FFCP PHASE1:Mm9::chr19:28838027..28838030,-: Difference between revisions
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|id=chr19:28838027..28838030,- | |id=chr19:28838027..28838030,- | ||
|ontology_enrichment_celltype=CL:0000063!8.80e-09!66;CL:0000988!4.11e-08!32;CL:0002032!4.11e-08!32;CL:0000037!4.11e-08!32;CL:0000566!4.11e-08!32;CL:0000837!4.11e-08!32;CL:0002371!4.85e-08!118;CL:0000144!6.48e-08!121;CL:0000012!6.48e-08!121;CL:0000542!8.66e-08!13;CL:0000051!8.66e-08!13;CL:0000838!2.00e-07!12;CL:0000219!2.03e-07!54;CL:0000548!3.40e-07!115;CL:0000004!3.40e-07!115;CL:0000255!3.40e-07!115;CL:0002031!8.48e-07!25;CL:0000084!9.20e-07!11;CL:0000827!9.20e-07!11 | |ontology_enrichment_celltype=CL:0000063!8.80e-09!66;CL:0000988!4.11e-08!32;CL:0002032!4.11e-08!32;CL:0000037!4.11e-08!32;CL:0000566!4.11e-08!32;CL:0000837!4.11e-08!32;CL:0002371!4.85e-08!118;CL:0000144!6.48e-08!121;CL:0000012!6.48e-08!121;CL:0000542!8.66e-08!13;CL:0000051!8.66e-08!13;CL:0000838!2.00e-07!12;CL:0000219!2.03e-07!54;CL:0000548!3.40e-07!115;CL:0000004!3.40e-07!115;CL:0000255!3.40e-07!115;CL:0002031!8.48e-07!25;CL:0000084!9.20e-07!11;CL:0000827!9.20e-07!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000219,4.93e-13,54;CL:0000988,5.43e-13,32;CL:0002032,5.43e-13,32;CL:0000037,5.43e-13,32;CL:0000837,5.43e-13,32;CL:0002320,9.76e-12,46;CL:0000134,9.76e-12,46;CL:0002031,1.68e-10,25;CL:0000542,9.31e-10,13;CL:0000051,9.31e-10,13;CL:0000838,3.10e-09,12;CL:0000738,4.63e-09,17;CL:0002087,4.63e-09,17;CL:0000791,1.57e-08,9;CL:0000789,1.57e-08,9;CL:0002420,1.57e-08,9;CL:0002419,1.57e-08,9;CL:0000790,1.57e-08,9;CL:0000084,2.64e-08,11;CL:0000827,2.64e-08,11;CL:0000624,9.64e-08,8;CL:0000034,1.90e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.76e-12,46 | |||
|phase1_expression=2.08193501236232,1.04692622291808,0.454999239389536,1.20985684522732,1.00179145989269,2.01455126294268,9.81173090501208,5.93967287831251,7.32101355188667,12.4054198950657,4.96532107853964,3.03134204182278,8.56003649656029,6.7313709862628,0.333109761815663,9.71881283471165,9.09430441566591,7.72882305127682,6.30726394586398,5.94145512517242,0.0850432901510698,0.695036658406197,13.5823890352246,9.5995453676044,6.42345986988076,0.57423196411502,1.7230479846363,3.44753972297422,4.94060890586572,0.504060259519861,2.88249663851896,2.54012269383853,0,0,0.288851619751275,0.498703936075477,1.02084678131185,2.09265815368454,1.5626706890476,3.14114246384279,1.17646297606203,2.04913645487534,2.42755176515577,1.51076181570693,0.912392380975631,1.28482726513177,1.56478268869608,1.09012578190223,0.659058548203415,0.58328969722285,0.139986421625363,7.18762821824858,12.9192606664457,11.6057942721815,7.39406358113421,1.02903774414379,0.85960031981627,0.515672092277442,0.404632921719196,1.05798195854407,1.90149421051854,1.0165335962074,1.77858959222228,0.449949858640699,0.988866362566974,0,0,0.384218305321555,0.207379224616955,1.08004750665353,1.05162480675691,0,0.883474163806454,1.10241719293459,0.670918297127655,2.75765635983006,0,0.127687338085188,0.614426133024974,0.659431438650969,0.823388792421687,1.04182674111352,0.279182999001381,0,0.30559649555362,0.589257170947335,0.142371680799103,0.559198337475902,9.31432177998164,13.2250230186875,6.37701875143691,6.0229671388697,0,0,0,0,0.702222100658759,0.340860645156116,10.1316541795119,10.2468476607999,3.52108549441701,6.41632387071589,0,0,9.95858788651585,11.6545538118545,9.60496445528088,0.11418387971906,0.776813650941515,0,1.04091196059682,0.608930956624282,0.230615497256059,0.452167921657868,0.23517741427141,0.125666591329675,0.494389935468748,0.578397427679647,0,0.485300549842228,0.220841518460394,1.45462575940567,0,0.585561594023094,0.209446706813455,0.766371165625774,1.43778149407104,3.59941638596045,1.65191295194984,0.748953197024114,1.83000241127451,0.628271760564322,1.56441888173049,0.767146371990992,0.41557608911912,1.1356888414743,0,0.746441823660558,0,0.420883711772948,1.56144531555244,0,1.26043490863744,0.30140963567143,0.0680364991513279,0,0.281105173679186,0.258703370739016,0.646703978798527,1.13463648100692,0.703804496655795,1.09597866213787,2.22437799380478,1.39300866608867,1.4404749548556,0.199034266818493,2.80885274925294,3.3455227924913,0,0.414251545071004,2.34526059981096,1.98068267607116,0.710234206755631,0.983821158737019,0.308534225774757,0.232533944750408,0.268273401399619,0.817357396570186,0,0,0.162137619091711,0.146199987425332,0.878200461164203,0.268412837520744,1.68231958851302,0.617427674275707,0,0,2.13288250535234,0.464473343720877,0.515469845288373,0.403367049246685,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0.38992817423824,0,0.216138049874694,0,1.89667900953082,0.913988100877831,0,0.203651327845314,0.581857461502877,0.140271639780637,0.505892296994058,0.590440591918409,0,0.493588655687202,0,0.500535317148282,0.589676985339609,0,0.405720242777006,0.482354319504834,1.52775511068852,0.287696137450811,0.162135226775035,0,0,0,0.312037673114561,0.505157755894224,0.896987067609561,0,0.923765950833023,0.568474235311454,0.814824882210129,1.01847051465113,2.11221223459652,0.167506257441816,0.714130922658041,0.390267295715598,0.472905432318573,0.44292937929755,0.318909537314974,1.63863314715738,0.345369963731791,0.289298117163023,1.50791283939272,12.5098307278303,0.491764273019036,0.275936746304732,0.80275294993896,0.586058432961016,1.3114795630134,0,0,0,0.430846795465598,0.238968797952552,0.445597348164788,0,0,0.876767573733936,0.395287777946524,0,0.141940085208269,0.35613120733451,0.325773918707152,0.824850614862677,0,1.45668381692989,0.906970670894253,1.69744571780308,0.295301892880773,1.22974059177571,0.258428293168221,0.363533729477506,0,0.316036757935816,0,1.03135543248187,0.680879211507576,0.900305470156551,1.55230420539305,0.857348140126369,0.886701168211368,0.535106452806212,0.329098041204242,0.304464949114599,1.64270195644597,1.48282449604674,0.661585194164886,0.98931751764888,0.484393280087717,0.422190474497091,1.07435109602823,1.96969079694074,0.291480836629851,0.370850604021019,0.512612642393558,0.619160603889667,0.740778109478847,0.565105371014073,0.410082683163076,0.457556346413045,0.679913719975421,0.419854356970974,0.690999869022119,0,0.474503990371703,0.203319467126849,0.540026704109006,0.627264888043406,2.62035076495413,1.07891477107857,0.247960367176008,0.26175594198403,0.518459893167171,0,2.81846469342095,0.598066184175915,1.15820943319968,0,0.129159823477731,0.337912250981556,0.352071715937262,0.39061315453185,0.734015410979976,0.724752362478018,0.288030006257865,2.52808896502543,0.810900861160657,0.821687657318618,0.649604114888975,0.537080087002444,0.79472541912506,0.360586348559907,0.147689527174577,0.504832249740738,0.15241361331,0.604957110821043,0.584747284438515,0.09621184164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|phase1_expression=2.08193501236232,1.04692622291808,0.454999239389536,1.20985684522732,1.00179145989269,2.01455126294268,9.81173090501208,5.93967287831251,7.32101355188667,12.4054198950657,4.96532107853964,3.03134204182278,8.56003649656029,6.7313709862628,0.333109761815663,9.71881283471165,9.09430441566591,7.72882305127682,6.30726394586398,5.94145512517242,0.0850432901510698,0.695036658406197,13.5823890352246,9.5995453676044,6.42345986988076,0.57423196411502,1.7230479846363,3.44753972297422,4.94060890586572,0.504060259519861,2.88249663851896,2.54012269383853,0,0,0.288851619751275,0.498703936075477,1.02084678131185,2.09265815368454,1.5626706890476,3.14114246384279,1.17646297606203,2.04913645487534,2.42755176515577,1.51076181570693,0.912392380975631,1.28482726513177,1.56478268869608,1.09012578190223,0.659058548203415,0.58328969722285,0.139986421625363,7.18762821824858,12.9192606664457,11.6057942721815,7.39406358113421,1.02903774414379,0.85960031981627,0.515672092277442,0.404632921719196,1.05798195854407,1.90149421051854,1.0165335962074,1.77858959222228,0.449949858640699,0.988866362566974,0,0,0.384218305321555,0.207379224616955,1.08004750665353,1.05162480675691,0,0.883474163806454,1.10241719293459,0.670918297127655,2.75765635983006,0,0.127687338085188,0.614426133024974,0.659431438650969,0.823388792421687,1.04182674111352,0.279182999001381,0,0.30559649555362,0.589257170947335,0.142371680799103,0.559198337475902,9.31432177998164,13.2250230186875,6.37701875143691,6.0229671388697,0,0,0,0,0.702222100658759,0.340860645156116,10.1316541795119,10.2468476607999,3.52108549441701,6.41632387071589,0,0,9.95858788651585,11.6545538118545,9.60496445528088,0.11418387971906,0.776813650941515,0,1.04091196059682,0.608930956624282,0.230615497256059,0.452167921657868,0.23517741427141,0.125666591329675,0.494389935468748,0.578397427679647,0,0.485300549842228,0.220841518460394,1.45462575940567,0,0.585561594023094,0.209446706813455,0.766371165625774,1.43778149407104,3.59941638596045,1.65191295194984,0.748953197024114,1.83000241127451,0.628271760564322,1.56441888173049,0.767146371990992,0.41557608911912,1.1356888414743,0,0.746441823660558,0,0.420883711772948,1.56144531555244,0,1.26043490863744,0.30140963567143,0.0680364991513279,0,0.281105173679186,0.258703370739016,0.646703978798527,1.13463648100692,0.703804496655795,1.09597866213787,2.22437799380478,1.39300866608867,1.4404749548556,0.199034266818493,2.80885274925294,3.3455227924913,0,0.414251545071004,2.34526059981096,1.98068267607116,0.710234206755631,0.983821158737019,0.308534225774757,0.232533944750408,0.268273401399619,0.817357396570186,0,0,0.162137619091711,0.146199987425332,0.878200461164203,0.268412837520744,1.68231958851302,0.617427674275707,0,0,2.13288250535234,0.464473343720877,0.515469845288373,0.403367049246685,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0.38992817423824,0,0.216138049874694,0,1.89667900953082,0.913988100877831,0,0.203651327845314,0.581857461502877,0.140271639780637,0.505892296994058,0.590440591918409,0,0.493588655687202,0,0.500535317148282,0.589676985339609,0,0.405720242777006,0.482354319504834,1.52775511068852,0.287696137450811,0.162135226775035,0,0,0,0.312037673114561,0.505157755894224,0.896987067609561,0,0.923765950833023,0.568474235311454,0.814824882210129,1.01847051465113,2.11221223459652,0.167506257441816,0.714130922658041,0.390267295715598,0.472905432318573,0.44292937929755,0.318909537314974,1.63863314715738,0.345369963731791,0.289298117163023,1.50791283939272,12.5098307278303,0.491764273019036,0.275936746304732,0.80275294993896,0.586058432961016,1.3114795630134,0,0,0,0.430846795465598,0.238968797952552,0.445597348164788,0,0,0.876767573733936,0.395287777946524,0,0.141940085208269,0.35613120733451,0.325773918707152,0.824850614862677,0,1.45668381692989,0.906970670894253,1.69744571780308,0.295301892880773,1.22974059177571,0.258428293168221,0.363533729477506,0,0.316036757935816,0,1.03135543248187,0.680879211507576,0.900305470156551,1.55230420539305,0.857348140126369,0.886701168211368,0.535106452806212,0.329098041204242,0.304464949114599,1.64270195644597,1.48282449604674,0.661585194164886,0.98931751764888,0.484393280087717,0.422190474497091,1.07435109602823,1.96969079694074,0.291480836629851,0.370850604021019,0.512612642393558,0.619160603889667,0.740778109478847,0.565105371014073,0.410082683163076,0.457556346413045,0.679913719975421,0.419854356970974,0.690999869022119,0,0.474503990371703,0.203319467126849,0.540026704109006,0.627264888043406,2.62035076495413,1.07891477107857,0.247960367176008,0.26175594198403,0.518459893167171,0,2.81846469342095,0.598066184175915,1.15820943319968,0,0.129159823477731,0.337912250981556,0.352071715937262,0.39061315453185,0.734015410979976,0.724752362478018,0.288030006257865,2.52808896502543,0.810900861160657,0.821687657318618,0.649604114888975,0.537080087002444,0.79472541912506,0.360586348559907,0.147689527174577,0.504832249740738,0.15241361331,0.604957110821043,0.584747284438515,0.09621184164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| ||
|short_description=p1@Gm6788 | |short_description=p1@Gm6788 | ||
}} | }} | ||
Revision as of 12:39, 14 November 2012
| Short description: | p1@Gm6788 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Gm6788_5end |
| Coexpression cluster: | MCL_coexpression_mm9:308 |
| Association with transcript: | 8bp_to_uc012bkd.1_5end |
| EntrezGene: | Gm6788 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| motile cell | 4.93e-13 | 54 |
| hematopoietic cell | 5.43e-13 | 32 |
| hematopoietic oligopotent progenitor cell | 5.43e-13 | 32 |
| hematopoietic stem cell | 5.43e-13 | 32 |
| hematopoietic multipotent progenitor cell | 5.43e-13 | 32 |
| connective tissue cell | 9.76e-12 | 46 |
| mesenchymal cell | 9.76e-12 | 46 |
| hematopoietic lineage restricted progenitor cell | 1.68e-10 | 25 |
| lymphocyte | 9.31e-10 | 13 |
| common lymphoid progenitor | 9.31e-10 | 13 |
| lymphoid lineage restricted progenitor cell | 3.10e-09 | 12 |
| leukocyte | 4.63e-09 | 17 |
| nongranular leukocyte | 4.63e-09 | 17 |
| mature alpha-beta T cell | 1.57e-08 | 9 |
| alpha-beta T cell | 1.57e-08 | 9 |
| immature T cell | 1.57e-08 | 9 |
| mature T cell | 1.57e-08 | 9 |
| immature alpha-beta T cell | 1.57e-08 | 9 |
| T cell | 2.64e-08 | 11 |
| pro-T cell | 2.64e-08 | 11 |
| CD4-positive, alpha-beta T cell | 9.64e-08 | 8 |
| stem cell | 1.90e-07 | 97 |
| Ontology term | p-value | n |
|---|---|---|
| connective tissue | 9.76e-12 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
