FFCP PHASE1:Hg19::chr8:49194425..49194429,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0002539!1.40e-14!10;CL:0000359!4.43e-13!32;CL:0000569!4.12e-10!4;CL:0000011!4.12e-10!4;CL:0000048!1.84e-09!430;CL:0000192!1.98e-09!42;CL:0000514!1.98e-09!42;CL:0000723!3.38e-09!436;CL:0000680!4.81e-09!57;CL:0000056!4.81e-09!57;CL:0000355!4.81e-09!57;CL:0000034!7.41e-09!444;CL:0000187!3.47e-08!54;CL:0000183!2.74e-07!59;CL:0000393!3.97e-07!60;CL:0000211!3.97e-07!60 | |ontology_enrichment_celltype=CL:0002539!1.40e-14!10;CL:0000359!4.43e-13!32;CL:0000569!4.12e-10!4;CL:0000011!4.12e-10!4;CL:0000048!1.84e-09!430;CL:0000192!1.98e-09!42;CL:0000514!1.98e-09!42;CL:0000723!3.38e-09!436;CL:0000680!4.81e-09!57;CL:0000056!4.81e-09!57;CL:0000355!4.81e-09!57;CL:0000034!7.41e-09!444;CL:0000187!3.47e-08!54;CL:0000183!2.74e-07!59;CL:0000393!3.97e-07!60;CL:0000211!3.97e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000569;4.28e-34;4!CL:0000048;4.71e-10;58!CL:0000723;7.53e-10;61!CL:1000306;1.32e-09;4!CL:0002547;1.32e-09;4!CL:0002494;2.45e-09;16!CL:0000134;3.34e-08;55 | |ontology_enrichment_celltype_v019=CL:0000569;4.28e-34;4!CL:0000048;4.71e-10;58!CL:0000723;7.53e-10;61!CL:1000306;1.32e-09;4!CL:0002547;1.32e-09;4!CL:0002494;2.45e-09;16!CL:0000134;3.34e-08;55 | ||
|ontology_enrichment_celltype_v019_2=CL:0000569,4.28e-34,4;CL:0000011,4.28e-34,4;CL:1000306,1.32e-09,4;CL:0002547,1.32e-09,4;CL:0002494,2.45e-09,16 | |||
|ontology_enrichment_development_v019=CL:0000011;4.28e-34;4 | |ontology_enrichment_development_v019=CL:0000011;4.28e-34;4 | ||
|ontology_enrichment_disease=DOID:2394!7.75e-34!14;DOID:120!1.10e-19!27;DOID:193!3.85e-18!29 | |ontology_enrichment_disease=DOID:2394!7.75e-34!14;DOID:120!1.10e-19!27;DOID:193!3.85e-18!29 | ||
|ontology_enrichment_disease_v019=DOID:2394;8.88e-22;14!DOID:120;1.07e-11;27!DOID:193;6.10e-11;29 | |ontology_enrichment_disease_v019=DOID:2394;8.88e-22;14!DOID:120;1.07e-11;27!DOID:193;6.10e-11;29 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,8.88e-22,14;DOID:120,1.07e-11,27;DOID:193,6.10e-11,29 | |||
|ontology_enrichment_uberon=UBERON:0002118!1.68e-20!5;UBERON:0004532!1.68e-20!5;UBERON:0000992!2.10e-19!13;UBERON:0004237!1.40e-14!10;UBERON:0004695!1.40e-14!10;UBERON:0002111!1.40e-14!10;UBERON:0004178!1.40e-14!10;UBERON:0004573!8.11e-13!33;UBERON:0004571!8.11e-13!33;UBERON:0000991!1.75e-11!21;UBERON:0009196!1.75e-11!21;UBERON:0009117!1.75e-11!21;UBERON:0005564!1.75e-11!21;UBERON:0004176!6.71e-11!22;UBERON:0004290!9.61e-11!70;UBERON:0002119!2.44e-10!4;UBERON:0004531!2.44e-10!4;UBERON:0000486!7.02e-10!82;UBERON:0000055!1.02e-09!69;UBERON:0001637!1.39e-09!42;UBERON:0003509!1.39e-09!42;UBERON:0004572!1.39e-09!42;UBERON:0001135!1.73e-09!15;UBERON:0000947!6.66e-09!21;UBERON:0010191!6.66e-09!21;UBERON:0000914!1.65e-08!83;UBERON:0002329!1.65e-08!83;UBERON:0003077!1.65e-08!83;UBERON:0003059!1.65e-08!83;UBERON:0007282!1.65e-08!83;UBERON:0009618!1.65e-08!83;UBERON:0007285!1.65e-08!83;UBERON:0001134!2.84e-08!61;UBERON:0002036!2.84e-08!61;UBERON:0003082!2.84e-08!61;UBERON:0002049!4.50e-08!79;UBERON:0007798!4.50e-08!79;UBERON:0002385!6.32e-08!63;UBERON:0001015!6.32e-08!63;UBERON:0000383!6.32e-08!63;UBERON:0004535!1.05e-07!110;UBERON:0003134!1.48e-07!37;UBERON:0000474!1.48e-07!37;UBERON:0004872!1.54e-07!84;UBERON:0001009!2.13e-07!113;UBERON:0001981!3.04e-07!60;UBERON:0007500!3.04e-07!60;UBERON:0004537!3.04e-07!60;UBERON:0006965!3.04e-07!60;UBERON:0002323!6.56e-07!46 | |ontology_enrichment_uberon=UBERON:0002118!1.68e-20!5;UBERON:0004532!1.68e-20!5;UBERON:0000992!2.10e-19!13;UBERON:0004237!1.40e-14!10;UBERON:0004695!1.40e-14!10;UBERON:0002111!1.40e-14!10;UBERON:0004178!1.40e-14!10;UBERON:0004573!8.11e-13!33;UBERON:0004571!8.11e-13!33;UBERON:0000991!1.75e-11!21;UBERON:0009196!1.75e-11!21;UBERON:0009117!1.75e-11!21;UBERON:0005564!1.75e-11!21;UBERON:0004176!6.71e-11!22;UBERON:0004290!9.61e-11!70;UBERON:0002119!2.44e-10!4;UBERON:0004531!2.44e-10!4;UBERON:0000486!7.02e-10!82;UBERON:0000055!1.02e-09!69;UBERON:0001637!1.39e-09!42;UBERON:0003509!1.39e-09!42;UBERON:0004572!1.39e-09!42;UBERON:0001135!1.73e-09!15;UBERON:0000947!6.66e-09!21;UBERON:0010191!6.66e-09!21;UBERON:0000914!1.65e-08!83;UBERON:0002329!1.65e-08!83;UBERON:0003077!1.65e-08!83;UBERON:0003059!1.65e-08!83;UBERON:0007282!1.65e-08!83;UBERON:0009618!1.65e-08!83;UBERON:0007285!1.65e-08!83;UBERON:0001134!2.84e-08!61;UBERON:0002036!2.84e-08!61;UBERON:0003082!2.84e-08!61;UBERON:0002049!4.50e-08!79;UBERON:0007798!4.50e-08!79;UBERON:0002385!6.32e-08!63;UBERON:0001015!6.32e-08!63;UBERON:0000383!6.32e-08!63;UBERON:0004535!1.05e-07!110;UBERON:0003134!1.48e-07!37;UBERON:0000474!1.48e-07!37;UBERON:0004872!1.54e-07!84;UBERON:0001009!2.13e-07!113;UBERON:0001981!3.04e-07!60;UBERON:0007500!3.04e-07!60;UBERON:0004537!3.04e-07!60;UBERON:0006965!3.04e-07!60;UBERON:0002323!6.56e-07!46 | ||
|ontology_enrichment_uberon_v019=UBERON:0002119;1.38e-33;4!UBERON:0000992;4.15e-11;13!UBERON:0004797;1.32e-09;4!UBERON:0000415;1.32e-09;4!UBERON:0007240;1.32e-09;4!UBERON:0005742;1.32e-09;4!UBERON:0005734;1.32e-09;4!UBERON:0004664;1.32e-09;4!UBERON:0004663;1.32e-09;4!UBERON:0000991;3.05e-07;21!UBERON:0000948;4.79e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0002119;1.38e-33;4!UBERON:0000992;4.15e-11;13!UBERON:0004797;1.32e-09;4!UBERON:0000415;1.32e-09;4!UBERON:0007240;1.32e-09;4!UBERON:0005742;1.32e-09;4!UBERON:0005734;1.32e-09;4!UBERON:0004664;1.32e-09;4!UBERON:0004663;1.32e-09;4!UBERON:0000991;3.05e-07;21!UBERON:0000948;4.79e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002119,1.17e-33,4;UBERON:0000992,3.94e-11,13;UBERON:0000415,1.32e-09,4;UBERON:0007240,1.32e-09,4;UBERON:0005742,1.32e-09,4;UBERON:0005734,1.32e-09,4;UBERON:0004664,1.32e-09,4;UBERON:0004663,1.32e-09,4;UBERON:0000991,2.95e-07,21;UBERON:0009196,2.95e-07,21;UBERON:0009117,2.95e-07,21;UBERON:0005564,2.95e-07,21;UBERON:0004176,5.74e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04541115870403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0.127612712494584,0,0,0.94443704049192,0.6970372701606,0.308033580176089,0,0.869932992075073,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.467426619694449,0,0.189403005275089,0,0,4.34796129954155,0,0.15543720058278,4.43565449968902,1.59296767163702,1.79921244865442,0.621051827505038,0,0.265841714557995,0,1.35231848097497,0.380805212168795,0.813741466409323,0.909243296012797,0.107410557042488,0.464033759878494,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340853619036631,0,0,0.93061915699296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04541115870403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0.127612712494584,0,0,0.94443704049192,0.6970372701606,0.308033580176089,0,0.869932992075073,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.467426619694449,0,0.189403005275089,0,0,4.34796129954155,0,0.15543720058278,4.43565449968902,1.59296767163702,1.79921244865442,0.621051827505038,0,0.265841714557995,0,1.35231848097497,0.380805212168795,0.813741466409323,0.909243296012797,0.107410557042488,0.464033759878494,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340853619036631,0,0,0.93061915699296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:49194425..49194429,+ | |short_description=p@chr8:49194425..49194429,+ | ||
}} | }} |
Revision as of 04:19, 16 November 2012
Short description: | p@chr8:49194425..49194429, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:49194425..49194429, + |
Coexpression cluster: | C3373_mesenchymal_Fibroblast_normal_Smooth_mucinous_Preadipocyte_serous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 4.28e-34 | 4 |
migratory trunk neural crest cell | 4.28e-34 | 4 |
fibroblast of tunica adventitia of artery | 1.32e-09 | 4 |
fibroblast of the aortic adventitia | 1.32e-09 | 4 |
cardiocyte | 2.45e-09 | 16 |
Ontology term | p-value | n |
---|---|---|
left ovary | 1.17e-33 | 4 |
female gonad | 3.94e-11 | 13 |
artery wall | 1.32e-09 | 4 |
tunica adventitia of artery | 1.32e-09 | 4 |
adventitia | 1.32e-09 | 4 |
tunica adventitia of blood vessel | 1.32e-09 | 4 |
aorta tunica adventitia | 1.32e-09 | 4 |
aorta wall | 1.32e-09 | 4 |
gonad | 2.95e-07 | 21 |
indifferent external genitalia | 2.95e-07 | 21 |
indifferent gonad | 2.95e-07 | 21 |
gonad primordium | 2.95e-07 | 21 |
external genitalia | 5.74e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.88e-22 | 14 |
female reproductive organ cancer | 1.07e-11 | 27 |
reproductive organ cancer | 6.10e-11 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.