FFCP PHASE1:Mm9::chrX:76880914..76880926,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chrX:76880914..76880926,- | |id=chrX:76880914..76880926,- | ||
|ontology_enrichment_celltype=CL:0000349!1.77e-12!3;CL:0000351!1.77e-12!3 | |ontology_enrichment_celltype=CL:0000349!1.77e-12!3;CL:0000351!1.77e-12!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.57e-20,3;CL:0000351,2.57e-20,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003133!2.02e-40!24;UBERON:0005156!4.50e-37!26;UBERON:0000990!4.50e-37!26;UBERON:0000991!1.33e-36!18;UBERON:0005564!1.33e-36!18;UBERON:0004176!1.38e-33!17;UBERON:0009196!1.38e-33!17;UBERON:0009117!1.38e-33!17;UBERON:0000473!1.34e-29!14;UBERON:0003135!1.69e-27!15;UBERON:0003101!1.16e-25!16;UBERON:0000079!1.16e-25!16;UBERON:0002323!1.81e-16!37;UBERON:0004458!1.81e-16!37;UBERON:0003886!5.76e-16!38;UBERON:0002553!1.73e-15!39;UBERON:0005631!1.77e-12!3;UBERON:0000478!1.77e-12!3;UBERON:0000158!1.77e-12!3;UBERON:0000358!1.77e-12!3;UBERON:0000307!1.77e-12!3;UBERON:0003134!3.74e-11!8;UBERON:0000474!6.89e-10!9;UBERON:0000464!9.18e-10!57;UBERON:0005795!6.79e-09!4;UBERON:0000995!6.79e-09!4;UBERON:0001987!9.05e-09!2;UBERON:0003124!9.05e-09!2;UBERON:0004340!9.05e-09!2;UBERON:0003100!4.80e-08!11;UBERON:0003975!3.38e-07!5 | |ontology_enrichment_uberon=UBERON:0003133!2.02e-40!24;UBERON:0005156!4.50e-37!26;UBERON:0000990!4.50e-37!26;UBERON:0000991!1.33e-36!18;UBERON:0005564!1.33e-36!18;UBERON:0004176!1.38e-33!17;UBERON:0009196!1.38e-33!17;UBERON:0009117!1.38e-33!17;UBERON:0000473!1.34e-29!14;UBERON:0003135!1.69e-27!15;UBERON:0003101!1.16e-25!16;UBERON:0000079!1.16e-25!16;UBERON:0002323!1.81e-16!37;UBERON:0004458!1.81e-16!37;UBERON:0003886!5.76e-16!38;UBERON:0002553!1.73e-15!39;UBERON:0005631!1.77e-12!3;UBERON:0000478!1.77e-12!3;UBERON:0000158!1.77e-12!3;UBERON:0000358!1.77e-12!3;UBERON:0000307!1.77e-12!3;UBERON:0003134!3.74e-11!8;UBERON:0000474!6.89e-10!9;UBERON:0000464!9.18e-10!57;UBERON:0005795!6.79e-09!4;UBERON:0000995!6.79e-09!4;UBERON:0001987!9.05e-09!2;UBERON:0003124!9.05e-09!2;UBERON:0004340!9.05e-09!2;UBERON:0003100!4.80e-08!11;UBERON:0003975!3.38e-07!5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.60e-27,14;UBERON:0003135,1.88e-25,15;UBERON:0003133,8.66e-25,24;UBERON:0003101,7.99e-24,16;UBERON:0000079,7.99e-24,16;UBERON:0005156,8.26e-23,26;UBERON:0000990,8.26e-23,26;UBERON:0004176,2.19e-22,17;UBERON:0009196,2.19e-22,17;UBERON:0009117,2.19e-22,17;UBERON:0000991,4.14e-21,18;UBERON:0005564,4.14e-21,18;UBERON:0005631,2.57e-20,3;UBERON:0000478,2.57e-20,3;UBERON:0000158,2.57e-20,3;UBERON:0000358,2.57e-20,3;UBERON:0000307,2.57e-20,3;UBERON:0007010,2.57e-20,3;UBERON:0001987,6.08e-14,2;UBERON:0003124,6.08e-14,2;UBERON:0004340,6.08e-14,2;UBERON:0002323,6.56e-10,37;UBERON:0004458,6.56e-10,37;UBERON:0003886,1.25e-09,38;UBERON:0002553,2.31e-09,39;UBERON:0000305,4.65e-08,1;UBERON:0005795,2.06e-07,4;UBERON:0000995,2.06e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,5.43828929015623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.488660878060728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3467170806371,4.66030555900404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,1.34564891439581,1.65458490457098,1.16670713006429,1.16243841129958,1.01373675294467,0.469428954583016,1.5624526181274,4.40409246587986,1.20792060413003,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43971906748129,5.11368982674011,4.53288464183012,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,5.43828929015623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.488660878060728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3467170806371,4.66030555900404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,1.34564891439581,1.65458490457098,1.16670713006429,1.16243841129958,1.01373675294467,0.469428954583016,1.5624526181274,4.40409246587986,1.20792060413003,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43971906748129,5.11368982674011,4.53288464183012,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@Mageb16 | |short_description=p1@Mageb16 | ||
}} | }} |
Revision as of 04:34, 14 November 2012
Short description: | p1@Mageb16 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mageb16_5end |
Coexpression cluster: | MCL_coexpression_mm9:1697 |
Association with transcript: | 0bp_to_ENSMUST00000114016, NM_001113734, uc009trb.2_5end |
EntrezGene: | Mageb16 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.57e-20 | 3 |
trophoblast cell | 2.57e-20 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 2.60e-27 | 14 |
male reproductive organ | 1.88e-25 | 15 |
reproductive organ | 8.66e-25 | 24 |
male organism | 7.99e-24 | 16 |
male reproductive system | 7.99e-24 | 16 |
reproductive structure | 8.26e-23 | 26 |
reproductive system | 8.26e-23 | 26 |
external genitalia | 2.19e-22 | 17 |
indifferent external genitalia | 2.19e-22 | 17 |
indifferent gonad | 2.19e-22 | 17 |
gonad | 4.14e-21 | 18 |
gonad primordium | 4.14e-21 | 18 |
extraembryonic membrane | 2.57e-20 | 3 |
extraembryonic structure | 2.57e-20 | 3 |
membranous layer | 2.57e-20 | 3 |
blastocyst | 2.57e-20 | 3 |
blastula | 2.57e-20 | 3 |
cleaving embryo | 2.57e-20 | 3 |
placenta | 6.08e-14 | 2 |
chorion | 6.08e-14 | 2 |
allantois | 6.08e-14 | 2 |
body cavity | 6.56e-10 | 37 |
body cavity or lining | 6.56e-10 | 37 |
body cavity precursor | 1.25e-09 | 38 |
anatomical cavity | 2.31e-09 | 39 |
amnion | 4.65e-08 | 1 |
embryonic uterus | 2.06e-07 | 4 |
uterus | 2.06e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.