FFCP PHASE1:Mm9::chr2:34817222..34817237,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr2:34817222..34817237,+ | |id=chr2:34817222..34817237,+ | ||
|ontology_enrichment_celltype=CL:0000988!7.59e-16!32;CL:0002032!7.59e-16!32;CL:0000037!7.59e-16!32;CL:0000566!7.59e-16!32;CL:0000837!7.59e-16!32;CL:0000791!6.10e-11!9;CL:0000789!6.10e-11!9;CL:0002420!6.10e-11!9;CL:0002419!6.10e-11!9;CL:0000790!6.10e-11!9;CL:0002320!1.84e-10!46;CL:0000134!1.84e-10!46;CL:0000893!7.23e-10!6;CL:0002489!7.23e-10!6;CL:0000898!7.23e-10!6;CL:0000809!7.23e-10!6;CL:0000810!7.23e-10!6;CL:0000895!7.23e-10!6;CL:0000808!7.23e-10!6;CL:0000894!7.23e-10!6;CL:0000806!7.23e-10!6;CL:0000807!7.23e-10!6;CL:0000805!7.23e-10!6;CL:0002425!7.23e-10!6;CL:0002436!7.23e-10!6;CL:0002427!7.23e-10!6;CL:0002428!7.23e-10!6;CL:0002429!7.23e-10!6;CL:0002433!7.23e-10!6;CL:0002431!7.23e-10!6;CL:0002432!7.23e-10!6;CL:0000838!8.05e-10!12;CL:0000624!9.49e-10!8;CL:0000738!9.59e-10!17;CL:0002087!9.59e-10!17;CL:0002031!1.16e-09!25;CL:0000542!6.75e-09!13;CL:0000051!6.75e-09!13;CL:0000084!1.29e-08!11;CL:0000827!1.29e-08!11;CL:0000049!2.83e-08!19;CL:0000219!4.75e-08!54 | |ontology_enrichment_celltype=CL:0000988!7.59e-16!32;CL:0002032!7.59e-16!32;CL:0000037!7.59e-16!32;CL:0000566!7.59e-16!32;CL:0000837!7.59e-16!32;CL:0000791!6.10e-11!9;CL:0000789!6.10e-11!9;CL:0002420!6.10e-11!9;CL:0002419!6.10e-11!9;CL:0000790!6.10e-11!9;CL:0002320!1.84e-10!46;CL:0000134!1.84e-10!46;CL:0000893!7.23e-10!6;CL:0002489!7.23e-10!6;CL:0000898!7.23e-10!6;CL:0000809!7.23e-10!6;CL:0000810!7.23e-10!6;CL:0000895!7.23e-10!6;CL:0000808!7.23e-10!6;CL:0000894!7.23e-10!6;CL:0000806!7.23e-10!6;CL:0000807!7.23e-10!6;CL:0000805!7.23e-10!6;CL:0002425!7.23e-10!6;CL:0002436!7.23e-10!6;CL:0002427!7.23e-10!6;CL:0002428!7.23e-10!6;CL:0002429!7.23e-10!6;CL:0002433!7.23e-10!6;CL:0002431!7.23e-10!6;CL:0002432!7.23e-10!6;CL:0000838!8.05e-10!12;CL:0000624!9.49e-10!8;CL:0000738!9.59e-10!17;CL:0002087!9.59e-10!17;CL:0002031!1.16e-09!25;CL:0000542!6.75e-09!13;CL:0000051!6.75e-09!13;CL:0000084!1.29e-08!11;CL:0000827!1.29e-08!11;CL:0000049!2.83e-08!19;CL:0000219!4.75e-08!54 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.02e-10,32;CL:0002032,1.02e-10,32;CL:0000037,1.02e-10,32;CL:0000837,1.02e-10,32;CL:0000624,7.16e-09,8;CL:0000815,2.06e-08,1;CL:0000792,2.06e-08,1;CL:0000791,6.04e-08,9;CL:0000789,6.04e-08,9;CL:0002420,6.04e-08,9;CL:0002419,6.04e-08,9;CL:0000790,6.04e-08,9;CL:0002320,2.60e-07,46;CL:0000134,2.60e-07,46;CL:0000738,3.67e-07,17;CL:0002087,3.67e-07,17;CL:0000034,9.92e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.47e-16!48;UBERON:0002390!1.11e-15!45;UBERON:0003061!1.11e-15!45;UBERON:0004177!1.14e-11!29;UBERON:0002405!1.72e-10!70;UBERON:0002384!1.84e-10!46;UBERON:0003081!8.96e-10!88;UBERON:0002370!5.63e-08!23;UBERON:0000974!5.63e-08!23;UBERON:0004807!5.63e-08!23;UBERON:0005058!5.63e-08!23;UBERON:0003351!5.63e-08!23;UBERON:0009113!5.63e-08!23;UBERON:0003295!5.63e-08!23;UBERON:0009722!5.63e-08!23;UBERON:0005562!5.63e-08!23;UBERON:0007690!5.63e-08!23;UBERON:0006562!1.63e-07!24;UBERON:0003408!1.63e-07!24;UBERON:0001557!1.63e-07!24;UBERON:0001042!1.63e-07!24;UBERON:0008814!1.63e-07!24;UBERON:0009145!1.63e-07!24;UBERON:0000072!1.91e-07!27;UBERON:0000926!2.97e-07!193;UBERON:0004120!2.97e-07!193;UBERON:0006603!2.97e-07!193;UBERON:0000065!7.56e-07!41 | |ontology_enrichment_uberon=UBERON:0002193!7.47e-16!48;UBERON:0002390!1.11e-15!45;UBERON:0003061!1.11e-15!45;UBERON:0004177!1.14e-11!29;UBERON:0002405!1.72e-10!70;UBERON:0002384!1.84e-10!46;UBERON:0003081!8.96e-10!88;UBERON:0002370!5.63e-08!23;UBERON:0000974!5.63e-08!23;UBERON:0004807!5.63e-08!23;UBERON:0005058!5.63e-08!23;UBERON:0003351!5.63e-08!23;UBERON:0009113!5.63e-08!23;UBERON:0003295!5.63e-08!23;UBERON:0009722!5.63e-08!23;UBERON:0005562!5.63e-08!23;UBERON:0007690!5.63e-08!23;UBERON:0006562!1.63e-07!24;UBERON:0003408!1.63e-07!24;UBERON:0001557!1.63e-07!24;UBERON:0001042!1.63e-07!24;UBERON:0008814!1.63e-07!24;UBERON:0009145!1.63e-07!24;UBERON:0000072!1.91e-07!27;UBERON:0000926!2.97e-07!193;UBERON:0004120!2.97e-07!193;UBERON:0006603!2.97e-07!193;UBERON:0000065!7.56e-07!41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,8.81e-09,1;UBERON:0001097,8.81e-09,1;UBERON:0003968,8.81e-09,1;UBERON:0001467,8.81e-09,1;UBERON:0002384,2.60e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,1.29123323441576,3.801295498095,2.10658073689794,0.68487187290202,0.398860794976682,0.684802919724823,0.34968160967599,0,0,0,0.315462165358238,0.274228867211478,0.84877930359606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0.503347818173209,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,2.84831672011889,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0.969750506270444,0,0,0,0,1.7972268675888,2.39961092397363,1.27070227073065,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,1.1270773567308,0.203651327845314,0.193952487167626,0,0,0,0,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0.327726629431476,0,0.144649058581512,1.50791283939272,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0,0.170870880797853,0.206386867963223,0.185194527369712,0,0.136694227721025,0.686334519619568,8.32894306969891,3.91864066506242,3.04039942369732,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.201932899896295,0.15241361331,0.100826185136841,0.292373642219257,0.481059208201647,0.233753804363138,0,0,0,0,0,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,1.29123323441576,3.801295498095,2.10658073689794,0.68487187290202,0.398860794976682,0.684802919724823,0.34968160967599,0,0,0,0.315462165358238,0.274228867211478,0.84877930359606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0.503347818173209,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,2.84831672011889,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0.969750506270444,0,0,0,0,1.7972268675888,2.39961092397363,1.27070227073065,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,1.1270773567308,0.203651327845314,0.193952487167626,0,0,0,0,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0.327726629431476,0,0.144649058581512,1.50791283939272,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0,0.170870880797853,0.206386867963223,0.185194527369712,0,0.136694227721025,0.686334519619568,8.32894306969891,3.91864066506242,3.04039942369732,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.201932899896295,0.15241361331,0.100826185136841,0.292373642219257,0.481059208201647,0.233753804363138,0,0,0,0,0,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p@chr2:34817222..34817237,+ | |short_description=p@chr2:34817222..34817237,+ | ||
}} | }} |
Revision as of 08:17, 14 November 2012
Short description: | p@chr2:34817222..34817237, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:34817222..34817237, + |
Coexpression cluster: | MCL_coexpression_mm9:269 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.02e-10 | 32 |
hematopoietic oligopotent progenitor cell | 1.02e-10 | 32 |
hematopoietic stem cell | 1.02e-10 | 32 |
hematopoietic multipotent progenitor cell | 1.02e-10 | 32 |
CD4-positive, alpha-beta T cell | 7.16e-09 | 8 |
regulatory T cell | 2.06e-08 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.06e-08 | 1 |
mature alpha-beta T cell | 6.04e-08 | 9 |
alpha-beta T cell | 6.04e-08 | 9 |
immature T cell | 6.04e-08 | 9 |
mature T cell | 6.04e-08 | 9 |
immature alpha-beta T cell | 6.04e-08 | 9 |
connective tissue cell | 2.60e-07 | 46 |
mesenchymal cell | 2.60e-07 | 46 |
leukocyte | 3.67e-07 | 17 |
nongranular leukocyte | 3.67e-07 | 17 |
stem cell | 9.92e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
lymph node | 8.81e-09 | 1 |
axillary lymph node | 8.81e-09 | 1 |
peripheral lymph node | 8.81e-09 | 1 |
shoulder | 8.81e-09 | 1 |
connective tissue | 2.60e-07 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.