FFCP PHASE2:Hg19::chr12:54402745..54402788,+
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p1@HOXC8 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_HOXC8_5end |
| Coexpression cluster: | C1362_Preadipocyte_Adipocyte_Fibroblast_Mesenchymal_mesenchymal_Myoblast_Smooth |
| Association with transcript: | -43bp_to_ENST00000040584_5end |
| EntrezGene: | HOXC8 |
| HGNC: | 5129 |
| UniProt: | P31273 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@HOXC8 |
|---|
0
10
20
30
40
50
60
70
80
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| fat cell | 3.08e-15 | 15 |
| fibroblast | 1.47e-14 | 76 |
| skin fibroblast | 4.15e-14 | 23 |
| preadipocyte | 2.03e-13 | 12 |
| mesenchymal stem cell of adipose | 3.14e-09 | 8 |
| cell of skeletal muscle | 1.62e-07 | 9 |
Showing 1 to 6 of 6 entries
| Ontology term | p-value | n |
|---|---|---|
| integument | 1.49e-16 | 46 |
| integumental system | 1.49e-16 | 46 |
| adipose tissue | 3.06e-14 | 14 |
| skin of body | 8.24e-13 | 41 |
| omentum | 6.72e-08 | 6 |
| peritoneum | 6.72e-08 | 6 |
| abdominal cavity | 6.72e-08 | 6 |
| visceral peritoneum | 6.72e-08 | 6 |
| articulation | 9.76e-08 | 8 |
| skeletal joint | 9.76e-08 | 8 |
Showing 1 to 10 of 12 entries
