FFCP PHASE1:Hg19::chrX:107681555..107681566,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002076!1.54e-15!43;CL:0000223!3.97e-11!59;CL:0002251!2.53e-10!21;CL:0002368!4.12e-09!13;CL:0000622!6.18e-09!5;CL:0000244!9.42e-08!4;CL:0000731!9.42e-08!4;CL:0000154!2.56e-07!6;CL:0000066!2.83e-07!254 | |ontology_enrichment_celltype=CL:0002076!1.54e-15!43;CL:0000223!3.97e-11!59;CL:0002251!2.53e-10!21;CL:0002368!4.12e-09!13;CL:0000622!6.18e-09!5;CL:0000244!9.42e-08!4;CL:0000731!9.42e-08!4;CL:0000154!2.56e-07!6;CL:0000066!2.83e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000244;1.40e-20;4!CL:0000731;1.40e-20;4!CL:0002076;5.50e-20;42!CL:0002251;2.10e-18;20!CL:0000622;3.14e-16;5!CL:0002623;6.65e-16;3!CL:0002368;7.61e-14;13!CL:0000154;1.51e-13;6!CL:0002195;4.51e-11;2!CL:0002571;4.51e-11;2!CL:0000150;4.61e-09;9!CL:0000307;9.18e-08;3 | |ontology_enrichment_celltype_v019=CL:0000244;1.40e-20;4!CL:0000731;1.40e-20;4!CL:0002076;5.50e-20;42!CL:0002251;2.10e-18;20!CL:0000622;3.14e-16;5!CL:0002623;6.65e-16;3!CL:0002368;7.61e-14;13!CL:0000154;1.51e-13;6!CL:0002195;4.51e-11;2!CL:0002571;4.51e-11;2!CL:0000150;4.61e-09;9!CL:0000307;9.18e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,9.96e-27,42;CL:0000244,1.44e-20,4;CL:0000731,1.44e-20,4;CL:0002251,2.00e-18,20;CL:0000223,2.33e-18,58;CL:0000622,1.88e-16,5;CL:0002623,5.45e-16,3;CL:0002368,9.24e-14,13;CL:0000154,9.88e-14,6;CL:0002195,4.30e-11,2;CL:0002571,4.30e-11,2;CL:0000150,3.50e-09,9;CL:0000068,1.10e-07,3;CL:0000069,1.10e-07,3;CL:0000307,1.10e-07,3;CL:0000377,1.10e-07,3;CL:0000066,1.89e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000223;1.49e-09;58!CL:0000377;9.18e-08;3 | |ontology_enrichment_development_v019=CL:0000223;1.49e-09;58!CL:0000377;9.18e-08;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;6.78e-08;3!DOID:127;6.78e-08;3 | |ontology_enrichment_disease_v019=DOID:0060084;6.78e-08;3!DOID:127;6.78e-08;3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,6.45e-08,3;DOID:127,6.45e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.23e-12!169;UBERON:0000925!2.23e-12!169;UBERON:0006595!2.23e-12!169;UBERON:0000161!4.29e-10!35;UBERON:0000162!6.09e-09!14;UBERON:0001353!6.09e-09!14;UBERON:0000163!6.09e-09!14;UBERON:0006866!6.09e-09!14;UBERON:0000164!6.09e-09!14;UBERON:0000931!6.09e-09!14;UBERON:0000365!8.09e-09!5;UBERON:0004122!3.46e-08!15;UBERON:0001007!4.68e-08!155;UBERON:0001555!4.68e-08!155;UBERON:0007026!4.68e-08!155;UBERON:0005156!8.70e-08!59;UBERON:0000990!8.70e-08!59;UBERON:0002530!1.02e-07!59;UBERON:0001008!2.81e-07!45;UBERON:0005910!3.19e-07!6;UBERON:0003101!3.42e-07!22;UBERON:0000079!3.42e-07!22;UBERON:0001046!3.80e-07!19;UBERON:0000922!4.05e-07!612;UBERON:0003937!8.11e-07!12;UBERON:0005399!8.11e-07!12 | |ontology_enrichment_uberon=UBERON:0004119!2.23e-12!169;UBERON:0000925!2.23e-12!169;UBERON:0006595!2.23e-12!169;UBERON:0000161!4.29e-10!35;UBERON:0000162!6.09e-09!14;UBERON:0001353!6.09e-09!14;UBERON:0000163!6.09e-09!14;UBERON:0006866!6.09e-09!14;UBERON:0000164!6.09e-09!14;UBERON:0000931!6.09e-09!14;UBERON:0000365!8.09e-09!5;UBERON:0004122!3.46e-08!15;UBERON:0001007!4.68e-08!155;UBERON:0001555!4.68e-08!155;UBERON:0007026!4.68e-08!155;UBERON:0005156!8.70e-08!59;UBERON:0000990!8.70e-08!59;UBERON:0002530!1.02e-07!59;UBERON:0001008!2.81e-07!45;UBERON:0005910!3.19e-07!6;UBERON:0003101!3.42e-07!22;UBERON:0000079!3.42e-07!22;UBERON:0001046!3.80e-07!19;UBERON:0000922!4.05e-07!612;UBERON:0003937!8.11e-07!12;UBERON:0005399!8.11e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.70e-16;5!UBERON:0005910;9.08e-14;6!UBERON:0003343;1.81e-11;4!UBERON:0004785;1.81e-11;4!UBERON:0000161;7.67e-09;19!UBERON:0000166;7.67e-09;19!UBERON:0001044;3.51e-08;6!UBERON:0003293;3.51e-08;6!UBERON:0003294;3.51e-08;6!UBERON:0010047;3.51e-08;6!UBERON:0003408;3.51e-08;6!UBERON:0000167;3.51e-08;6!UBERON:0000974;8.45e-08;6!UBERON:0000165;1.01e-07;28!UBERON:0006947;3.03e-07;3!UBERON:0004054;3.03e-07;3!UBERON:0000486;6.48e-07;12!UBERON:0002365;7.53e-07;31!UBERON:0002330;7.53e-07;31 | |ontology_enrichment_uberon_v019=UBERON:0000365;1.70e-16;5!UBERON:0005910;9.08e-14;6!UBERON:0003343;1.81e-11;4!UBERON:0004785;1.81e-11;4!UBERON:0000161;7.67e-09;19!UBERON:0000166;7.67e-09;19!UBERON:0001044;3.51e-08;6!UBERON:0003293;3.51e-08;6!UBERON:0003294;3.51e-08;6!UBERON:0010047;3.51e-08;6!UBERON:0003408;3.51e-08;6!UBERON:0000167;3.51e-08;6!UBERON:0000974;8.45e-08;6!UBERON:0000165;1.01e-07;28!UBERON:0006947;3.03e-07;3!UBERON:0004054;3.03e-07;3!UBERON:0000486;6.48e-07;12!UBERON:0002365;7.53e-07;31!UBERON:0002330;7.53e-07;31 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.57e-16,160;UBERON:0000925,1.57e-16,160;UBERON:0006595,1.57e-16,160;UBERON:0000365,1.74e-16,5;UBERON:0005910,9.25e-14,6;UBERON:0003343,1.65e-11,4;UBERON:0004785,1.65e-11,4;UBERON:0000161,1.59e-09,36;UBERON:0001004,9.74e-09,74;UBERON:0001044,3.19e-08,6;UBERON:0003293,3.19e-08,6;UBERON:0003294,3.19e-08,6;UBERON:0010047,3.19e-08,6;UBERON:0000167,3.19e-08,6;UBERON:0001007,6.84e-08,145;UBERON:0001555,6.84e-08,145;UBERON:0007026,6.84e-08,145;UBERON:0002530,7.07e-08,59;UBERON:0000166,1.38e-07,22;UBERON:0000165,2.04e-07,29;UBERON:0000930,2.04e-07,29;UBERON:0006947,3.92e-07,3;UBERON:0004054,3.92e-07,3;UBERON:0002365,5.17e-07,31;UBERON:0002330,5.17e-07,31 | |||
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| ||
|short_description=p5@COL4A6 | |short_description=p5@COL4A6 | ||
}} | }} |
Revision as of 02:12, 21 November 2012
Short description: | p5@COL4A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_COL4A6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000538570, ENST00000545689_5end |
EntrezGene: | COL4A6 |
HGNC: | 2208 |
UniProt: | F5H3Q5F5H851 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 9.96e-27 | 42 |
transitional epithelial cell | 1.44e-20 | 4 |
urothelial cell | 1.44e-20 | 4 |
epithelial cell of alimentary canal | 2.00e-18 | 20 |
endodermal cell | 2.33e-18 | 58 |
acinar cell | 1.88e-16 | 5 |
acinar cell of salivary gland | 5.45e-16 | 3 |
respiratory epithelial cell | 9.24e-14 | 13 |
protein secreting cell | 9.88e-14 | 6 |
hepatic stem cell | 4.30e-11 | 2 |
hepatic mesenchymal stem cell | 4.30e-11 | 2 |
glandular epithelial cell | 3.50e-09 | 9 |
duct epithelial cell | 1.10e-07 | 3 |
branched duct epithelial cell | 1.10e-07 | 3 |
tracheal epithelial cell | 1.10e-07 | 3 |
tracheoblast | 1.10e-07 | 3 |
epithelial cell | 1.89e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.57e-16 | 160 |
endoderm | 1.57e-16 | 160 |
presumptive endoderm | 1.57e-16 | 160 |
urothelium | 1.74e-16 | 5 |
transitional epithelium | 9.25e-14 | 6 |
mucosa of oral region | 1.65e-11 | 4 |
respiratory system mucosa | 1.65e-11 | 4 |
orifice | 1.59e-09 | 36 |
respiratory system | 9.74e-09 | 74 |
saliva-secreting gland | 3.19e-08 | 6 |
gland of oral region | 3.19e-08 | 6 |
gland of foregut | 3.19e-08 | 6 |
oral gland | 3.19e-08 | 6 |
oral cavity | 3.19e-08 | 6 |
digestive system | 6.84e-08 | 145 |
digestive tract | 6.84e-08 | 145 |
primitive gut | 6.84e-08 | 145 |
gland | 7.07e-08 | 59 |
oral opening | 1.38e-07 | 22 |
mouth | 2.04e-07 | 29 |
stomodeum | 2.04e-07 | 29 |
male genital duct | 3.92e-07 | 3 |
internal male genitalia | 3.92e-07 | 3 |
exocrine gland | 5.17e-07 | 31 |
exocrine system | 5.17e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 6.45e-08 | 3 |
leiomyoma | 6.45e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.