FFCP PHASE1:Hg19::chr1:162602328..162602360,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!1.06e-30!180;CL:0000057!2.65e-19!75;CL:0000136!8.67e-11!15;CL:0000680!6.97e-10!57;CL:0000056!6.97e-10!57;CL:0000355!6.97e-10!57;CL:0002620!1.32e-09!23;CL:0000187!3.18e-09!54;CL:0000393!4.14e-07!60;CL:0000211!4.14e-07!60;CL:0000183!4.17e-07!59 | |ontology_enrichment_celltype=CL:0000055!1.06e-30!180;CL:0000057!2.65e-19!75;CL:0000136!8.67e-11!15;CL:0000680!6.97e-10!57;CL:0000056!6.97e-10!57;CL:0000355!6.97e-10!57;CL:0002620!1.32e-09!23;CL:0000187!3.18e-09!54;CL:0000393!4.14e-07!60;CL:0000211!4.14e-07!60;CL:0000183!4.17e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000136;8.32e-11;13!CL:0002620;1.87e-10;23!CL:0000057;2.56e-07;73!CL:0000153;4.54e-07;9!CL:0000447;4.54e-07;9!CL:0000499;5.35e-07;28 | |ontology_enrichment_celltype_v019=CL:0000136;8.32e-11;13!CL:0002620;1.87e-10;23!CL:0000057;2.56e-07;73!CL:0000153;4.54e-07;9!CL:0000447;4.54e-07;9!CL:0000499;5.35e-07;28 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.87e-18,76;CL:0000136,3.14e-12,15;CL:0002620,1.71e-10,23;CL:0000680,3.19e-08,58;CL:0000056,3.19e-08,58;CL:0000355,3.19e-08,58;CL:0000187,1.59e-07,55;CL:0000153,4.77e-07,9;CL:0000447,4.77e-07,9;CL:0000499,6.66e-07,28 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!6.96e-14!83;UBERON:0002329!6.96e-14!83;UBERON:0003077!6.96e-14!83;UBERON:0003059!6.96e-14!83;UBERON:0007282!6.96e-14!83;UBERON:0009618!6.96e-14!83;UBERON:0007285!6.96e-14!83;UBERON:0004290!1.76e-12!70;UBERON:0000475!1.99e-12!365;UBERON:0002385!2.90e-11!63;UBERON:0001015!2.90e-11!63;UBERON:0000383!2.90e-11!63;UBERON:0001134!9.10e-11!61;UBERON:0002036!9.10e-11!61;UBERON:0003082!9.10e-11!61;UBERON:0000486!1.35e-09!82;UBERON:0007023!1.96e-09!115;UBERON:0002199!4.85e-09!45;UBERON:0002416!4.85e-09!45;UBERON:0003102!8.36e-09!95;UBERON:0001013!6.80e-08!14;UBERON:0002097!1.38e-07!40 | |ontology_enrichment_uberon=UBERON:0000914!6.96e-14!83;UBERON:0002329!6.96e-14!83;UBERON:0003077!6.96e-14!83;UBERON:0003059!6.96e-14!83;UBERON:0007282!6.96e-14!83;UBERON:0009618!6.96e-14!83;UBERON:0007285!6.96e-14!83;UBERON:0004290!1.76e-12!70;UBERON:0000475!1.99e-12!365;UBERON:0002385!2.90e-11!63;UBERON:0001015!2.90e-11!63;UBERON:0000383!2.90e-11!63;UBERON:0001134!9.10e-11!61;UBERON:0002036!9.10e-11!61;UBERON:0003082!9.10e-11!61;UBERON:0000486!1.35e-09!82;UBERON:0007023!1.96e-09!115;UBERON:0002199!4.85e-09!45;UBERON:0002416!4.85e-09!45;UBERON:0003102!8.36e-09!95;UBERON:0001013!6.80e-08!14;UBERON:0002097!1.38e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;5.56e-09;14!UBERON:0002385;2.76e-08;31!UBERON:0001015;2.76e-08;31!UBERON:0000383;2.76e-08;31!UBERON:0002384;5.19e-08;198!UBERON:0004457;3.47e-07;9!UBERON:0000042;3.47e-07;9!UBERON:0002199;4.40e-07;46!UBERON:0002416;4.40e-07;46!UBERON:0002097;6.09e-07;41 | |ontology_enrichment_uberon_v019=UBERON:0001013;5.56e-09;14!UBERON:0002385;2.76e-08;31!UBERON:0001015;2.76e-08;31!UBERON:0000383;2.76e-08;31!UBERON:0002384;5.19e-08;198!UBERON:0004457;3.47e-07;9!UBERON:0000042;3.47e-07;9!UBERON:0002199;4.40e-07;46!UBERON:0002416;4.40e-07;46!UBERON:0002097;6.09e-07;41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,7.13e-11,73;UBERON:0002329,9.77e-11,71;UBERON:0003059,9.77e-11,71;UBERON:0007282,9.77e-11,71;UBERON:0004290,9.77e-11,71;UBERON:0009618,9.77e-11,71;UBERON:0002199,1.71e-10,46;UBERON:0002416,1.71e-10,46;UBERON:0003077,2.32e-10,72;UBERON:0007285,2.32e-10,72;UBERON:0002385,1.07e-09,64;UBERON:0001015,1.07e-09,64;UBERON:0000383,1.07e-09,64;UBERON:0001134,3.61e-09,62;UBERON:0002036,3.61e-09,62;UBERON:0003082,3.61e-09,62;UBERON:0001013,6.93e-09,14;UBERON:0000486,8.17e-09,83;UBERON:0002097,8.23e-09,41;UBERON:0003102,1.39e-08,99;UBERON:0007503,2.30e-08,78 | |||
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| ||
|short_description=p3@DDR2 | |short_description=p3@DDR2 | ||
}} | }} |
Revision as of 19:51, 19 November 2012
Short description: | p3@DDR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_DDR2_5end |
Coexpression cluster: | C3895_mature_Preadipocyte_extraskeletal_Fibroblast_adipose_Adipocyte_Olfactory |
Association with transcript: | 68bp_to_ENST00000367921_5end |
EntrezGene: | DDR2 |
HGNC: | 2731 |
UniProt: | Q16832 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.87e-18 | 76 |
fat cell | 3.14e-12 | 15 |
skin fibroblast | 1.71e-10 | 23 |
muscle precursor cell | 3.19e-08 | 58 |
myoblast | 3.19e-08 | 58 |
multi-potent skeletal muscle stem cell | 3.19e-08 | 58 |
muscle cell | 1.59e-07 | 55 |
GAG secreting cell | 4.77e-07 | 9 |
carbohydrate secreting cell | 4.77e-07 | 9 |
stromal cell | 6.66e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 7.13e-11 | 73 |
somite | 9.77e-11 | 71 |
presomitic mesoderm | 9.77e-11 | 71 |
presumptive segmental plate | 9.77e-11 | 71 |
dermomyotome | 9.77e-11 | 71 |
trunk paraxial mesoderm | 9.77e-11 | 71 |
integument | 1.71e-10 | 46 |
integumental system | 1.71e-10 | 46 |
paraxial mesoderm | 2.32e-10 | 72 |
presumptive paraxial mesoderm | 2.32e-10 | 72 |
muscle tissue | 1.07e-09 | 64 |
musculature | 1.07e-09 | 64 |
musculature of body | 1.07e-09 | 64 |
skeletal muscle tissue | 3.61e-09 | 62 |
striated muscle tissue | 3.61e-09 | 62 |
myotome | 3.61e-09 | 62 |
adipose tissue | 6.93e-09 | 14 |
multilaminar epithelium | 8.17e-09 | 83 |
skin of body | 8.23e-09 | 41 |
surface structure | 1.39e-08 | 99 |
epithelial vesicle | 2.30e-08 | 78 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.