FFCP PHASE1:Hg19::chr4:142134015..142134022,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;2.42e-50;1!UBERON:0008801;3.99e-50;1!UBERON:0010227;6.58e-50;1 | |ontology_enrichment_development_v019=UBERON:0006298;2.42e-50;1!UBERON:0008801;3.99e-50;1!UBERON:0010227;6.58e-50;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.91e-42!115;UBERON:0001049!5.37e-14!57;UBERON:0005068!5.37e-14!57;UBERON:0006241!5.37e-14!57;UBERON:0007135!5.37e-14!57;UBERON:0003075!1.87e-13!86;UBERON:0007284!1.87e-13!86;UBERON:0001829!2.29e-13!2;UBERON:0005743!3.48e-13!86;UBERON:0002346!1.02e-12!90;UBERON:0001017!4.26e-12!82;UBERON:0002791!6.93e-12!33;UBERON:0000073!1.18e-11!94;UBERON:0001016!1.18e-11!94;UBERON:0002020!1.22e-11!34;UBERON:0003528!1.22e-11!34;UBERON:0002780!1.26e-11!41;UBERON:0001890!1.26e-11!41;UBERON:0006240!1.26e-11!41;UBERON:0001893!1.67e-11!34;UBERON:0003080!2.58e-11!42;UBERON:0002616!2.77e-11!59;UBERON:0000955!7.06e-11!69;UBERON:0006238!7.06e-11!69;UBERON:0000349!7.80e-11!5;UBERON:0000153!2.03e-10!129;UBERON:0007811!2.03e-10!129;UBERON:0001044!7.63e-10!6;UBERON:0003293!7.63e-10!6;UBERON:0003294!7.63e-10!6;UBERON:0010047!7.63e-10!6;UBERON:0000167!7.63e-10!6;UBERON:0000033!1.05e-09!123;UBERON:0004121!3.57e-09!169;UBERON:0003056!5.74e-09!61;UBERON:0000924!7.16e-09!173;UBERON:0006601!7.16e-09!173;UBERON:0006331!8.41e-09!3;UBERON:0002619!2.84e-08!22;UBERON:0001736!1.55e-07!1;UBERON:0006298!1.55e-07!1;UBERON:0001831!1.65e-07!1;UBERON:0001567!1.65e-07!1;UBERON:0008801!1.65e-07!1;UBERON:0001869!1.69e-07!32;UBERON:0002079!1.75e-07!1;UBERON:0001301!2.10e-07!1;UBERON:0002135!2.23e-07!1;UBERON:0000956!2.96e-07!25;UBERON:0000203!2.96e-07!25;UBERON:0002298!3.47e-07!8;UBERON:0002038!4.31e-07!1;UBERON:0009661!4.31e-07!1;UBERON:0001882!5.45e-07!1;UBERON:0005403!5.45e-07!1;UBERON:0002363!5.78e-07!1;UBERON:0007647!5.78e-07!1;UBERON:0010115!5.78e-07!1;UBERON:0006834!6.12e-07!1;UBERON:0002336!9.18e-07!1;UBERON:0001018!9.18e-07!1;UBERON:0002473!9.18e-07!1;UBERON:0005340!9.18e-07!1;UBERON:0002316!9.18e-07!1;UBERON:0003544!9.18e-07!1;UBERON:0001020!9.18e-07!1;UBERON:0005970!9.18e-07!1;UBERON:0002437!9.18e-07!1 | |ontology_enrichment_uberon=UBERON:0007023!1.91e-42!115;UBERON:0001049!5.37e-14!57;UBERON:0005068!5.37e-14!57;UBERON:0006241!5.37e-14!57;UBERON:0007135!5.37e-14!57;UBERON:0003075!1.87e-13!86;UBERON:0007284!1.87e-13!86;UBERON:0001829!2.29e-13!2;UBERON:0005743!3.48e-13!86;UBERON:0002346!1.02e-12!90;UBERON:0001017!4.26e-12!82;UBERON:0002791!6.93e-12!33;UBERON:0000073!1.18e-11!94;UBERON:0001016!1.18e-11!94;UBERON:0002020!1.22e-11!34;UBERON:0003528!1.22e-11!34;UBERON:0002780!1.26e-11!41;UBERON:0001890!1.26e-11!41;UBERON:0006240!1.26e-11!41;UBERON:0001893!1.67e-11!34;UBERON:0003080!2.58e-11!42;UBERON:0002616!2.77e-11!59;UBERON:0000955!7.06e-11!69;UBERON:0006238!7.06e-11!69;UBERON:0000349!7.80e-11!5;UBERON:0000153!2.03e-10!129;UBERON:0007811!2.03e-10!129;UBERON:0001044!7.63e-10!6;UBERON:0003293!7.63e-10!6;UBERON:0003294!7.63e-10!6;UBERON:0010047!7.63e-10!6;UBERON:0000167!7.63e-10!6;UBERON:0000033!1.05e-09!123;UBERON:0004121!3.57e-09!169;UBERON:0003056!5.74e-09!61;UBERON:0000924!7.16e-09!173;UBERON:0006601!7.16e-09!173;UBERON:0006331!8.41e-09!3;UBERON:0002619!2.84e-08!22;UBERON:0001736!1.55e-07!1;UBERON:0006298!1.55e-07!1;UBERON:0001831!1.65e-07!1;UBERON:0001567!1.65e-07!1;UBERON:0008801!1.65e-07!1;UBERON:0001869!1.69e-07!32;UBERON:0002079!1.75e-07!1;UBERON:0001301!2.10e-07!1;UBERON:0002135!2.23e-07!1;UBERON:0000956!2.96e-07!25;UBERON:0000203!2.96e-07!25;UBERON:0002298!3.47e-07!8;UBERON:0002038!4.31e-07!1;UBERON:0009661!4.31e-07!1;UBERON:0001882!5.45e-07!1;UBERON:0005403!5.45e-07!1;UBERON:0002363!5.78e-07!1;UBERON:0007647!5.78e-07!1;UBERON:0010115!5.78e-07!1;UBERON:0006834!6.12e-07!1;UBERON:0002336!9.18e-07!1;UBERON:0001018!9.18e-07!1;UBERON:0002473!9.18e-07!1;UBERON:0005340!9.18e-07!1;UBERON:0002316!9.18e-07!1;UBERON:0003544!9.18e-07!1;UBERON:0001020!9.18e-07!1;UBERON:0005970!9.18e-07!1;UBERON:0002437!9.18e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.55e-98;2!UBERON:0001044;2.58e-74;6!UBERON:0003293;2.58e-74;6!UBERON:0003294;2.58e-74;6!UBERON:0010047;2.58e-74;6!UBERON:0003408;2.58e-74;6!UBERON:0000167;2.58e-74;6!UBERON:0001736;2.42e-50;1!UBERON:0001831;3.99e-50;1!UBERON:0001567;3.99e-50;1!UBERON:0002079;6.58e-50;1!UBERON:0001041;1.46e-32;14!UBERON:0004089;7.14e-26;2!UBERON:0002081;9.18e-26;2!UBERON:0000161;2.73e-24;19!UBERON:0000166;2.73e-24;19!UBERON:0004151;1.12e-17;3!UBERON:0000165;8.05e-17;28!UBERON:0002365;5.90e-15;31!UBERON:0002330;5.90e-15;31!UBERON:0004921;1.58e-12;33!UBERON:0007811;1.88e-08;52!UBERON:0000153;7.77e-08;54!UBERON:0000033;8.86e-08;50!UBERON:0001444;3.70e-07;48!UBERON:0001555;3.72e-07;54!UBERON:0002530;7.31e-07;57 | |ontology_enrichment_uberon_v019=UBERON:0001829;1.55e-98;2!UBERON:0001044;2.58e-74;6!UBERON:0003293;2.58e-74;6!UBERON:0003294;2.58e-74;6!UBERON:0010047;2.58e-74;6!UBERON:0003408;2.58e-74;6!UBERON:0000167;2.58e-74;6!UBERON:0001736;2.42e-50;1!UBERON:0001831;3.99e-50;1!UBERON:0001567;3.99e-50;1!UBERON:0002079;6.58e-50;1!UBERON:0001041;1.46e-32;14!UBERON:0004089;7.14e-26;2!UBERON:0002081;9.18e-26;2!UBERON:0000161;2.73e-24;19!UBERON:0000166;2.73e-24;19!UBERON:0004151;1.12e-17;3!UBERON:0000165;8.05e-17;28!UBERON:0002365;5.90e-15;31!UBERON:0002330;5.90e-15;31!UBERON:0004921;1.58e-12;33!UBERON:0007811;1.88e-08;52!UBERON:0000153;7.77e-08;54!UBERON:0000033;8.86e-08;50!UBERON:0001444;3.70e-07;48!UBERON:0001555;3.72e-07;54!UBERON:0002530;7.31e-07;57 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.55e-98,2;UBERON:0001044,2.58e-74,6;UBERON:0003293,2.58e-74,6;UBERON:0003294,2.58e-74,6;UBERON:0010047,2.58e-74,6;UBERON:0000167,2.58e-74,6;UBERON:0001736,2.42e-50,1;UBERON:0006298,2.42e-50,1;UBERON:0001831,3.99e-50,1;UBERON:0001567,3.99e-50,1;UBERON:0008801,3.99e-50,1;UBERON:0002079,6.58e-50,1;UBERON:0003408,4.18e-45,10;UBERON:0004089,7.14e-26,2;UBERON:0002081,9.18e-26,2;UBERON:0010227,9.18e-26,2;UBERON:0000166,3.99e-21,22;UBERON:0004151,1.12e-17,3;UBERON:0000165,2.82e-16,29;UBERON:0000930,2.82e-16,29;UBERON:0002365,2.73e-15,31;UBERON:0002330,2.73e-15,31;UBERON:0000161,2.66e-13,36;UBERON:0001444,5.14e-10,49;UBERON:0000033,7.15e-09,56;UBERON:0002530,1.83e-08,59;UBERON:0002553,3.25e-08,61;UBERON:0000153,4.28e-08,62;UBERON:0007811,4.28e-08,62;UBERON:0007023,8.86e-08,114;UBERON:0001004,6.51e-07,74 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,4.38606213485746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,8.17431981758527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,5.04602211744995,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.20686599172379,0,0.23806443146374,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,4.38606213485746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,8.17431981758527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,5.04602211744995,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.20686599172379,0,0.23806443146374,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p14@RNF150 | |short_description=p14@RNF150 | ||
}} | }} |
Revision as of 02:05, 18 November 2012
Short description: | p14@RNF150 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_RNF150_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | 8bp_to_ENST00000420921_5end |
EntrezGene: | RNF150 |
HGNC: | 23138 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 1.55e-98 | 2 |
saliva-secreting gland | 2.58e-74 | 6 |
gland of oral region | 2.58e-74 | 6 |
gland of foregut | 2.58e-74 | 6 |
oral gland | 2.58e-74 | 6 |
oral cavity | 2.58e-74 | 6 |
submandibular gland | 2.42e-50 | 1 |
submandibular gland primordium | 2.42e-50 | 1 |
parotid gland | 3.99e-50 | 1 |
cheek | 3.99e-50 | 1 |
parotid gland primordium | 3.99e-50 | 1 |
left cardiac atrium | 6.58e-50 | 1 |
gland of gut | 4.18e-45 | 10 |
midface | 7.14e-26 | 2 |
cardiac atrium | 9.18e-26 | 2 |
future cardiac atrium | 9.18e-26 | 2 |
oral opening | 3.99e-21 | 22 |
cardiac chamber | 1.12e-17 | 3 |
mouth | 2.82e-16 | 29 |
stomodeum | 2.82e-16 | 29 |
exocrine gland | 2.73e-15 | 31 |
exocrine system | 2.73e-15 | 31 |
orifice | 2.66e-13 | 36 |
subdivision of head | 5.14e-10 | 49 |
head | 7.15e-09 | 56 |
gland | 1.83e-08 | 59 |
anatomical cavity | 3.25e-08 | 61 |
anterior region of body | 4.28e-08 | 62 |
craniocervical region | 4.28e-08 | 62 |
adult organism | 8.86e-08 | 114 |
respiratory system | 6.51e-07 | 74 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.