXACT [CSP2005:2017-6589];;"small cell carcinoma of lung" RELATED [];;"small cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254632001];;"small cell neuroendocrine carcinoma of lung" EXACT [NCI2004_11_17:C4917] | ||
|union_of= | |||
|xref=MSH:D055752;;NCI:C4917;;OMIM:182280;;SNOMEDCT_2010_1_31:254632001;;SNOMEDCT_2010_1_31:254633006;;UMLS_CUI:C0149925 | |||
}} | }} | ||
Revision as of 10:36, 12 September 2014
| Name: | lung small cell carcinoma | ||
|---|---|---|---|
| Namespace: | disease_ontology | ||
| Xrefs: |
| ||
| Synonyms: |
"Oat cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254633006] "SCLC" EXACT [CSP2005:2017-6589] "small cell carcinoma of lung" RELATED [] "small cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254632001] "small cell neuroendocrine carcinoma of lung" EXACT [NCI2004_11_17:C4917] | ||
| Comments: | OMIM mapping confirmed by DO. [SN]. |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | DOID:3905(lung carcinoma) |
|---|
Children
NA
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10462-106H3
- 10468-106H9
- 10502-107C7
- 10503-107C8
- 10504-107C9
- 10505-107D1
- 10506-107D2
- 10524-107F2
- 10525-107F3
- 10526-107F4
... further results Mouse (Mus musculus)
- 10462-106H3
- 10468-106H9
- 10502-107C7
- 10503-107C8
- 10504-107C9
- 10505-107D1
- 10506-107D2
- 10524-107F2
- 10525-107F3
- 10526-107F4
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:5409 (lung small cell carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_5a0cadd9f97072f65b901942816bde31 | p@chr6:125378873..125378876, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_5a0cadd9f97072f65b901942816bde31 | p@chr6:125378873..125378876, + |
| 2.4e-66 | FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_40c90676995a138ba0819dfe8db6fb93 | p@chr8:40525350..40525354, - |
| 2.4e-66 | FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_40c90676995a138ba0819dfe8db6fb93 | p@chr8:40525350..40525354, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr6:169224860..169224875,+#_5be4114e7d0131f457d60e83d77a108d | p@chr6:169224860..169224875, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr14:58045800..58045814,-#_5be4114e7d0131f457d60e83d77a108d | p@chr14:58045800..58045814, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr19:46763803..46763808,-#_5be4114e7d0131f457d60e83d77a108d | p@chr19:46763803..46763808, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr18:37420947..37420953,+#_5be4114e7d0131f457d60e83d77a108d | p@chr18:37420947..37420953, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr3:145094664..145094665,+#_5be4114e7d0131f457d60e83d77a108d | p@chr3:145094664..145094665, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr16:83649482..83649491,+#_5be4114e7d0131f457d60e83d77a108d | p@chr16:83649482..83649491, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr13:92569013..92569022,-#_5be4114e7d0131f457d60e83d77a108d | p@chr13:92569013..92569022, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr10:129703392..129703416,+#_5be4114e7d0131f457d60e83d77a108d | p@chr10:129703392..129703416, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr16:7411388..7411391,+#_5be4114e7d0131f457d60e83d77a108d | p@chr16:7411388..7411391, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr7:120379758..120379765,+#_5be4114e7d0131f457d60e83d77a108d | p@chr7:120379758..120379765, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:220695661..220695670,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:220695661..220695670, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:97964849..97964868,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:97964849..97964868, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr7:120378721..120378730,-#_5be4114e7d0131f457d60e83d77a108d | p@chr7:120378721..120378730, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr15:97554594..97554599,-#_5be4114e7d0131f457d60e83d77a108d | p@chr15:97554594..97554599, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr3:86929211..86929219,+#_5be4114e7d0131f457d60e83d77a108d | p@chr3:86929211..86929219, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:220607845..220607848,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:220607845..220607848, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:135119636..135119642,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:135119636..135119642, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr14:60194331..60194336,-#_5be4114e7d0131f457d60e83d77a108d | p36@RTN1 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:98103977..98103981,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:98103977..98103981, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr12:79756320..79756329,-#_5be4114e7d0131f457d60e83d77a108d | p@chr12:79756320..79756329, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:98075951..98075959,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:98075951..98075959, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:38459926..38459928,+#_5be4114e7d0131f457d60e83d77a108d | p@chr8:38459926..38459928, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:97625602..97625628,-#_5be4114e7d0131f457d60e83d77a108d | p@chr2:97625602..97625628, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr12:84664596..84664600,+#_5be4114e7d0131f457d60e83d77a108d | p@chr12:84664596..84664600, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr12:27925654..27925663,-#_5be4114e7d0131f457d60e83d77a108d | p@chr12:27925654..27925663, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr12:41194014..41194019,+#_5be4114e7d0131f457d60e83d77a108d | p@chr12:41194014..41194019, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr18:33311016..33311032,-#_5be4114e7d0131f457d60e83d77a108d | p@chr18:33311016..33311032, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:100549773..100549807,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:100549773..100549807, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr7:26657673..26657685,-#_5be4114e7d0131f457d60e83d77a108d | p@chr7:26657673..26657685, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:121815999..121816003,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:121815999..121816003, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr7:26590606..26590616,-#_5be4114e7d0131f457d60e83d77a108d | p@chr7:26590606..26590616, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr13:25269257..25269262,+#_5be4114e7d0131f457d60e83d77a108d | p@chr13:25269257..25269262, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:72275738..72275747,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:72275738..72275747, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr3:86701885..86701893,-#_5be4114e7d0131f457d60e83d77a108d | p@chr3:86701885..86701893, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr19:7834829..7834834,+#_5be4114e7d0131f457d60e83d77a108d | p@chr19:7834829..7834834, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr4:169849979..169849990,-#_5be4114e7d0131f457d60e83d77a108d | p@chr4:169849979..169849990, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:130568628..130568649,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:130568628..130568649, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr14:59113338..59113345,+#_5be4114e7d0131f457d60e83d77a108d | p@chr14:59113338..59113345, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:98015654..98015697,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:98015654..98015697, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:98015305..98015315,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:98015305..98015315, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr21:16662950..16662957,-#_5be4114e7d0131f457d60e83d77a108d | p@chr21:16662950..16662957, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr7:79839919..79839924,+#_5be4114e7d0131f457d60e83d77a108d | p@chr7:79839919..79839924, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr10:129710296..129710320,-#_5be4114e7d0131f457d60e83d77a108d | p@chr10:129710296..129710320, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:97626375..97626385,-#_5be4114e7d0131f457d60e83d77a108d | p@chr2:97626375..97626385, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chrX:135764624..135764645,-#_5be4114e7d0131f457d60e83d77a108d | p@chrX:135764624..135764645, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr7:95766200..95766209,-#_5be4114e7d0131f457d60e83d77a108d | p@chr7:95766200..95766209, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:23850222..23850227,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:23850222..23850227, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr6:39526005..39526014,-#_5be4114e7d0131f457d60e83d77a108d | p@chr6:39526005..39526014, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:175412075..175412078,+#_5be4114e7d0131f457d60e83d77a108d | p3@uc002uix.1 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr6:45399278..45399287,+#_5be4114e7d0131f457d60e83d77a108d | p@chr6:45399278..45399287, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr6:154710410..154710428,-#_5be4114e7d0131f457d60e83d77a108d | p@chr6:154710410..154710428, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr5:28572013..28572023,-#_5be4114e7d0131f457d60e83d77a108d | p@chr5:28572013..28572023, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr17:63528638..63528642,+#_5be4114e7d0131f457d60e83d77a108d | p@chr17:63528638..63528642, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:57526601..57526612,+#_5be4114e7d0131f457d60e83d77a108d | p@chr8:57526601..57526612, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr6:998897..998898,-#_5be4114e7d0131f457d60e83d77a108d | p@chr6:998897..998898, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr9:226208..226216,-#_5be4114e7d0131f457d60e83d77a108d | p@chr9:226208..226216, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr6:998859..998863,-#_5be4114e7d0131f457d60e83d77a108d | p@chr6:998859..998863, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:103235329..103235342,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:103235329..103235342, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr3:77129779..77129782,+#_5be4114e7d0131f457d60e83d77a108d | p@chr3:77129779..77129782, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr14:59132994..59133018,+#_5be4114e7d0131f457d60e83d77a108d | p@chr14:59132994..59133018, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:103235132..103235142,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:103235132..103235142, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:97961449..97961460,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:97961449..97961460, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:68113370..68113379,-#_5be4114e7d0131f457d60e83d77a108d | p@chr2:68113370..68113379, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr12:76206813..76206837,-#_5be4114e7d0131f457d60e83d77a108d | p@chr12:76206813..76206837, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr10:129704201..129704232,-#_5be4114e7d0131f457d60e83d77a108d | p@chr10:129704201..129704232, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr4:39301903..39301910,-#_5be4114e7d0131f457d60e83d77a108d | p@chr4:39301903..39301910, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr7:138721040..138721056,+#_5be4114e7d0131f457d60e83d77a108d | p@chr7:138721040..138721056, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr4:37653629..37653673,-#_5be4114e7d0131f457d60e83d77a108d | p@chr4:37653629..37653673, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr9:125306070..125306106,+#_5be4114e7d0131f457d60e83d77a108d | p@chr9:125306070..125306106, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr12:84664700..84664710,+#_5be4114e7d0131f457d60e83d77a108d | p1@ENST00000547882 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr6:140771120..140771128,+#_5be4114e7d0131f457d60e83d77a108d | p@chr6:140771120..140771128, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr12:46124855..46124858,+#_5be4114e7d0131f457d60e83d77a108d | p@chr12:46124855..46124858, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr7:26482694..26482710,-#_5be4114e7d0131f457d60e83d77a108d | p@chr7:26482694..26482710, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr16:50553120..50553126,-#_5be4114e7d0131f457d60e83d77a108d | p@chr16:50553120..50553126, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:72275738..72275747,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:72275738..72275747, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:192805413..192805418,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:192805413..192805418, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr20:45418126..45418131,-#_5be4114e7d0131f457d60e83d77a108d | p@chr20:45418126..45418131, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr10:129704473..129704478,+#_5be4114e7d0131f457d60e83d77a108d | p@chr10:129704473..129704478, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr13:76563913..76563916,+#_5be4114e7d0131f457d60e83d77a108d | p@chr13:76563913..76563916, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr10:121863383..121863387,-#_5be4114e7d0131f457d60e83d77a108d | p@chr10:121863383..121863387, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr9:97856010..97856019,+#_5be4114e7d0131f457d60e83d77a108d | p@chr9:97856010..97856019, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr6:31681859..31681865,-#_5be4114e7d0131f457d60e83d77a108d | p3@LY6G6E |
| 3.1e-50 | FFCP PHASE2:Hg19::chr9:9763035..9763040,-#_5be4114e7d0131f457d60e83d77a108d | p@chr9:9763035..9763040, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:222127471..222127478,-#_5be4114e7d0131f457d60e83d77a108d | p@chr2:222127471..222127478, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr18:73967160..73967162,-#_5be4114e7d0131f457d60e83d77a108d | p@chr18:73967160..73967162, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr3:95401649..95401655,-#_5be4114e7d0131f457d60e83d77a108d | p3@ENST00000463799 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:98108435..98108438,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:98108435..98108438, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr3:1991867..1991875,-#_5be4114e7d0131f457d60e83d77a108d | p@chr3:1991867..1991875, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr21:38295313..38295326,-#_5be4114e7d0131f457d60e83d77a108d | p@chr21:38295313..38295326, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr6:125547084..125547089,+#_5be4114e7d0131f457d60e83d77a108d | p@chr6:125547084..125547089, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr18:10085799..10085809,+#_5be4114e7d0131f457d60e83d77a108d | p@chr18:10085799..10085809, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr5:146890999..146891017,-#_5be4114e7d0131f457d60e83d77a108d | p@chr5:146890999..146891017, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr3:194808375..194808396,+#_5be4114e7d0131f457d60e83d77a108d | p@chr3:194808375..194808396, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr10:29213480..29213487,-#_5be4114e7d0131f457d60e83d77a108d | p@chr10:29213480..29213487, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr4:81460545..81460547,-#_5be4114e7d0131f457d60e83d77a108d | p@chr4:81460545..81460547, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:100549773..100549807,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:100549773..100549807, - |
