FFCP PHASE1:Hg19::chr6:46922535..46922542,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0005020!3.55e-13!6;CL:0002138!3.55e-13!6;CL:0005022!3.55e-13!6;CL:0002139!4.01e-07!24;CL:0000115!5.36e-07!35 | |ontology_enrichment_celltype=CL:0005020!3.55e-13!6;CL:0002138!3.55e-13!6;CL:0005022!3.55e-13!6;CL:0002139!4.01e-07!24;CL:0000115!5.36e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0002138;3.40e-43;6!CL:0002144;3.86e-38;3!CL:0002139;1.00e-29;24!CL:0000115;2.28e-16;36!CL:0002078;5.64e-13;45!CL:0000213;8.35e-10;58!CL:0000215;8.35e-10;58!CL:0002594;2.43e-08;4!CL:0000071;3.24e-07;18 | |ontology_enrichment_celltype_v019=CL:0002138;3.40e-43;6!CL:0002144;3.86e-38;3!CL:0002139;1.00e-29;24!CL:0000115;2.28e-16;36!CL:0002078;5.64e-13;45!CL:0000213;8.35e-10;58!CL:0000215;8.35e-10;58!CL:0002594;2.43e-08;4!CL:0000071;3.24e-07;18 | ||
|ontology_enrichment_celltype_v019_2=CL:0005020,3.16e-43,6;CL:0002138,3.16e-43,6;CL:0005022,3.16e-43,6;CL:0002144,3.19e-38,3;CL:0002139,9.15e-30,24;CL:0000115,5.17e-20,36;CL:0002078,4.25e-16,45;CL:0000213,1.42e-12,58;CL:0000215,1.42e-12,58;CL:0000222,1.20e-08,121;CL:0002594,2.61e-08,4;CL:0000071,3.14e-07,18;CL:0002546,3.14e-07,18 | |||
|ontology_enrichment_development_v019=CL:0005022;3.40e-43;6!CL:0002546;3.24e-07;18 | |ontology_enrichment_development_v019=CL:0005022;3.40e-43;6!CL:0002546;3.24e-07;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.19e-16!115;UBERON:0002465!7.20e-11!10;UBERON:0004111!5.42e-10!241;UBERON:0001473!9.04e-10!8;UBERON:0004536!9.04e-10!8;UBERON:0006558!9.04e-10!8;UBERON:0000477!1.83e-09!286;UBERON:0002791!2.66e-07!33;UBERON:0000025!4.62e-07!194;UBERON:0001893!4.93e-07!34;UBERON:0000341!5.56e-07!2 | |ontology_enrichment_uberon=UBERON:0007023!3.19e-16!115;UBERON:0002465!7.20e-11!10;UBERON:0004111!5.42e-10!241;UBERON:0001473!9.04e-10!8;UBERON:0004536!9.04e-10!8;UBERON:0006558!9.04e-10!8;UBERON:0000477!1.83e-09!286;UBERON:0002791!2.66e-07!33;UBERON:0000025!4.62e-07!194;UBERON:0001893!4.93e-07!34;UBERON:0000341!5.56e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0010523;3.86e-38;3!UBERON:0001915;3.86e-38;3!UBERON:0001982;3.86e-38;3!UBERON:0001473;1.21e-32;8!UBERON:0004536;1.21e-32;8!UBERON:0006558;1.21e-32;8!UBERON:0002465;2.67e-26;10!UBERON:0000055;1.14e-10;65!UBERON:0002405;3.11e-10;27!UBERON:0002049;1.06e-09;75!UBERON:0007798;1.06e-09;75!UBERON:0001310;2.43e-08;4!UBERON:0004535;2.66e-07;109!UBERON:0004638;3.24e-07;18!UBERON:0001986;3.24e-07;18!UBERON:0004852;3.24e-07;18 | |ontology_enrichment_uberon_v019=UBERON:0010523;3.86e-38;3!UBERON:0001915;3.86e-38;3!UBERON:0001982;3.86e-38;3!UBERON:0001473;1.21e-32;8!UBERON:0004536;1.21e-32;8!UBERON:0006558;1.21e-32;8!UBERON:0002465;2.67e-26;10!UBERON:0000055;1.14e-10;65!UBERON:0002405;3.11e-10;27!UBERON:0002049;1.06e-09;75!UBERON:0007798;1.06e-09;75!UBERON:0001310;2.43e-08;4!UBERON:0004535;2.66e-07;109!UBERON:0004638;3.24e-07;18!UBERON:0001986;3.24e-07;18!UBERON:0004852;3.24e-07;18 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,3.19e-38,3;UBERON:0001915,3.19e-38,3;UBERON:0001982,3.19e-38,3;UBERON:0001473,1.15e-32,8;UBERON:0004536,1.15e-32,8;UBERON:0006558,1.15e-32,8;UBERON:0002465,2.55e-26,10;UBERON:0000055,3.20e-15,68;UBERON:0002049,2.64e-13,78;UBERON:0007798,2.64e-13,78;UBERON:0004535,1.39e-09,109;UBERON:0001009,2.49e-09,112;UBERON:0001310,2.61e-08,4;UBERON:0004638,3.14e-07,18;UBERON:0001986,3.14e-07,18;UBERON:0004852,3.14e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39308490587859,13.1633517194083,5.69025041699939,1.61131726843659,0,1.70843440283719,0,0,0.357198913136319,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0.433099343283221,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680374821106063,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405820753925408,0,0,0,0,1.07001315444375,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0.201550417460179,0.360299883542404,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,4.09789677955831,0.629455057619977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640724475406168,0.943225830597996,0.828478110694391,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.271878931907327,0.0657727735628491,0,0,0,0,0,0,0,0,0,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0.452888530700021,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0.476128862927481,0,0.186224142887574,0.112131862580613,0,0.202117188958219,0.217716747896961,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39308490587859,13.1633517194083,5.69025041699939,1.61131726843659,0,1.70843440283719,0,0,0.357198913136319,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0.433099343283221,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680374821106063,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405820753925408,0,0,0,0,1.07001315444375,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0.201550417460179,0.360299883542404,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,4.09789677955831,0.629455057619977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640724475406168,0.943225830597996,0.828478110694391,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.271878931907327,0.0657727735628491,0,0,0,0,0,0,0,0,0,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0.452888530700021,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0.476128862927481,0,0.186224142887574,0.112131862580613,0,0.202117188958219,0.217716747896961,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | ||
|short_description=p9@GPR116 | |short_description=p9@GPR116 | ||
}} | }} |
Revision as of 09:39, 17 November 2012
Short description: | p9@GPR116 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_GPR116_5end |
Coexpression cluster: | C1679_Endothelial_retina_Hepatic_lung_Renal_kidney_gall |
Association with transcript: | 132bp_to_ENST00000452370, NM_015234, uc003oyq.3_5end |
EntrezGene: | GPR116 |
HGNC: | 19030 |
UniProt: | Q8IZF2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 3.16e-43 | 6 |
endothelial cell of lymphatic vessel | 3.16e-43 | 6 |
vascular lymphangioblast | 3.16e-43 | 6 |
capillary endothelial cell | 3.19e-38 | 3 |
endothelial cell of vascular tree | 9.15e-30 | 24 |
endothelial cell | 5.17e-20 | 36 |
meso-epithelial cell | 4.25e-16 | 45 |
lining cell | 1.42e-12 | 58 |
barrier cell | 1.42e-12 | 58 |
mesodermal cell | 1.20e-08 | 121 |
smooth muscle cell of the umbilical artery | 2.61e-08 | 4 |
blood vessel endothelial cell | 3.14e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.14e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 3.19e-38 | 3 |
endothelium of capillary | 3.19e-38 | 3 |
capillary | 3.19e-38 | 3 |
lymphatic vessel | 1.15e-32 | 8 |
lymph vasculature | 1.15e-32 | 8 |
lymphatic part of lymphoid system | 1.15e-32 | 8 |
lymphoid system | 2.55e-26 | 10 |
vessel | 3.20e-15 | 68 |
vasculature | 2.64e-13 | 78 |
vascular system | 2.64e-13 | 78 |
cardiovascular system | 1.39e-09 | 109 |
circulatory system | 2.49e-09 | 112 |
umbilical artery | 2.61e-08 | 4 |
blood vessel endothelium | 3.14e-07 | 18 |
endothelium | 3.14e-07 | 18 |
cardiovascular system endothelium | 3.14e-07 | 18 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.