FFCP PHASE2:Hg19::chr18:21269527..21269555,+
From FANTOM5_SSTAR
Jump to: navigation, search
Short description: | p4@LAMA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LAMA3_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENST00000313654, ENST00000399516, ENST00000416669, ENST00000538801, NM_001127717, NM_198129, uc002kuq.2, uc002kur.2, uc010dlv.1_5end |
EntrezGene: | LAMA3 |
HGNC: | 6483 |
UniProt: | Q16787Q6VU67F5GWM0F5H8G3Q566Q1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@LAMA3 |
---|
0
5
10
15
20
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.89e-13 | 253 |
endo-epithelial cell | 1.43e-10 | 42 |
endodermal cell | 1.56e-07 | 58 |
Showing 1 to 3 of 3 entries
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 7.59e-12 | 160 |
endoderm | 7.59e-12 | 160 |
presumptive endoderm | 7.59e-12 | 160 |
digestive system | 9.56e-12 | 145 |
digestive tract | 9.56e-12 | 145 |
primitive gut | 9.56e-12 | 145 |
reproductive structure | 5.26e-11 | 59 |
reproductive system | 5.26e-11 | 59 |
hindgut | 1.38e-10 | 19 |
intermediate mesoderm | 1.46e-10 | 28 |
Showing 1 to 10 of 35 entries
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.61e-11 | 106 |
cell type cancer | 3.80e-07 | 143 |
squamous cell carcinoma | 5.18e-07 | 14 |
Showing 1 to 3 of 3 entries