FFCP PHASE1:Hg19::chr19:18899082..18899091,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:18899082..18899091,+ | |||
|coexpression_cluster_id=C240 | |coexpression_cluster_id=C240 | ||
|description=CAGE_peak_at_chr19:18899082..18899091,+ | |description=CAGE_peak_at_chr19:18899082..18899091,+ | ||
|id=chr19:18899082..18899091,+ | |id=chr19:18899082..18899091,+ | ||
|ontology_enrichment_celltype=CL:0002580!1.23e-25!3;CL:0002334!3.95e-24!12;CL:0002617!1.37e-17!2;CL:0000153!1.54e-14!9;CL:0000447!1.54e-14!9;CL:0000136!1.51e-13!15;CL:0000057!2.85e-13!75;CL:0000667!1.31e-12!6;CL:0000058!1.31e-12!6;CL:0000138!1.31e-12!6;CL:0002615!5.13e-12!3;CL:0002579!1.43e-11!3;CL:0002581!1.12e-09!1;CL:0000327!2.08e-09!14;CL:0000055!2.55e-08!180;CL:0002620!2.62e-08!23;CL:0000499!2.45e-07!27;CL:0000134!4.13e-07!358;CL:0002320!6.71e-07!365 | |ontology_enrichment_celltype=CL:0002580!1.23e-25!3;CL:0002334!3.95e-24!12;CL:0002617!1.37e-17!2;CL:0000153!1.54e-14!9;CL:0000447!1.54e-14!9;CL:0000136!1.51e-13!15;CL:0000057!2.85e-13!75;CL:0000667!1.31e-12!6;CL:0000058!1.31e-12!6;CL:0000138!1.31e-12!6;CL:0002615!5.13e-12!3;CL:0002579!1.43e-11!3;CL:0002581!1.12e-09!1;CL:0000327!2.08e-09!14;CL:0000055!2.55e-08!180;CL:0002620!2.62e-08!23;CL:0000499!2.45e-07!27;CL:0000134!4.13e-07!358;CL:0002320!6.71e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0002580;1.10e-59;3!CL:0002617;1.49e-40;2!CL:0002334;1.04e-26;12!CL:0002581;5.16e-21;1!CL:0000136;1.61e-14;13!CL:0002615;4.52e-08;3!CL:0000135;6.78e-08;3!CL:0000214;6.78e-08;3!CL:0000388;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,4.46e-60,3;CL:0002617,2.01e-40,2;CL:0002334,6.78e-27,12;CL:0002581,3.45e-21,1;CL:0000136,1.20e-12,15;CL:0002615,4.52e-08,3;CL:0000135,6.78e-08,3;CL:0000388,6.78e-08,3;CL:0000214,7.76e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!7.57e-22!6;UBERON:0002358!7.57e-22!6;UBERON:0003684!7.57e-22!6;UBERON:0001178!7.57e-22!6;UBERON:0000310!1.12e-20!10;UBERON:0001443!8.66e-19!11;UBERON:0004457!8.56e-17!12;UBERON:0000042!8.56e-17!12 | |ontology_enrichment_uberon=UBERON:0003688!7.57e-22!6;UBERON:0002358!7.57e-22!6;UBERON:0003684!7.57e-22!6;UBERON:0001178!7.57e-22!6;UBERON:0000310!1.12e-20!10;UBERON:0001443!8.66e-19!11;UBERON:0004457!8.56e-17!12;UBERON:0000042!8.56e-17!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0000310;1.87e-49;10!UBERON:0001443;5.36e-45;11!UBERON:0005406;3.34e-11;2!UBERON:0004457;7.40e-10;9!UBERON:0000042;7.40e-10;9!UBERON:0007846;6.78e-08;3!UBERON:0006915;6.78e-08;3!UBERON:0007616;6.78e-08;3!UBERON:0000043;6.78e-08;3!UBERON:0007845;6.78e-08;3!UBERON:0002217;6.78e-08;3!UBERON:0002018;6.78e-08;3!UBERON:0000915;2.02e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,1.39e-49,10;UBERON:0001443,4.08e-45,11;UBERON:0005406,2.73e-11,2;UBERON:0000915,1.04e-09,52;UBERON:0007846,6.78e-08,3;UBERON:0000043,6.78e-08,3;UBERON:0007845,6.78e-08,3;UBERON:0006915,7.76e-08,3;UBERON:0007616,7.76e-08,3;UBERON:0002217,7.76e-08,3;UBERON:0002018,7.76e-08,3;UBERON:0004457,1.37e-07,12;UBERON:0000042,1.37e-07,12 | |||
|phase1_expression=3.08853244759946,1.2846031433459,0.986680828671798,8.00586386825043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.724232594804119,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0.257640540045629,0.18611685633159,0.168776332241266,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0.30239029332968,1.73675465473144,3.52962538562544,1.40330047216537,0.640695746278505,0,0.321707842287215,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26664581178598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=3.08853244759946,1.2846031433459,0.986680828671798,8.00586386825043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.724232594804119,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0.257640540045629,0.18611685633159,0.168776332241266,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0.30239029332968,1.73675465473144,3.52962538562544,1.40330047216537,0.640695746278505,0,0.321707842287215,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26664581178598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:18899082..18899091,+ | |short_description=p@chr19:18899082..18899091,+ | ||
}} | }} |
Latest revision as of 05:21, 26 July 2015
Short description: | p@chr19:18899082..18899091, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:18899082..18899091, + |
Coexpression cluster: | C240_Adipocyte_Preadipocyte_Osteoblast_Chondrocyte_tenocyte_Synoviocyte_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 4.46e-60 | 3 |
adipocyte of breast | 2.01e-40 | 2 |
preadipocyte | 6.78e-27 | 12 |
perirenal preadipocyte | 3.45e-21 | 1 |
fat cell | 1.20e-12 | 15 |
adipocyte of omentum tissue | 4.52e-08 | 3 |
fibrocyte | 6.78e-08 | 3 |
tendon cell | 6.78e-08 | 3 |
synovial cell | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
breast | 1.39e-49 | 10 |
chest | 4.08e-45 | 11 |
perirenal fat | 2.73e-11 | 2 |
thoracic segment of trunk | 1.04e-09 | 52 |
dense regular connective tissue | 6.78e-08 | 3 |
tendon | 6.78e-08 | 3 |
regular connective tissue | 6.78e-08 | 3 |
stratified squamous epithelium | 7.76e-08 | 3 |
layer of synovial tissue | 7.76e-08 | 3 |
synovial joint | 7.76e-08 | 3 |
synovial membrane of synovial joint | 7.76e-08 | 3 |
cavity lining | 1.37e-07 | 12 |
serous membrane | 1.37e-07 | 12 |