FFCP PHASE1:Hg19::chr12:20097309..20097312,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:20097309..20097312,+ | |||
|coexpression_cluster_id=C145 | |coexpression_cluster_id=C145 | ||
|description=CAGE_peak_at_chr12:20097309..20097312,+ | |description=CAGE_peak_at_chr12:20097309..20097312,+ | ||
|id=chr12:20097309..20097312,+ | |id=chr12:20097309..20097312,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.40e-14;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!2.01e-17!10;DOID:3095!4.97e-08!22;DOID:2994!4.97e-08!22 | |ontology_enrichment_disease=DOID:171!2.01e-17!10;DOID:3095!4.97e-08!22;DOID:2994!4.97e-08!22 | ||
|ontology_enrichment_disease_v019=DOID:171;1.10e-59;10!DOID:3095;7.08e-28;22!DOID:2994;7.08e-28;22!DOID:169;2.19e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.10e-59,10;DOID:3095,7.08e-28,22;DOID:2994,7.08e-28,22;DOID:169,2.19e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0002771!1.62e-31!3;UBERON:0002619!2.30e-21!22;UBERON:0001871!4.15e-21!7;UBERON:0000956!7.82e-19!25;UBERON:0000203!7.82e-19!25;UBERON:0001950!2.49e-17!20;UBERON:0000200!4.16e-16!6;UBERON:0002346!1.01e-14!90;UBERON:0001869!1.04e-14!32;UBERON:0002791!2.92e-14!33;UBERON:0002020!7.78e-14!34;UBERON:0003528!7.78e-14!34;UBERON:0001893!7.78e-14!34;UBERON:0003112!9.61e-12!1;UBERON:0000032!9.61e-12!1;UBERON:0005253!9.61e-12!1;UBERON:0003128!9.61e-12!1;UBERON:0002241!9.61e-12!1;UBERON:0001703!9.61e-12!1;UBERON:0004761!9.61e-12!1;UBERON:0009617!9.61e-12!1;UBERON:0002780!2.01e-11!41;UBERON:0001890!2.01e-11!41;UBERON:0006240!2.01e-11!41;UBERON:0003080!3.83e-11!42;UBERON:0001049!1.58e-10!57;UBERON:0005068!1.58e-10!57;UBERON:0006241!1.58e-10!57;UBERON:0007135!1.58e-10!57;UBERON:0002616!3.80e-10!59;UBERON:0003056!9.45e-10!61;UBERON:0000073!2.41e-09!94;UBERON:0001016!2.41e-09!94;UBERON:0003075!1.77e-08!86;UBERON:0007284!1.77e-08!86;UBERON:0000955!1.97e-08!69;UBERON:0006238!1.97e-08!69;UBERON:0005743!2.28e-08!86;UBERON:0000924!4.26e-08!173;UBERON:0006601!4.26e-08!173;UBERON:0001017!5.56e-07!82;UBERON:0000033!6.73e-07!123 | |ontology_enrichment_uberon=UBERON:0002771!1.62e-31!3;UBERON:0002619!2.30e-21!22;UBERON:0001871!4.15e-21!7;UBERON:0000956!7.82e-19!25;UBERON:0000203!7.82e-19!25;UBERON:0001950!2.49e-17!20;UBERON:0000200!4.16e-16!6;UBERON:0002346!1.01e-14!90;UBERON:0001869!1.04e-14!32;UBERON:0002791!2.92e-14!33;UBERON:0002020!7.78e-14!34;UBERON:0003528!7.78e-14!34;UBERON:0001893!7.78e-14!34;UBERON:0003112!9.61e-12!1;UBERON:0000032!9.61e-12!1;UBERON:0005253!9.61e-12!1;UBERON:0003128!9.61e-12!1;UBERON:0002241!9.61e-12!1;UBERON:0001703!9.61e-12!1;UBERON:0004761!9.61e-12!1;UBERON:0009617!9.61e-12!1;UBERON:0002780!2.01e-11!41;UBERON:0001890!2.01e-11!41;UBERON:0006240!2.01e-11!41;UBERON:0003080!3.83e-11!42;UBERON:0001049!1.58e-10!57;UBERON:0005068!1.58e-10!57;UBERON:0006241!1.58e-10!57;UBERON:0007135!1.58e-10!57;UBERON:0002616!3.80e-10!59;UBERON:0003056!9.45e-10!61;UBERON:0000073!2.41e-09!94;UBERON:0001016!2.41e-09!94;UBERON:0003075!1.77e-08!86;UBERON:0007284!1.77e-08!86;UBERON:0000955!1.97e-08!69;UBERON:0006238!1.97e-08!69;UBERON:0005743!2.28e-08!86;UBERON:0000924!4.26e-08!173;UBERON:0006601!4.26e-08!173;UBERON:0001017!5.56e-07!82;UBERON:0000033!6.73e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;4.67e-66;4!UBERON:0000923;4.67e-66;4!UBERON:0010316;4.67e-66;4!UBERON:0005291;4.67e-66;4!UBERON:0002050;3.74e-53;5!UBERON:0005423;3.74e-53;5!UBERON:0000013;1.40e-14;5!UBERON:0002410;1.40e-14;5!UBERON:0000010;1.04e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.40e-14,5;UBERON:0002410,1.40e-14,5;UBERON:0000010,1.04e-08,8 | |||
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|short_description=p@chr12:20097309..20097312,+ | |short_description=p@chr12:20097309..20097312,+ | ||
}} | }} |
Latest revision as of 07:25, 24 July 2015
Short description: | p@chr12:20097309..20097312, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:20097309..20097312, + |
Coexpression cluster: | C145_neuroblastoma_peripheral_neuroectodermal_neuroepithelioma_carcinoid_adult_extraskeletal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.40e-14 | 5 |
autonomic nervous system | 1.40e-14 | 5 |
peripheral nervous system | 1.04e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.10e-59 | 10 |
germ cell and embryonal cancer | 7.08e-28 | 22 |
germ cell cancer | 7.08e-28 | 22 |
neuroendocrine tumor | 2.19e-12 | 6 |