FFCP PHASE1:Mm9::chr9:24529233..24529237,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr9:24529233..24529237,- | |id=chr9:24529233..24529237,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002494,1.10e-07,3;CL:0000737,1.10e-07,3;CL:0000746,1.10e-07,3;CL:0000513,1.10e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!2.21e-29!18;UBERON:0000948!2.21e-29!18;UBERON:0005498!2.21e-29!18;UBERON:0004140!2.21e-29!18;UBERON:0009881!2.21e-29!18;UBERON:0004141!2.21e-29!18;UBERON:0003084!2.21e-29!18;UBERON:0007005!2.21e-29!18;UBERON:0004139!2.21e-29!18;UBERON:0004291!2.21e-29!18;UBERON:0004535!1.01e-21!23;UBERON:0001009!1.01e-21!23;UBERON:0003914!8.60e-20!47;UBERON:0004872!5.37e-15!33;UBERON:0003103!3.53e-10!43;UBERON:0000025!1.90e-08!114;UBERON:0004111!2.62e-07!122 | |ontology_enrichment_uberon=UBERON:0007100!2.21e-29!18;UBERON:0000948!2.21e-29!18;UBERON:0005498!2.21e-29!18;UBERON:0004140!2.21e-29!18;UBERON:0009881!2.21e-29!18;UBERON:0004141!2.21e-29!18;UBERON:0003084!2.21e-29!18;UBERON:0007005!2.21e-29!18;UBERON:0004139!2.21e-29!18;UBERON:0004291!2.21e-29!18;UBERON:0004535!1.01e-21!23;UBERON:0001009!1.01e-21!23;UBERON:0003914!8.60e-20!47;UBERON:0004872!5.37e-15!33;UBERON:0003103!3.53e-10!43;UBERON:0000025!1.90e-08!114;UBERON:0004111!2.62e-07!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.82e-72,18;UBERON:0000948,1.82e-72,18;UBERON:0005498,1.82e-72,18;UBERON:0004140,1.82e-72,18;UBERON:0009881,1.82e-72,18;UBERON:0004141,1.82e-72,18;UBERON:0003084,1.82e-72,18;UBERON:0007005,1.82e-72,18;UBERON:0004139,1.82e-72,18;UBERON:0004291,1.82e-72,18;UBERON:0004535,2.43e-56,23;UBERON:0001009,2.43e-56,23;UBERON:0004872,1.00e-38,33;UBERON:0003914,3.58e-30,47;UBERON:0003103,2.75e-29,43;UBERON:0003081,1.86e-13,87;UBERON:0010314,1.31e-12,92;UBERON:0000025,3.15e-11,114;UBERON:0004111,2.39e-10,122;UBERON:0001048,3.21e-09,134;UBERON:0000926,3.70e-09,120;UBERON:0004120,3.70e-09,120;UBERON:0006603,3.70e-09,120 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.3734104126111,1.14613375975503,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904335843315735,0.470354828542819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,1.44988040774851,4.45599513964083,8.64297895012871,1.89395788468168,7.28027657465394,5.39934895105824,7.20855228726264,4.82892122519315,2.10177616260905,4.60767579757745,3.447516745661,2.51313309592153,1.31579988682799,2.41505126820156,0.268412837520744,0,0,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0.166845105716094,0,0.224862112384854,0,0,0.25462585178142,0,0.162135226775035,0,1.43768206527355,0,0,0.252578877947112,0.179397413521912,0.482443521363367,0,0.189491411770485,0.162964976442026,0.339490171550376,0,0.167506257441816,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.0897138566094757,0.335769232728157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.486213434136588,0,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0,0.0640251524048693,0,0,0.115884325944855,0,0.412085900803307,0,0.342869252385415,0,0,0,0,0.169229215783353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.3734104126111,1.14613375975503,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904335843315735,0.470354828542819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,1.44988040774851,4.45599513964083,8.64297895012871,1.89395788468168,7.28027657465394,5.39934895105824,7.20855228726264,4.82892122519315,2.10177616260905,4.60767579757745,3.447516745661,2.51313309592153,1.31579988682799,2.41505126820156,0.268412837520744,0,0,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0.166845105716094,0,0.224862112384854,0,0,0.25462585178142,0,0.162135226775035,0,1.43768206527355,0,0,0.252578877947112,0.179397413521912,0.482443521363367,0,0.189491411770485,0.162964976442026,0.339490171550376,0,0.167506257441816,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.0897138566094757,0.335769232728157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.486213434136588,0,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0,0.0640251524048693,0,0,0.115884325944855,0,0.412085900803307,0,0.342869252385415,0,0,0,0,0.169229215783353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr9:24529233..24529237,- | |short_description=p@chr9:24529233..24529237,- | ||
}} | }} |
Revision as of 09:51, 14 November 2012
Short description: | p@chr9:24529233..24529237, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:24529233..24529237, - |
Coexpression cluster: | MCL_coexpression_mm9:45 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 1.10e-07 | 3 |
striated muscle cell | 1.10e-07 | 3 |
cardiac muscle cell | 1.10e-07 | 3 |
cardiac muscle myoblast | 1.10e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.82e-72 | 18 |
heart | 1.82e-72 | 18 |
primitive heart tube | 1.82e-72 | 18 |
primary heart field | 1.82e-72 | 18 |
anterior lateral plate mesoderm | 1.82e-72 | 18 |
heart tube | 1.82e-72 | 18 |
heart primordium | 1.82e-72 | 18 |
cardiac mesoderm | 1.82e-72 | 18 |
cardiogenic plate | 1.82e-72 | 18 |
heart rudiment | 1.82e-72 | 18 |
cardiovascular system | 2.43e-56 | 23 |
circulatory system | 2.43e-56 | 23 |
splanchnic layer of lateral plate mesoderm | 1.00e-38 | 33 |
epithelial tube | 3.58e-30 | 47 |
compound organ | 2.75e-29 | 43 |
lateral plate mesoderm | 1.86e-13 | 87 |
structure with developmental contribution from neural crest | 1.31e-12 | 92 |
tube | 3.15e-11 | 114 |
anatomical conduit | 2.39e-10 | 122 |
primordium | 3.21e-09 | 134 |
mesoderm | 3.70e-09 | 120 |
mesoderm-derived structure | 3.70e-09 | 120 |
presumptive mesoderm | 3.70e-09 | 120 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.