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DOID:5409

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Name:lung small cell carcinoma
Namespace:FANTOM
Xrefs:
links:

MSH:D055752
NCI:C4917
OMIM:182280
SNOMEDCT_2010_1_31:254632001
SNOMEDCT_2010_1_31:254633006

UMLS_CUI:C0149925
Synonyms: "Oat cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254633006]
"SCLC" EXACT [CSP2005:2017-6589]
"small cell carcinoma of lung" RELATED []
"small cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254632001]
"small cell neuroendocrine carcinoma of lung" EXACT [NCI2004_11_17:C4917]
Comments:OMIM mapping confirmed by DO. [SN].

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:DOID:3905(lung carcinoma)



Children
NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:5409 (lung small cell carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
1.55e-98FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_5a0cadd9f97072f65b901942816bde31p@chr6:125378873..125378876, +
1.55e-98FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_5a0cadd9f97072f65b901942816bde31p@chr6:125378873..125378876, +
2.4e-66FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_40c90676995a138ba0819dfe8db6fb93p@chr8:40525350..40525354, -
2.4e-66FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_40c90676995a138ba0819dfe8db6fb93p@chr8:40525350..40525354, -
3.1e-50FFCP PHASE2:Hg19::chr14:58448696..58448733,-#_5be4114e7d0131f457d60e83d77a108dp9@SLC35F4
3.1e-50FFCP PHASE1:Hg19::chr8:98014001..98014041,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:98014001..98014041, -
3.1e-50FFCP PHASE1:Hg19::chr6:39526005..39526014,-#_5be4114e7d0131f457d60e83d77a108dp@chr6:39526005..39526014, -
3.1e-50FFCP PHASE2:Hg19::chr8:97965705..97965721,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:97965705..97965721, -
3.1e-50FFCP PHASE1:Hg19::chr2:175412075..175412078,+#_5be4114e7d0131f457d60e83d77a108dp3@uc002uix.1
3.1e-50FFCP PHASE1:Hg19::chrX:135761931..135761934,-#_5be4114e7d0131f457d60e83d77a108dp@chrX:135761931..135761934, -
3.1e-50FFCP PHASE1:Hg19::chr7:95766136..95766143,-#_5be4114e7d0131f457d60e83d77a108dp@chr7:95766136..95766143, -
3.1e-50FFCP PHASE2:Hg19::chrX:135761770..135761786,-#_5be4114e7d0131f457d60e83d77a108dp@chrX:135761770..135761786, -
3.1e-50FFCP PHASE1:Hg19::chr2:241625621..241625629,+#_5be4114e7d0131f457d60e83d77a108dp2@ENST00000407635
3.1e-50FFCP PHASE1:Hg19::chr17:59657604..59657621,-#_5be4114e7d0131f457d60e83d77a108dp@chr17:59657604..59657621, -
3.1e-50FFCP PHASE1:Hg19::chr12:54535470..54535475,+#_5be4114e7d0131f457d60e83d77a108dp@chr12:54535470..54535475, +
3.1e-50FFCP PHASE2:Hg19::chr16:13010571..13010578,+#_5be4114e7d0131f457d60e83d77a108dp@chr16:13010571..13010578, +
3.1e-50FFCP PHASE2:Hg19::chr6:44681761..44681769,-#_5be4114e7d0131f457d60e83d77a108dp@chr6:44681761..44681769, -
3.1e-50FFCP PHASE1:Hg19::chr14:58439259..58439262,-#_5be4114e7d0131f457d60e83d77a108dp@chr14:58439259..58439262, -
3.1e-50FFCP PHASE2:Hg19::chr13:104517168..104517170,+#_5be4114e7d0131f457d60e83d77a108dp@chr13:104517168..104517170, +
3.1e-50FFCP PHASE1:Hg19::chr3:150914094..150914095,+#_5be4114e7d0131f457d60e83d77a108dp@chr3:150914094..150914095, +
3.1e-50FFCP PHASE2:Hg19::chr17:70940275..70940283,+#_5be4114e7d0131f457d60e83d77a108dp@chr17:70940275..70940283, +
3.1e-50FFCP PHASE1:Hg19::chr2:222160774..222160804,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:222160774..222160804, +
3.1e-50FFCP PHASE1:Hg19::chr2:138685510..138685520,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:138685510..138685520, -
3.1e-50FFCP PHASE2:Hg19::chr3:150914192..150914197,+#_5be4114e7d0131f457d60e83d77a108dp@chr3:150914192..150914197, +
3.1e-50FFCP PHASE1:Hg19::chr12:88178319..88178329,-#_5be4114e7d0131f457d60e83d77a108dp2@MKRN9P
3.1e-50FFCP PHASE2:Hg19::chr13:92569013..92569022,-#_5be4114e7d0131f457d60e83d77a108dp@chr13:92569013..92569022, -
3.1e-50FFCP PHASE2:Hg19::chr10:129703377..129703388,+#_5be4114e7d0131f457d60e83d77a108dp@chr10:129703377..129703388, +
3.1e-50FFCP PHASE2:Hg19::chrX:10852011..10852021,-#_5be4114e7d0131f457d60e83d77a108dp27@MID1
3.1e-50FFCP PHASE2:Hg19::chr15:97554594..97554599,-#_5be4114e7d0131f457d60e83d77a108dp@chr15:97554594..97554599, -
3.1e-50FFCP PHASE1:Hg19::chr8:54464033..54464036,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:54464033..54464036, -
3.1e-50FFCP PHASE1:Hg19::chr2:189756256..189756260,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:189756256..189756260, +
3.1e-50FFCP PHASE1:Hg19::chr18:39258990..39258996,-#_5be4114e7d0131f457d60e83d77a108dp@chr18:39258990..39258996, -
3.1e-50FFCP PHASE1:Hg19::chr14:58045730..58045732,-#_5be4114e7d0131f457d60e83d77a108dp@chr14:58045730..58045732, -
3.1e-50FFCP PHASE2:Hg19::chr2:97626580..97626585,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:97626580..97626585, -
3.1e-50FFCP PHASE2:Hg19::chr21:43917055..43917058,-#_5be4114e7d0131f457d60e83d77a108dp@chr21:43917055..43917058, -
3.1e-50FFCP PHASE2:Hg19::chr3:102635374..102635381,-#_5be4114e7d0131f457d60e83d77a108dp@chr3:102635374..102635381, -
3.1e-50FFCP PHASE2:Hg19::chr17:59657604..59657621,-#_5be4114e7d0131f457d60e83d77a108dp@chr17:59657604..59657621, -
3.1e-50FFCP PHASE1:Hg19::chr7:120378742..120378768,-#_5be4114e7d0131f457d60e83d77a108dp@chr7:120378742..120378768, -
3.1e-50FFCP PHASE2:Hg19::chr9:17457123..17457129,+#_5be4114e7d0131f457d60e83d77a108dp@chr9:17457123..17457129, +
3.1e-50FFCP PHASE2:Hg19::chr8:73794113..73794122,+#_5be4114e7d0131f457d60e83d77a108dp@chr8:73794113..73794122, +
3.1e-50FFCP PHASE1:Hg19::chr15:97503439..97503472,+#_5be4114e7d0131f457d60e83d77a108dp@chr15:97503439..97503472, +
3.1e-50FFCP PHASE2:Hg19::chr4:157516018..157516023,+#_5be4114e7d0131f457d60e83d77a108dp@chr4:157516018..157516023, +
3.1e-50FFCP PHASE2:Hg19::chr14:58045800..58045814,-#_5be4114e7d0131f457d60e83d77a108dp@chr14:58045800..58045814, -
3.1e-50FFCP PHASE1:Hg19::chr12:84664662..84664670,+#_5be4114e7d0131f457d60e83d77a108dp3@ENST00000547882
3.1e-50FFCP PHASE1:Hg19::chr5:146890999..146891017,-#_5be4114e7d0131f457d60e83d77a108dp@chr5:146890999..146891017, -
3.1e-50FFCP PHASE1:Hg19::chr2:238385078..238385087,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:238385078..238385087, -
3.1e-50FFCP PHASE2:Hg19::chr7:120379758..120379765,+#_5be4114e7d0131f457d60e83d77a108dp@chr7:120379758..120379765, +
3.1e-50FFCP PHASE2:Hg19::chr2:220695661..220695670,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:220695661..220695670, +
3.1e-50FFCP PHASE1:Hg19::chr8:98108427..98108430,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:98108427..98108430, -
3.1e-50FFCP PHASE1:Hg19::chr8:39970826..39970832,+#_5be4114e7d0131f457d60e83d77a108dp@chr8:39970826..39970832, +
3.1e-50FFCP PHASE2:Hg19::chr8:98103977..98103981,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:98103977..98103981, -
3.1e-50FFCP PHASE2:Hg19::chr2:97626065..97626084,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:97626065..97626084, -
3.1e-50FFCP PHASE2:Hg19::chr12:84664687..84664694,+#_5be4114e7d0131f457d60e83d77a108dp4@ENST00000547882
3.1e-50FFCP PHASE1:Hg19::chr12:58158560..58158567,-#_5be4114e7d0131f457d60e83d77a108dp@chr12:58158560..58158567, -
3.1e-50FFCP PHASE1:Hg19::chr10:129704395..129704457,+#_5be4114e7d0131f457d60e83d77a108dp@chr10:129704395..129704457, +
3.1e-50FFCP PHASE1:Hg19::chr3:86289712..86289720,+#_5be4114e7d0131f457d60e83d77a108dp@chr3:86289712..86289720, +
3.1e-50FFCP PHASE2:Hg19::chr6:169224860..169224875,+#_5be4114e7d0131f457d60e83d77a108dp@chr6:169224860..169224875, +
3.1e-50FFCP PHASE2:Hg19::chr18:39258990..39258996,-#_5be4114e7d0131f457d60e83d77a108dp@chr18:39258990..39258996, -
3.1e-50FFCP PHASE1:Hg19::chr7:79840117..79840122,+#_5be4114e7d0131f457d60e83d77a108dp@chr7:79840117..79840122, +
3.1e-50FFCP PHASE1:Hg19::chr17:79973593..79973633,-#_5be4114e7d0131f457d60e83d77a108dp@chr17:79973593..79973633, -
3.1e-50FFCP PHASE1:Hg19::chr1:144618112..144618116,+#_5be4114e7d0131f457d60e83d77a108dp4@NBPF8
3.1e-50FFCP PHASE2:Hg19::chr3:86701885..86701893,-#_5be4114e7d0131f457d60e83d77a108dp@chr3:86701885..86701893, -
3.1e-50FFCP PHASE2:Hg19::chr19:7834829..7834834,+#_5be4114e7d0131f457d60e83d77a108dp@chr19:7834829..7834834, +
3.1e-50FFCP PHASE2:Hg19::chr14:59132994..59133018,+#_5be4114e7d0131f457d60e83d77a108dp@chr14:59132994..59133018, +
3.1e-50FFCP PHASE1:Hg19::chr8:98051049..98051058,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:98051049..98051058, -
3.1e-50FFCP PHASE2:Hg19::chr8:98015654..98015697,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:98015654..98015697, -
3.1e-50FFCP PHASE2:Hg19::chr7:79840127..79840130,+#_5be4114e7d0131f457d60e83d77a108dp@chr7:79840127..79840130, +
3.1e-50FFCP PHASE2:Hg19::chr21:16662950..16662957,-#_5be4114e7d0131f457d60e83d77a108dp@chr21:16662950..16662957, -
3.1e-50FFCP PHASE2:Hg19::chr17:79973593..79973633,-#_5be4114e7d0131f457d60e83d77a108dp@chr17:79973593..79973633, -
3.1e-50FFCP PHASE2:Hg19::chr12:79756349..79756364,-#_5be4114e7d0131f457d60e83d77a108dp@chr12:79756349..79756364, -
3.1e-50FFCP PHASE2:Hg19::chr7:95776211..95776254,-#_5be4114e7d0131f457d60e83d77a108dp@chr7:95776211..95776254, -
3.1e-50FFCP PHASE2:Hg19::chr2:23850222..23850227,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:23850222..23850227, +
3.1e-50FFCP PHASE1:Hg19::chr8:57525935..57525942,+#_5be4114e7d0131f457d60e83d77a108dp@chr8:57525935..57525942, +
3.1e-50FFCP PHASE1:Hg19::chr4:160189282..160189289,+#_5be4114e7d0131f457d60e83d77a108dp38@RAPGEF2
3.1e-50FFCP PHASE1:Hg19::chr2:103235211..103235247,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:103235211..103235247, +
3.1e-50FFCP PHASE2:Hg19::chr6:45399278..45399287,+#_5be4114e7d0131f457d60e83d77a108dp@chr6:45399278..45399287, +
3.1e-50FFCP PHASE2:Hg19::chr6:154710410..154710428,-#_5be4114e7d0131f457d60e83d77a108dp@chr6:154710410..154710428, -
3.1e-50FFCP PHASE1:Hg19::chr20:54101133..54101144,+#_5be4114e7d0131f457d60e83d77a108dp@chr20:54101133..54101144, +
3.1e-50FFCP PHASE2:Hg19::chr7:26657673..26657685,-#_5be4114e7d0131f457d60e83d77a108dp@chr7:26657673..26657685, -
3.1e-50FFCP PHASE1:Hg19::chr7:79840323..79840338,+#_5be4114e7d0131f457d60e83d77a108dp@chr7:79840323..79840338, +
3.1e-50FFCP PHASE1:Hg19::chr4:3838289..3838308,-#_5be4114e7d0131f457d60e83d77a108dp@chr4:3838289..3838308, -
3.1e-50FFCP PHASE1:Hg19::chr8:97962018..97962029,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:97962018..97962029, -
3.1e-50FFCP PHASE1:Hg19::chr14:36966895..36966899,-#_5be4114e7d0131f457d60e83d77a108dp@chr14:36966895..36966899, -
3.1e-50FFCP PHASE2:Hg19::chr10:129704395..129704457,+#_5be4114e7d0131f457d60e83d77a108dp@chr10:129704395..129704457, +
3.1e-50FFCP PHASE1:Hg19::chr10:66459172..66459188,-#_5be4114e7d0131f457d60e83d77a108dp@chr10:66459172..66459188, -
3.1e-50FFCP PHASE1:Hg19::chr1:168756151..168756165,+#_5be4114e7d0131f457d60e83d77a108dp2@ENST00000420691
3.1e-50FFCP PHASE2:Hg19::chr4:39301903..39301910,-#_5be4114e7d0131f457d60e83d77a108dp@chr4:39301903..39301910, -
3.1e-50FFCP PHASE2:Hg19::chr12:133040060..133040064,+#_5be4114e7d0131f457d60e83d77a108dp@chr12:133040060..133040064, +
3.1e-50FFCP PHASE1:Hg19::chr6:64762702..64762707,+#_5be4114e7d0131f457d60e83d77a108dp@chr6:64762702..64762707, +
3.1e-50FFCP PHASE2:Hg19::chr9:125306070..125306106,+#_5be4114e7d0131f457d60e83d77a108dp@chr9:125306070..125306106, +
3.1e-50FFCP PHASE2:Hg19::chr6:140771120..140771128,+#_5be4114e7d0131f457d60e83d77a108dp@chr6:140771120..140771128, +
3.1e-50FFCP PHASE1:Hg19::chr15:71685918..71685922,-#_5be4114e7d0131f457d60e83d77a108dp@chr15:71685918..71685922, -
3.1e-50FFCP PHASE1:Hg19::chr11:20362300..20362305,+#_5be4114e7d0131f457d60e83d77a108dp@chr11:20362300..20362305, +
3.1e-50FFCP PHASE2:Hg19::chr8:116215335..116215378,+#_5be4114e7d0131f457d60e83d77a108dp@chr8:116215335..116215378, +
3.1e-50FFCP PHASE1:Hg19::chr1:219599419..219599426,-#_5be4114e7d0131f457d60e83d77a108dp@chr1:219599419..219599426, -
3.1e-50FFCP PHASE2:Hg19::chr7:26482694..26482710,-#_5be4114e7d0131f457d60e83d77a108dp@chr7:26482694..26482710, -
3.1e-50FFCP PHASE1:Hg19::chr7:120383546..120383560,+#_5be4114e7d0131f457d60e83d77a108dp@chr7:120383546..120383560, +
3.1e-50FFCP PHASE1:Hg19::chr3:95401928..95401936,-#_5be4114e7d0131f457d60e83d77a108dp3@ENST00000494840, p3@uc003dro.1
3.1e-50FFCP PHASE1:Hg19::chr2:135170047..135170048,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:135170047..135170048, +
3.1e-50FFCP PHASE2:Hg19::chr6:998897..998898,-#_5be4114e7d0131f457d60e83d77a108dp@chr6:998897..998898, -