FFCP PHASE1:Hg19::chr2:136594740..136594760,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002563!1.16e-12!4;CL:0002253!4.17e-07!2 | |ontology_enrichment_celltype=CL:0002563!1.16e-12!4;CL:0002253!4.17e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002231;3.25e-07;3 | |ontology_enrichment_celltype_v019=CL:0002231;3.25e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002231,3.16e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.91e-19;1 | |ontology_enrichment_development_v019=UBERON:0000358;3.91e-19;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.80e-20!35;UBERON:0000160!3.25e-20!27;UBERON:0007029!6.82e-13!1;UBERON:0002363!7.68e-13!1;UBERON:0007647!7.68e-13!1;UBERON:0010115!7.68e-13!1;UBERON:0001242!1.16e-12!4;UBERON:0001262!1.16e-12!4;UBERON:0004786!1.16e-12!4;UBERON:0004808!1.16e-12!4;UBERON:0001277!1.16e-12!4;UBERON:0001155!1.84e-12!9;UBERON:0003350!2.59e-10!5;UBERON:0000059!2.68e-10!11;UBERON:0004921!7.98e-08!129;UBERON:0004185!7.98e-08!129;UBERON:0002108!8.66e-08!14;UBERON:0002360!4.69e-07!2;UBERON:0000094!4.69e-07!2;UBERON:0007645!4.69e-07!2 | |ontology_enrichment_uberon=UBERON:0005409!2.80e-20!35;UBERON:0000160!3.25e-20!27;UBERON:0007029!6.82e-13!1;UBERON:0002363!7.68e-13!1;UBERON:0007647!7.68e-13!1;UBERON:0010115!7.68e-13!1;UBERON:0001242!1.16e-12!4;UBERON:0001262!1.16e-12!4;UBERON:0004786!1.16e-12!4;UBERON:0004808!1.16e-12!4;UBERON:0001277!1.16e-12!4;UBERON:0001155!1.84e-12!9;UBERON:0003350!2.59e-10!5;UBERON:0000059!2.68e-10!11;UBERON:0004921!7.98e-08!129;UBERON:0004185!7.98e-08!129;UBERON:0002108!8.66e-08!14;UBERON:0002360!4.69e-07!2;UBERON:0000094!4.69e-07!2;UBERON:0007645!4.69e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;3.64e-38;22!UBERON:0000160;4.59e-36;17!UBERON:0002108;2.23e-33;4!UBERON:0004921;2.22e-23;33!UBERON:0000922;1.02e-11;49!UBERON:0001555;4.03e-10;54!UBERON:0001155;4.61e-09;9!UBERON:0000059;1.42e-07;11!UBERON:0001007;1.74e-07;81!UBERON:0002114;2.19e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0005409;3.64e-38;22!UBERON:0000160;4.59e-36;17!UBERON:0002108;2.23e-33;4!UBERON:0004921;2.22e-23;33!UBERON:0000922;1.02e-11;49!UBERON:0001555;4.03e-10;54!UBERON:0001155;4.61e-09;9!UBERON:0000059;1.42e-07;11!UBERON:0001007;1.74e-07;81!UBERON:0002114;2.19e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.60e-36,17;UBERON:0005409,9.44e-34,25;UBERON:0002108,2.23e-33,4;UBERON:0004921,1.03e-11,118;UBERON:0001007,1.97e-09,145;UBERON:0001555,1.97e-09,145;UBERON:0007026,1.97e-09,145;UBERON:0001155,4.61e-09,9;UBERON:0004119,1.73e-08,160;UBERON:0000925,1.73e-08,160;UBERON:0006595,1.73e-08,160;UBERON:0000059,1.42e-07,11;UBERON:0002114,2.19e-07,2;UBERON:0011216,2.80e-07,223 | |||
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|short_description=p1@LCT | |short_description=p1@LCT | ||
}} | }} |
Revision as of 06:42, 20 November 2012
Short description: | p1@LCT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LCT_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_ENST00000264162, NM_002299, uc002tuu.1_5end |
EntrezGene: | LCT |
HGNC: | 6530 |
UniProt: | P09848 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.60e-36 | 17 |
gastrointestinal system | 9.44e-34 | 25 |
small intestine | 2.23e-33 | 4 |
subdivision of digestive tract | 1.03e-11 | 118 |
digestive system | 1.97e-09 | 145 |
digestive tract | 1.97e-09 | 145 |
primitive gut | 1.97e-09 | 145 |
colon | 4.61e-09 | 9 |
endoderm-derived structure | 1.73e-08 | 160 |
endoderm | 1.73e-08 | 160 |
presumptive endoderm | 1.73e-08 | 160 |
large intestine | 1.42e-07 | 11 |
duodenum | 2.19e-07 | 2 |
organ system subdivision | 2.80e-07 | 223 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.