FFCP PHASE1:Mm9::chr3:153991607..153991627,-: Difference between revisions
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|id=chr3:153991607..153991627,- | |id=chr3:153991607..153991627,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002608,1.30e-21,3;CL:0002609,4.04e-11,6;CL:0002613,6.17e-10,3;CL:0000117,1.76e-07,23;CL:0000337,1.76e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000369!9.63e-09!5;UBERON:0002435!9.63e-09!5;UBERON:0000204!9.63e-09!5;UBERON:0010082!9.63e-09!5 | |ontology_enrichment_uberon=UBERON:0000369!9.63e-09!5;UBERON:0002435!9.63e-09!5;UBERON:0000204!9.63e-09!5;UBERON:0010082!9.63e-09!5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,3.38e-22,5;UBERON:0002435,3.38e-22,5;UBERON:0000204,3.38e-22,5;UBERON:0010082,3.38e-22,5;UBERON:0002420,5.27e-14,8;UBERON:0007245,5.27e-14,8;UBERON:0010009,5.27e-14,8;UBERON:0010011,5.27e-14,8;UBERON:0000454,5.27e-14,8;UBERON:0003528,3.27e-11,29;UBERON:0002791,3.27e-11,29;UBERON:0001893,3.27e-11,29;UBERON:0001954,1.31e-09,7;UBERON:0003022,1.31e-09,7;UBERON:0002421,1.31e-09,7;UBERON:0000349,1.31e-09,7;UBERON:0002600,1.31e-09,7;UBERON:0002020,1.74e-09,34;UBERON:0002780,3.36e-08,39;UBERON:0001890,3.36e-08,39;UBERON:0006240,3.36e-08,39;UBERON:0003080,5.57e-08,40;UBERON:0002616,7.29e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57230678351403,2.68367318851062,1.83843757322004,0,0,0,1.71452174049252,0.823388792421687,2.08365348222704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83000241127451,5.15182843662744,0.173824320192276,0.255715457330331,0.41557608911912,0.811206315338788,0,0,0,0,0.130120442962704,0.229902104433473,0,0,0.0680364991513279,0,0,0,0.215567992932842,0,0,0.43839146485515,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0.283076530788832,0,0,0,0,0,0.35613120733451,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720244376125241,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0.209718688851422,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.171853182343688,0,0,0.675022500231806,0,0,0,1.3492355185943,2.39414924040619,2.39027048055788,1.21553358534147,0.628839487883947,0.551530525350042,0.222246727801615,0,0.320919209591815,0.505394423527595,0,0.377252682772152,0.187283014939765,0.128050304809739,0.229741875822453,0.476293691283074,0.579421629724277,0.192909220463705,0.824171801606613,1.03039244094078,0.342869252385415,0.354951612318675,0.238436189947321,0.726732083161643,0.376437521661322,0.592302255241736,0,0.526139422875686,0.271608227691724,0,0.355905054372522,0.29551344712669,0,0.154936841185966,0.385813221962283,1.74867404556562,0.233931608445408,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57230678351403,2.68367318851062,1.83843757322004,0,0,0,1.71452174049252,0.823388792421687,2.08365348222704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83000241127451,5.15182843662744,0.173824320192276,0.255715457330331,0.41557608911912,0.811206315338788,0,0,0,0,0.130120442962704,0.229902104433473,0,0,0.0680364991513279,0,0,0,0.215567992932842,0,0,0.43839146485515,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0.283076530788832,0,0,0,0,0,0.35613120733451,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720244376125241,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0.209718688851422,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.171853182343688,0,0,0.675022500231806,0,0,0,1.3492355185943,2.39414924040619,2.39027048055788,1.21553358534147,0.628839487883947,0.551530525350042,0.222246727801615,0,0.320919209591815,0.505394423527595,0,0.377252682772152,0.187283014939765,0.128050304809739,0.229741875822453,0.476293691283074,0.579421629724277,0.192909220463705,0.824171801606613,1.03039244094078,0.342869252385415,0.354951612318675,0.238436189947321,0.726732083161643,0.376437521661322,0.592302255241736,0,0.526139422875686,0.271608227691724,0,0.355905054372522,0.29551344712669,0,0.154936841185966,0.385813221962283,1.74867404556562,0.233931608445408,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p2@Lhx8 | |short_description=p2@Lhx8 | ||
}} | }} |
Revision as of 02:23, 15 November 2012
Short description: | p2@Lhx8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Lhx8_5end |
Coexpression cluster: | MCL_coexpression_mm9:334 |
Association with transcript: | -9bp_to_ENSMUST00000167744_5end |
EntrezGene: | Lhx8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hippocampal neuron | 1.30e-21 | 3 |
neuron of cerebral cortex | 4.04e-11 | 6 |
striatum neuron | 6.17e-10 | 3 |
CNS neuron (sensu Vertebrata) | 1.76e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.76e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 3.38e-22 | 5 |
striatum | 3.38e-22 | 5 |
ventral part of telencephalon | 3.38e-22 | 5 |
future corpus striatum | 3.38e-22 | 5 |
basal ganglion | 5.27e-14 | 8 |
nuclear complex of neuraxis | 5.27e-14 | 8 |
aggregate regional part of brain | 5.27e-14 | 8 |
collection of basal ganglia | 5.27e-14 | 8 |
cerebral subcortex | 5.27e-14 | 8 |
brain grey matter | 3.27e-11 | 29 |
regional part of telencephalon | 3.27e-11 | 29 |
telencephalon | 3.27e-11 | 29 |
Ammon's horn | 1.31e-09 | 7 |
lobe parts of cerebral cortex | 1.31e-09 | 7 |
hippocampal formation | 1.31e-09 | 7 |
limbic system | 1.31e-09 | 7 |
limbic lobe | 1.31e-09 | 7 |
gray matter | 1.74e-09 | 34 |
regional part of forebrain | 3.36e-08 | 39 |
forebrain | 3.36e-08 | 39 |
future forebrain | 3.36e-08 | 39 |
anterior neural tube | 5.57e-08 | 40 |
regional part of brain | 7.29e-07 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.