FFCP PHASE1:Hg19::chr10:17270548..17270610,+
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p2@VIM |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_VIM_5end |
| Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
| Association with transcript: | 34bp_to_ENST00000478746_5end |
| EntrezGene: | VIM |
| HGNC: | 12692 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@VIM |
|---|
0
50
100
150
200
250
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| classical monocyte | 1.05e-26 | 42 |
| CD14-positive, CD16-negative classical monocyte | 1.05e-26 | 42 |
| myeloid leukocyte | 1.50e-26 | 72 |
| granulocyte monocyte progenitor cell | 1.39e-23 | 67 |
| defensive cell | 1.79e-23 | 48 |
| phagocyte | 1.79e-23 | 48 |
| macrophage dendritic cell progenitor | 1.04e-20 | 61 |
| myeloid lineage restricted progenitor cell | 5.76e-20 | 66 |
| monopoietic cell | 1.42e-19 | 59 |
| monocyte | 1.42e-19 | 59 |
Showing 1 to 10 of 28 entries
| Ontology term | p-value | n |
|---|---|---|
| lateral plate mesoderm | 2.62e-30 | 203 |
| hemolymphoid system | 1.97e-23 | 108 |
| hematopoietic system | 8.55e-23 | 98 |
| blood island | 8.55e-23 | 98 |
| bone marrow | 2.89e-21 | 76 |
| immune system | 3.56e-20 | 93 |
| bone element | 4.58e-20 | 82 |
| skeletal element | 1.94e-18 | 90 |
| skeletal system | 3.49e-17 | 100 |
| mesoderm | 1.07e-16 | 315 |
Showing 1 to 10 of 24 entries
