FFCP PHASE1:Hg19::chr5:58596910..58596914,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0002150!1.15e-18!3;CL:0000861!1.15e-18!3;CL:0000066!6.15e-07!254 | |ontology_enrichment_celltype=CL:0002150!1.15e-18!3;CL:0000861!1.15e-18!3;CL:0000066!6.15e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:1000415;4.56e-07;2 | |ontology_enrichment_celltype_v019=CL:1000415;4.56e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.61e-08,253;CL:1000415,4.56e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.07e-36;29 | |ontology_enrichment_development_v019=UBERON:0008947;1.07e-36;29 | ||
|ontology_enrichment_disease=DOID:305!1.96e-23!106;DOID:0050687!1.65e-19!143;DOID:162!4.17e-13!235;DOID:14566!1.03e-12!239;DOID:178!5.37e-07!1;DOID:326!5.37e-07!1;DOID:3978!5.37e-07!1;DOID:3394!5.37e-07!1;DOID:5844!5.37e-07!1 | |ontology_enrichment_disease=DOID:305!1.96e-23!106;DOID:0050687!1.65e-19!143;DOID:162!4.17e-13!235;DOID:14566!1.03e-12!239;DOID:178!5.37e-07!1;DOID:326!5.37e-07!1;DOID:3978!5.37e-07!1;DOID:3394!5.37e-07!1;DOID:5844!5.37e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:178;4.55e-12;1!DOID:326;4.55e-12;1!DOID:3978;4.55e-12;1!DOID:3394;4.55e-12;1!DOID:5844;4.55e-12;1!DOID:305;4.57e-07;106 | |ontology_enrichment_disease_v019=DOID:178;4.55e-12;1!DOID:326;4.55e-12;1!DOID:3978;4.55e-12;1!DOID:3394;4.55e-12;1!DOID:5844;4.55e-12;1!DOID:305;4.57e-07;106 | ||
|ontology_enrichment_disease_v019_2=DOID:305,1.48e-21,106;DOID:0050687,1.88e-15,143;DOID:178,4.31e-12,1;DOID:326,4.31e-12,1;DOID:3978,4.31e-12,1;DOID:3394,4.31e-12,1;DOID:5844,4.31e-12,1;DOID:162,2.13e-11,235;DOID:14566,4.10e-11,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.80e-51!9;UBERON:0001557!2.20e-23!19;UBERON:0008947!2.90e-16!38;UBERON:0003258!2.90e-16!38;UBERON:0000072!4.59e-13!46;UBERON:0000065!4.65e-11!53;UBERON:0000077!8.10e-08!130;UBERON:0001004!1.35e-07!72;UBERON:0000063!2.37e-07!97 | |ontology_enrichment_uberon=UBERON:0001737!4.80e-51!9;UBERON:0001557!2.20e-23!19;UBERON:0008947!2.90e-16!38;UBERON:0003258!2.90e-16!38;UBERON:0000072!4.59e-13!46;UBERON:0000065!4.65e-11!53;UBERON:0000077!8.10e-08!130;UBERON:0001004!1.35e-07!72;UBERON:0000063!2.37e-07!97 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.22e-98;9!UBERON:0001557;5.22e-98;9!UBERON:0000072;3.29e-26;37!UBERON:0000065;6.77e-23;44!UBERON:0001004;1.36e-10;65 | |ontology_enrichment_uberon_v019=UBERON:0001737;5.22e-98;9!UBERON:0001557;5.22e-98;9!UBERON:0000072;3.29e-26;37!UBERON:0000065;6.77e-23;44!UBERON:0001004;1.36e-10;65 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.85e-98,9;UBERON:0001557,5.77e-46,19;UBERON:0008947,1.02e-27,38;UBERON:0003258,1.02e-27,38;UBERON:0000072,3.56e-22,47;UBERON:0000065,3.87e-19,54;UBERON:0001004,1.29e-13,74;UBERON:0001041,2.20e-11,87;UBERON:0004921,1.06e-09,118;UBERON:0001007,3.18e-09,145;UBERON:0001555,3.18e-09,145;UBERON:0007026,3.18e-09,145;UBERON:0004119,3.35e-08,160;UBERON:0000925,3.35e-08,160;UBERON:0006595,3.35e-08,160;UBERON:0001048,7.44e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.4023152065344,16.8584690078102,19.0398713607951,17.647035637183,16.9945966392077,20.4052732435543,11.460661193614,11.1846235121447,21.5458407889979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511359764496605,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54581522651905,0,0,0,0,0,0,0,0,0,11.7653540600509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.8647159511798,31.9400315666631,34.9811847046671,0,0,0,0,0,0,92.300252650827,0,0,0,0,0.114536596165916,0,0.14405479798815,0,2.12124631155116,0,0,0,0,0,0,0,0,0,0,0,0,2.99518500748487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,10.0897978792964,0,0,0,0,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0.551369397209069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.4023152065344,16.8584690078102,19.0398713607951,17.647035637183,16.9945966392077,20.4052732435543,11.460661193614,11.1846235121447,21.5458407889979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511359764496605,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54581522651905,0,0,0,0,0,0,0,0,0,11.7653540600509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.8647159511798,31.9400315666631,34.9811847046671,0,0,0,0,0,0,92.300252650827,0,0,0,0,0.114536596165916,0,0.14405479798815,0,2.12124631155116,0,0,0,0,0,0,0,0,0,0,0,0,2.99518500748487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,10.0897978792964,0,0,0,0,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0.551369397209069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:58596910..58596914,- | |short_description=p@chr5:58596910..58596914,- | ||
}} | }} |
Revision as of 02:11, 20 November 2012
Short description: | p@chr5:58596910..58596914, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:58596910..58596914, - |
Coexpression cluster: | C980_gall_epitheloid_merkel_Hep2_cervical_bronchogenic_leiomyoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.61e-08 | 253 |
epithelial cell of gall bladder | 4.56e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.85e-98 | 9 |
upper respiratory tract | 5.77e-46 | 19 |
respiratory primordium | 1.02e-27 | 38 |
endoderm of foregut | 1.02e-27 | 38 |
segment of respiratory tract | 3.56e-22 | 47 |
respiratory tract | 3.87e-19 | 54 |
respiratory system | 1.29e-13 | 74 |
foregut | 2.20e-11 | 87 |
subdivision of digestive tract | 1.06e-09 | 118 |
digestive system | 3.18e-09 | 145 |
digestive tract | 3.18e-09 | 145 |
primitive gut | 3.18e-09 | 145 |
endoderm-derived structure | 3.35e-08 | 160 |
endoderm | 3.35e-08 | 160 |
presumptive endoderm | 3.35e-08 | 160 |
primordium | 7.44e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.48e-21 | 106 |
cell type cancer | 1.88e-15 | 143 |
vascular disease | 4.31e-12 | 1 |
ischemia | 4.31e-12 | 1 |
extrinsic cardiomyopathy | 4.31e-12 | 1 |
myocardial ischemia | 4.31e-12 | 1 |
myocardial infarction | 4.31e-12 | 1 |
cancer | 2.13e-11 | 235 |
disease of cellular proliferation | 4.10e-11 | 239 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.