Personal tools

FFCP PHASE1:Mm9::chr2:34730006..34730035,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|id=chr2:34730006..34730035,+
|id=chr2:34730006..34730035,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000182,2.11e-08,5;CL:0000066,5.35e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002365!3.56e-13!25;UBERON:0002330!3.56e-13!25;UBERON:0009854!1.22e-12!23;UBERON:0009856!1.22e-12!23;UBERON:0009569!1.78e-12!66;UBERON:0004119!7.85e-12!130;UBERON:0000925!7.85e-12!130;UBERON:0006595!7.85e-12!130;UBERON:0002107!8.51e-12!22;UBERON:0007499!8.51e-12!22;UBERON:0006925!8.51e-12!22;UBERON:0009497!8.51e-12!22;UBERON:0000015!8.51e-12!22;UBERON:0002423!8.51e-12!22;UBERON:0006235!8.51e-12!22;UBERON:0008835!8.51e-12!22;UBERON:0003894!8.51e-12!22;UBERON:0004161!8.51e-12!22;UBERON:0008836!8.51e-12!22;UBERON:0001007!1.01e-11!128;UBERON:0001555!1.01e-11!128;UBERON:0007026!1.01e-11!128;UBERON:0005172!4.33e-11!49;UBERON:0005173!4.33e-11!49;UBERON:0002417!4.33e-11!49;UBERON:0000916!4.33e-11!49;UBERON:0004921!9.65e-11!126;UBERON:0004185!9.65e-11!126;UBERON:0001008!1.09e-08!17;UBERON:0006554!1.17e-08!16;UBERON:0005177!4.83e-08!85;UBERON:0002113!8.95e-08!14;UBERON:0003918!8.95e-08!14;UBERON:0005095!8.95e-08!14;UBERON:0007687!8.95e-08!14;UBERON:0000160!2.06e-07!43
|ontology_enrichment_uberon=UBERON:0002365!3.56e-13!25;UBERON:0002330!3.56e-13!25;UBERON:0009854!1.22e-12!23;UBERON:0009856!1.22e-12!23;UBERON:0009569!1.78e-12!66;UBERON:0004119!7.85e-12!130;UBERON:0000925!7.85e-12!130;UBERON:0006595!7.85e-12!130;UBERON:0002107!8.51e-12!22;UBERON:0007499!8.51e-12!22;UBERON:0006925!8.51e-12!22;UBERON:0009497!8.51e-12!22;UBERON:0000015!8.51e-12!22;UBERON:0002423!8.51e-12!22;UBERON:0006235!8.51e-12!22;UBERON:0008835!8.51e-12!22;UBERON:0003894!8.51e-12!22;UBERON:0004161!8.51e-12!22;UBERON:0008836!8.51e-12!22;UBERON:0001007!1.01e-11!128;UBERON:0001555!1.01e-11!128;UBERON:0007026!1.01e-11!128;UBERON:0005172!4.33e-11!49;UBERON:0005173!4.33e-11!49;UBERON:0002417!4.33e-11!49;UBERON:0000916!4.33e-11!49;UBERON:0004921!9.65e-11!126;UBERON:0004185!9.65e-11!126;UBERON:0001008!1.09e-08!17;UBERON:0006554!1.17e-08!16;UBERON:0005177!4.83e-08!85;UBERON:0002113!8.95e-08!14;UBERON:0003918!8.95e-08!14;UBERON:0005095!8.95e-08!14;UBERON:0007687!8.95e-08!14;UBERON:0000160!2.06e-07!43
|ontology_enrichment_uberon_v019_2=UBERON:0009854,2.81e-15,23;UBERON:0009856,2.81e-15,23;UBERON:0002365,6.16e-15,25;UBERON:0002330,6.16e-15,25;UBERON:0002107,7.83e-14,22;UBERON:0007499,7.83e-14,22;UBERON:0006925,7.83e-14,22;UBERON:0009497,7.83e-14,22;UBERON:0000015,7.83e-14,22;UBERON:0002423,7.83e-14,22;UBERON:0006235,7.83e-14,22;UBERON:0008835,7.83e-14,22;UBERON:0003894,7.83e-14,22;UBERON:0004161,7.83e-14,22;UBERON:0008836,7.83e-14,22;UBERON:0004119,3.11e-13,118;UBERON:0000925,3.11e-13,118;UBERON:0006595,3.11e-13,118;UBERON:0001007,7.95e-13,116;UBERON:0001555,7.95e-13,116;UBERON:0007026,7.95e-13,116;UBERON:0005172,1.34e-12,49;UBERON:0005173,1.34e-12,49;UBERON:0002417,1.34e-12,49;UBERON:0000916,1.34e-12,49;UBERON:0000160,5.00e-12,31;UBERON:0004921,2.41e-11,114;UBERON:0009569,3.42e-10,66;UBERON:0003104,9.35e-10,61;UBERON:0009142,9.35e-10,61;UBERON:0005409,1.89e-07,47;UBERON:0005177,2.16e-07,79;UBERON:0006554,2.59e-07,18;UBERON:0000344,3.26e-07,15;UBERON:0002113,7.18e-07,14;UBERON:0003918,7.18e-07,14;UBERON:0011143,7.18e-07,14;UBERON:0005095,7.18e-07,14;UBERON:0007687,7.18e-07,14;UBERON:0003929,7.71e-07,55;UBERON:0001008,8.27e-07,19;UBERON:0002108,8.54e-07,4
|phase1_expression=0,6.2815573375085,4.09499315450582,0.30246421130683,0.500895729946347,3.52546471014969,4.90586545250604,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,3.19984845586813,6.8822784320151,5.7423196411502,9.47676391549965,8.18790684206378,12.5415456841207,2.01624103807945,8.20402889424627,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,1.15945795480671,7.74381489283248,6.79971333707751,10.2543606411185,11.695975514058,5.37632264516803,5.05599912474307,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0,3.4255163915718,0,0,0,0,0,0,0.23517741427141,0.125666591329675,4.94389935468748,0,0,0.161766849947409,0,0,18.6391761218122,0,0,0.510914110417183,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,0.407357455401265,0.995255764880744,4.29628689337247,0.841767423545896,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0.420579897128254,0,0.330418782983798,0.264450566663544,0.213288250535234,0,0.515469845288373,1.00841762311671,3.33567065767305,3.04361001780095,0.949058123089023,3.29397909448022,4.52403375840485,3.97912944082302,5.06906626509712,0.898819408654221,5.61958929674205,5.77509692437665,0.379335801906163,0.228497025219458,1.1270773567308,1.62921062276251,2.32742984601151,1.26244475802573,2.27651533647326,4.72352473534727,6.59394656933774,7.15703550746443,10.0793893209631,0,0,0.674586337154561,0.608580364165509,0.72353147925725,0.763877555344259,1.43848068725405,0.810676133875177,6.31491250332587,2.87536413054709,3.34926852901653,9.98520553966594,6.31447194867779,8.07288360848605,12.0610880340842,1.29327233116623,0,0,0,0,0.335012514883631,0.714130922658041,0.780534591431195,0.157635144106191,0.8858587585951,0.637819074629948,0.327726629431476,1.03610989119537,1.44649058581512,0,0,2.45882136509518,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0.329940245945071,0,0,0,0.188605079755898,0,0,0,0.727067458955011,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0591603543191,1.54369878638473,0,0,0.0603129249281559,0.119372344003136,0,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.269728692769641,0.495920734352016,0.523511883968059,20.0903208602279,1.24267862617385,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0,0,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0.772758376128762,1.87682475451182,0,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0.666740183404846,0.412070114477788,0.962757628775446,0.505394423527595,0.50695859978048,0.377252682772152,0.187283014939765,0.448176066834085,0.229741875822453,0.476293691283074,0.231768651889711,0.192909220463705,0,0.441596760403192,0.342869252385415,0.887379030796687,0.476872379894642,0.290692833264657,0.470546902076653,0,0.182927972872773,0.263069711437843,0.271608227691724,0.561142271657738,0.593175090620871,0.29551344712669,0,0,0.192906610981141,0,0.467863216890817,0.429742108096597,0,0.661774257358546,0
|phase1_expression=0,6.2815573375085,4.09499315450582,0.30246421130683,0.500895729946347,3.52546471014969,4.90586545250604,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,3.19984845586813,6.8822784320151,5.7423196411502,9.47676391549965,8.18790684206378,12.5415456841207,2.01624103807945,8.20402889424627,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,1.15945795480671,7.74381489283248,6.79971333707751,10.2543606411185,11.695975514058,5.37632264516803,5.05599912474307,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0,3.4255163915718,0,0,0,0,0,0,0.23517741427141,0.125666591329675,4.94389935468748,0,0,0.161766849947409,0,0,18.6391761218122,0,0,0.510914110417183,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,0.407357455401265,0.995255764880744,4.29628689337247,0.841767423545896,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0.420579897128254,0,0.330418782983798,0.264450566663544,0.213288250535234,0,0.515469845288373,1.00841762311671,3.33567065767305,3.04361001780095,0.949058123089023,3.29397909448022,4.52403375840485,3.97912944082302,5.06906626509712,0.898819408654221,5.61958929674205,5.77509692437665,0.379335801906163,0.228497025219458,1.1270773567308,1.62921062276251,2.32742984601151,1.26244475802573,2.27651533647326,4.72352473534727,6.59394656933774,7.15703550746443,10.0793893209631,0,0,0.674586337154561,0.608580364165509,0.72353147925725,0.763877555344259,1.43848068725405,0.810676133875177,6.31491250332587,2.87536413054709,3.34926852901653,9.98520553966594,6.31447194867779,8.07288360848605,12.0610880340842,1.29327233116623,0,0,0,0,0.335012514883631,0.714130922658041,0.780534591431195,0.157635144106191,0.8858587585951,0.637819074629948,0.327726629431476,1.03610989119537,1.44649058581512,0,0,2.45882136509518,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0.329940245945071,0,0,0,0.188605079755898,0,0,0,0.727067458955011,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0591603543191,1.54369878638473,0,0,0.0603129249281559,0.119372344003136,0,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.269728692769641,0.495920734352016,0.523511883968059,20.0903208602279,1.24267862617385,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0,0,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0.772758376128762,1.87682475451182,0,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0.666740183404846,0.412070114477788,0.962757628775446,0.505394423527595,0.50695859978048,0.377252682772152,0.187283014939765,0.448176066834085,0.229741875822453,0.476293691283074,0.231768651889711,0.192909220463705,0,0.441596760403192,0.342869252385415,0.887379030796687,0.476872379894642,0.290692833264657,0.470546902076653,0,0.182927972872773,0.263069711437843,0.271608227691724,0.561142271657738,0.593175090620871,0.29551344712669,0,0,0.192906610981141,0,0.467863216890817,0.429742108096597,0,0.661774257358546,0
|short_description=p2@D730039F16Rik
|short_description=p2@D730039F16Rik
}}
}}

Revision as of 02:16, 15 November 2012

Short description:p2@D730039F16Rik
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_D730039F16Rik_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: -2bp_to_ENSMUST00000028228, ENSMUST00000168663_5end
EntrezGene:D730039F16Rik
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@D730039F16Rik

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.09
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.91
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.88
GP2+ M cell, pool1.CNhs13228.11845-124H95.74
GP2+ M cell, pool2.CNhs13231.11846-124I19.48
GP2+ M cell, pool3.CNhs13240.11847-124I28.19
Ileum epithelium, pool1.CNhs13199.10252-104B912.54
Ileum epithelium, pool2.CNhs13232.10253-104C12.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C88.20
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F77.74
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.80
Mouse hepatocyte, donor3.CNhs12615.11637-122C810.25
Mouse hepatocyte, donor6.CNhs13090.11822-124F411.70
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.38
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.06
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.43
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A84.94
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H418.64
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B24.30
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D33.34
intestine, embryo E18.CNhs10526.1289-20F73.04
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E93.29
intestine, neonate N06.CNhs11102.688-20B84.52
intestine, neonate N07.CNhs11095.720-20F23.98
intestine, neonate N10.CNhs11098.755-23A55.07
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E35.62
intestine, neonate N30.CNhs11131.1384-42G15.78
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G71.26
kidney, neonate N10.CNhs11206.758-6D52.28
kidney, neonate N20.CNhs11113.832-19I14.72
kidney, neonate N25.CNhs11122.1353-25F36.59
kidney, neonate N30.CNhs11203.1385-42H17.16
liver, adult pregnant day01.CNhs10466.508-5B210.08
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G26.31
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B99.99
liver, neonate N20.CNhs11220.823-25A36.31
liver, neonate N25.CNhs11198.1368-26H18.07
liver, neonate N30.CNhs11106.1382-42D112.06
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I120.09
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hepatocyte2.11e-085
epithelial cell5.35e-0725

Uber anatomy
Ontology termp-valuen
digestive tract diverticulum2.81e-1523
sac2.81e-1523
exocrine gland6.16e-1525
exocrine system6.16e-1525
liver7.83e-1422
epithelial sac7.83e-1422
digestive gland7.83e-1422
epithelium of foregut-midgut junction7.83e-1422
anatomical boundary7.83e-1422
hepatobiliary system7.83e-1422
foregut-midgut junction7.83e-1422
hepatic diverticulum7.83e-1422
liver primordium7.83e-1422
septum transversum7.83e-1422
liver bud7.83e-1422
endoderm-derived structure3.11e-13118
endoderm3.11e-13118
presumptive endoderm3.11e-13118
digestive system7.95e-13116
digestive tract7.95e-13116
primitive gut7.95e-13116
abdomen element1.34e-1249
abdominal segment element1.34e-1249
abdominal segment of trunk1.34e-1249
abdomen1.34e-1249
intestine5.00e-1231
subdivision of digestive tract2.41e-11114
subdivision of trunk3.42e-1066
mesenchyme9.35e-1061
entire embryonic mesenchyme9.35e-1061
gastrointestinal system1.89e-0747
trunk region element2.16e-0779
urinary system structure2.59e-0718
mucosa3.26e-0715
kidney7.18e-0714
kidney mesenchyme7.18e-0714
upper urinary tract7.18e-0714
kidney rudiment7.18e-0714
kidney field7.18e-0714
gut epithelium7.71e-0755
renal system8.27e-0719
small intestine8.54e-074







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:34730006..34730035,%2B&oldid=2355698"