FFCP PHASE1:Hg19::chr1:27335498..27335503,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009497;8.29e-08;13 | |ontology_enrichment_development_v019=UBERON:0009497;8.29e-08;13 | ||
|ontology_enrichment_disease=DOID:305!3.65e-20!106;DOID:0050687!7.54e-19!143;DOID:162!1.34e-12!235;DOID:14566!6.72e-12!239;DOID:3119!1.43e-07!14 | |ontology_enrichment_disease=DOID:305!3.65e-20!106;DOID:0050687!7.54e-19!143;DOID:162!1.34e-12!235;DOID:14566!6.72e-12!239;DOID:3119!1.43e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:4468;2.69e-22;2!DOID:3371;8.17e-12;1!DOID:4549;8.17e-12;1!DOID:5861;8.17e-12;1!DOID:6496;8.17e-12;1!DOID:7;3.45e-07;39!DOID:299;5.63e-07;25!DOID:3307;9.42e-07;2 | |ontology_enrichment_disease_v019=DOID:4468;2.69e-22;2!DOID:3371;8.17e-12;1!DOID:4549;8.17e-12;1!DOID:5861;8.17e-12;1!DOID:6496;8.17e-12;1!DOID:7;3.45e-07;39!DOID:299;5.63e-07;25!DOID:3307;9.42e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:4468,3.17e-22,2;DOID:3371,6.26e-12,1;DOID:4549,6.26e-12,1;DOID:5861,6.26e-12,1;DOID:6496,6.26e-12,1;DOID:0050687,1.72e-10,143;DOID:7,3.33e-09,39;DOID:305,1.55e-08,106;DOID:299,5.16e-07,25;DOID:3307,8.93e-07,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002134;8.17e-12;1!UBERON:0005208;8.17e-12;1!UBERON:0004145;8.17e-12;1!UBERON:0005946;8.17e-12;1!UBERON:0005965;8.17e-12;1!UBERON:0002078;8.17e-12;1 | |ontology_enrichment_uberon_v019=UBERON:0002134;8.17e-12;1!UBERON:0005208;8.17e-12;1!UBERON:0004145;8.17e-12;1!UBERON:0005946;8.17e-12;1!UBERON:0005965;8.17e-12;1!UBERON:0002078;8.17e-12;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,7.76e-12,1;UBERON:0005208,7.76e-12,1;UBERON:0005946,7.76e-12,1;UBERON:0005965,7.76e-12,1;UBERON:0002078,7.76e-12,1 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07633781413317,0,0,0,0,0.515281080091258,0,0.675105328965065,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0,0.252320850875628,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.626909658919938,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.535286966391485,0.315404830067869,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0.321707842287215,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.510450849978337,0,0,1.25924938732256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0.281695602532241,0.143411352204052,0.294747123039363,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,0.245040215981032,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,1.84296421259539,0,0,0.111308705022906,0,0.211125408127993,0.19924798825107,0,0.755798243562828,0.511343412510774,0,0.311039587661807,1.16828856491525,0.358042349351218,0,0,0,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0,0,1.03423011972439,0.583209226766509,0,0,0.120596438625408,0,0.110579259931225,0.591095237907095,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,2.10998064528027,1.30586246527318,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0.150323419414493,0,0,0,0,0,1.42304773014896,0,0.173559738335131,0,0.435296032902013,0,0,0,0,0.0821154570532092,0.0969890164884194,1.588610280447,0,0,0,0,0.586654148204409,0.0801588202515337,0.213452994739353,0,0.288180834308212,0.114536596165916,0.343189995723929,0,0.124252535565433,0,0,0.313808538937,0,0,0.600420288709789,0,0,0,0,0,0,1.43574604915363,0,0,0,0,0.720599767084807,1.16495949527454,0,0.0824158583811665,0,1.18112977817699,0,0,0,0.482259445395058,0,0.83088067605837,0,0,0,0.670869375198532,0,0,0.528001682597033,0,0.383830394638891,0,0,0.25426853765475,0,0,0,0,0,0,0.113312091520126,0,0,0,0.13223260174269,2.05304205461195,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0.573409195690071,0,0,0.415045904808692,0,0,0,0,0.468334905806882,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0.521745061811734,0,0.380805212168795,0,0,0,0.464033759878494,0,0,0,0,0,0,1.71553273099941,0,0,0,0,0.179088841081487,0,0,0,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0.637724760305049,0,0.558644917973244,0.318004350653419,0.0788617450012534,0,0.352675943690684,0,0,0,0.638535436228605,0,0,0.0691572524642179,0.161475645631851,0,0.196295437002051,0.235939446695481,0,0.115525666150338,0,0,0.397832444232549,0,0,0,0,0.655087670040387,0.147856086217045,0.202612753855184,0,0.413373593002368,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.230467975111559,0.171488009437418,0.0679697329768317,0,1.77290761325952,0.889851215136553,0,0.157115589916002,0.840816489941367,0,0.647782773655864,0.47775168788705,0.0714765441766563,0,0.116241425368125,0,2.40513409419076,0.414432328326074,0.17071847709395,0,0,0,0,0.846774100381858,0,0,0,0.335566295393377,0.098150233615243,1.95068679971631,0,0.102662806856247,0,0,0,0.994753875806841,0,0.11294608203896,0.109940516745429,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0.357107877211315,0.352894871715692,0,1.46067277649303,0,0,0.157771562193185,0.0679914901909147,0.436350690340377,0.5290268405154,0,0,0,0,0.109265571963696,0,0,0.26721740526556,0.0918948995348449,0.250707539292375,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0.26940821205835,0,0,0.0814032686109745,0.640364075266293,0,0.628776414746108,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07633781413317,0,0,0,0,0.515281080091258,0,0.675105328965065,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0,0.252320850875628,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.626909658919938,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.535286966391485,0.315404830067869,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0.321707842287215,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.510450849978337,0,0,1.25924938732256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0.281695602532241,0.143411352204052,0.294747123039363,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,0.245040215981032,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,1.84296421259539,0,0,0.111308705022906,0,0.211125408127993,0.19924798825107,0,0.755798243562828,0.511343412510774,0,0.311039587661807,1.16828856491525,0.358042349351218,0,0,0,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0,0,1.03423011972439,0.583209226766509,0,0,0.120596438625408,0,0.110579259931225,0.591095237907095,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,2.10998064528027,1.30586246527318,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0.150323419414493,0,0,0,0,0,1.42304773014896,0,0.173559738335131,0,0.435296032902013,0,0,0,0,0.0821154570532092,0.0969890164884194,1.588610280447,0,0,0,0,0.586654148204409,0.0801588202515337,0.213452994739353,0,0.288180834308212,0.114536596165916,0.343189995723929,0,0.124252535565433,0,0,0.313808538937,0,0,0.600420288709789,0,0,0,0,0,0,1.43574604915363,0,0,0,0,0.720599767084807,1.16495949527454,0,0.0824158583811665,0,1.18112977817699,0,0,0,0.482259445395058,0,0.83088067605837,0,0,0,0.670869375198532,0,0,0.528001682597033,0,0.383830394638891,0,0,0.25426853765475,0,0,0,0,0,0,0.113312091520126,0,0,0,0.13223260174269,2.05304205461195,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0.573409195690071,0,0,0.415045904808692,0,0,0,0,0.468334905806882,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0.521745061811734,0,0.380805212168795,0,0,0,0.464033759878494,0,0,0,0,0,0,1.71553273099941,0,0,0,0,0.179088841081487,0,0,0,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0.637724760305049,0,0.558644917973244,0.318004350653419,0.0788617450012534,0,0.352675943690684,0,0,0,0.638535436228605,0,0,0.0691572524642179,0.161475645631851,0,0.196295437002051,0.235939446695481,0,0.115525666150338,0,0,0.397832444232549,0,0,0,0,0.655087670040387,0.147856086217045,0.202612753855184,0,0.413373593002368,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.230467975111559,0.171488009437418,0.0679697329768317,0,1.77290761325952,0.889851215136553,0,0.157115589916002,0.840816489941367,0,0.647782773655864,0.47775168788705,0.0714765441766563,0,0.116241425368125,0,2.40513409419076,0.414432328326074,0.17071847709395,0,0,0,0,0.846774100381858,0,0,0,0.335566295393377,0.098150233615243,1.95068679971631,0,0.102662806856247,0,0,0,0.994753875806841,0,0.11294608203896,0.109940516745429,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0.357107877211315,0.352894871715692,0,1.46067277649303,0,0,0.157771562193185,0.0679914901909147,0.436350690340377,0.5290268405154,0,0,0,0,0.109265571963696,0,0,0.26721740526556,0.0918948995348449,0.250707539292375,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0.26940821205835,0,0,0.0814032686109745,0.640364075266293,0,0.628776414746108,0,0,0,0,0,0 | ||
|short_description=p@chr1:27335498..27335503,+ | |short_description=p@chr1:27335498..27335503,+ | ||
}} | }} |
Revision as of 00:40, 19 November 2012
Short description: | p@chr1:27335498..27335503, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:27335498..27335503, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 7.76e-12 | 1 |
right atrium valve | 7.76e-12 | 1 |
outflow tract of atrium | 7.76e-12 | 1 |
outflow part of right atrium | 7.76e-12 | 1 |
right cardiac atrium | 7.76e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 3.17e-22 | 2 |
chondrosarcoma | 6.26e-12 | 1 |
extraosseous chondrosarcoma | 6.26e-12 | 1 |
myxoid chondrosarcoma | 6.26e-12 | 1 |
extraskeletal myxoid chondrosarcoma | 6.26e-12 | 1 |
cell type cancer | 1.72e-10 | 143 |
disease of anatomical entity | 3.33e-09 | 39 |
carcinoma | 1.55e-08 | 106 |
adenocarcinoma | 5.16e-07 | 25 |
teratoma | 8.93e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.