FFCP PHASE1:Hg19::chr4:157892921..157892990,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!1.72e-17!180;CL:0000057!2.14e-11!75;CL:0002371!1.18e-08!591;CL:0000680!6.00e-08!57;CL:0000056!6.00e-08!57;CL:0000355!6.00e-08!57;CL:0000144!8.87e-08!625;CL:0000187!5.66e-07!54 | |ontology_enrichment_celltype=CL:0000055!1.72e-17!180;CL:0000057!2.14e-11!75;CL:0002371!1.18e-08!591;CL:0000680!6.00e-08!57;CL:0000056!6.00e-08!57;CL:0000355!6.00e-08!57;CL:0000144!8.87e-08!625;CL:0000187!5.66e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0000134;3.34e-08;55!CL:0000048;5.02e-08;58!CL:0000723;5.91e-08;61 | |ontology_enrichment_celltype_v019=CL:0000134;3.34e-08;55!CL:0000048;5.02e-08;58!CL:0000723;5.91e-08;61 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.68e-12,76;CL:0000680,2.56e-08,58;CL:0000056,2.56e-08,58;CL:0000355,2.56e-08,58;CL:0000187,2.51e-07,55 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!4.86e-09!14 | |ontology_enrichment_disease=DOID:2394!4.86e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;4.56e-09;14 | |ontology_enrichment_disease_v019=DOID:2394;4.56e-09;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,4.63e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0005256!4.66e-15!143;UBERON:0000468!9.78e-13!659;UBERON:0000467!1.84e-12!625;UBERON:0000480!3.85e-12!626;UBERON:0000926!6.97e-11!448;UBERON:0004120!6.97e-11!448;UBERON:0006603!6.97e-11!448;UBERON:0002100!1.11e-10!216;UBERON:0000475!1.50e-10!365;UBERON:0000062!5.50e-10!511;UBERON:0000914!1.06e-09!83;UBERON:0002329!1.06e-09!83;UBERON:0003077!1.06e-09!83;UBERON:0003059!1.06e-09!83;UBERON:0007282!1.06e-09!83;UBERON:0009618!1.06e-09!83;UBERON:0007285!1.06e-09!83;UBERON:0004290!1.14e-08!70;UBERON:0002050!1.21e-08!605;UBERON:0005423!1.21e-08!605;UBERON:0000479!1.69e-08!787;UBERON:0000923!2.09e-08!604;UBERON:0005291!2.09e-08!604;UBERON:0006598!2.09e-08!604;UBERON:0002532!2.09e-08!604;UBERON:0002204!2.61e-08!167;UBERON:0003104!3.27e-08!238;UBERON:0009142!3.27e-08!238;UBERON:0002385!4.23e-08!63;UBERON:0001015!4.23e-08!63;UBERON:0000383!4.23e-08!63;UBERON:0000922!5.86e-08!612;UBERON:0001134!6.06e-08!61;UBERON:0002036!6.06e-08!61;UBERON:0003082!6.06e-08!61;UBERON:0000486!1.20e-07!82;UBERON:0000481!1.29e-07!347;UBERON:0003102!1.53e-07!95;UBERON:0001444!8.39e-07!48;UBERON:0007625!8.91e-07!11 | |ontology_enrichment_uberon=UBERON:0005256!4.66e-15!143;UBERON:0000468!9.78e-13!659;UBERON:0000467!1.84e-12!625;UBERON:0000480!3.85e-12!626;UBERON:0000926!6.97e-11!448;UBERON:0004120!6.97e-11!448;UBERON:0006603!6.97e-11!448;UBERON:0002100!1.11e-10!216;UBERON:0000475!1.50e-10!365;UBERON:0000062!5.50e-10!511;UBERON:0000914!1.06e-09!83;UBERON:0002329!1.06e-09!83;UBERON:0003077!1.06e-09!83;UBERON:0003059!1.06e-09!83;UBERON:0007282!1.06e-09!83;UBERON:0009618!1.06e-09!83;UBERON:0007285!1.06e-09!83;UBERON:0004290!1.14e-08!70;UBERON:0002050!1.21e-08!605;UBERON:0005423!1.21e-08!605;UBERON:0000479!1.69e-08!787;UBERON:0000923!2.09e-08!604;UBERON:0005291!2.09e-08!604;UBERON:0006598!2.09e-08!604;UBERON:0002532!2.09e-08!604;UBERON:0002204!2.61e-08!167;UBERON:0003104!3.27e-08!238;UBERON:0009142!3.27e-08!238;UBERON:0002385!4.23e-08!63;UBERON:0001015!4.23e-08!63;UBERON:0000383!4.23e-08!63;UBERON:0000922!5.86e-08!612;UBERON:0001134!6.06e-08!61;UBERON:0002036!6.06e-08!61;UBERON:0003082!6.06e-08!61;UBERON:0000486!1.20e-07!82;UBERON:0000481!1.29e-07!347;UBERON:0003102!1.53e-07!95;UBERON:0001444!8.39e-07!48;UBERON:0007625!8.91e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0007625;8.16e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0007625;8.16e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,5.73e-14,160;UBERON:0009142,5.73e-14,160;UBERON:0005256,1.59e-11,122;UBERON:0002204,8.24e-10,167;UBERON:0002100,8.59e-10,199;UBERON:0000479,1.90e-09,773;UBERON:0002329,4.91e-09,71;UBERON:0003059,4.91e-09,71;UBERON:0007282,4.91e-09,71;UBERON:0004290,4.91e-09,71;UBERON:0009618,4.91e-09,71;UBERON:0003077,7.95e-09,72;UBERON:0007285,7.95e-09,72;UBERON:0007503,9.86e-09,78;UBERON:0007524,9.87e-09,73;UBERON:0002385,1.84e-08,64;UBERON:0001015,1.84e-08,64;UBERON:0000383,1.84e-08,64;UBERON:0001134,2.63e-08,62;UBERON:0002036,2.63e-08,62;UBERON:0003082,2.63e-08,62;UBERON:0000486,5.37e-08,83;UBERON:0000926,6.19e-08,315;UBERON:0004120,6.19e-08,315;UBERON:0006603,6.19e-08,315;UBERON:0005423,2.49e-07,581;UBERON:0003102,5.56e-07,99;UBERON:0007625,8.61e-07,11 | |||
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| ||
|short_description=p1@PDGFC | |short_description=p1@PDGFC | ||
}} | }} |
Revision as of 05:10, 19 November 2012
Short description: | p1@PDGFC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PDGFC_5end |
Coexpression cluster: | NA |
Association with transcript: | -375bp_to_ENST00000502773, ENST00000543489, NM_016205, NR_036641, uc003iph.1, uc003ipi.1, uc011cis.1_5end |
EntrezGene: | PDGFC |
HGNC: | 8801 |
UniProt: | Q9NRA1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.68e-12 | 76 |
muscle precursor cell | 2.56e-08 | 58 |
myoblast | 2.56e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.56e-08 | 58 |
muscle cell | 2.51e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 5.73e-14 | 160 |
entire embryonic mesenchyme | 5.73e-14 | 160 |
trunk mesenchyme | 1.59e-11 | 122 |
musculoskeletal system | 8.24e-10 | 167 |
trunk | 8.59e-10 | 199 |
tissue | 1.90e-09 | 773 |
somite | 4.91e-09 | 71 |
presomitic mesoderm | 4.91e-09 | 71 |
presumptive segmental plate | 4.91e-09 | 71 |
dermomyotome | 4.91e-09 | 71 |
trunk paraxial mesoderm | 4.91e-09 | 71 |
paraxial mesoderm | 7.95e-09 | 72 |
presumptive paraxial mesoderm | 7.95e-09 | 72 |
epithelial vesicle | 9.86e-09 | 78 |
dense mesenchyme tissue | 9.87e-09 | 73 |
muscle tissue | 1.84e-08 | 64 |
musculature | 1.84e-08 | 64 |
musculature of body | 1.84e-08 | 64 |
skeletal muscle tissue | 2.63e-08 | 62 |
striated muscle tissue | 2.63e-08 | 62 |
myotome | 2.63e-08 | 62 |
multilaminar epithelium | 5.37e-08 | 83 |
mesoderm | 6.19e-08 | 315 |
mesoderm-derived structure | 6.19e-08 | 315 |
presumptive mesoderm | 6.19e-08 | 315 |
developing anatomical structure | 2.49e-07 | 581 |
surface structure | 5.56e-07 | 99 |
pigment epithelium of eye | 8.61e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.63e-09 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.