FFCP PHASE1:Hg19::chr5:138940989..138941003,+: Difference between revisions
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|ontology_enrichment_celltype_v019=CL:1000497;4.74e-08;17!CL:0002518;4.74e-08;17!CL:0000077;1.10e-07;19!CL:0000945;3.01e-07;24!CL:0000213;3.95e-07;58!CL:0000215;3.95e-07;58!CL:0000076;6.13e-07;63!CL:1000449;7.13e-07;15 | |ontology_enrichment_celltype_v019=CL:1000497;4.74e-08;17!CL:0002518;4.74e-08;17!CL:0000077;1.10e-07;19!CL:0000945;3.01e-07;24!CL:0000213;3.95e-07;58!CL:0000215;3.95e-07;58!CL:0000076;6.13e-07;63!CL:1000449;7.13e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.24e-41,253;CL:0002321,1.15e-20,250;CL:0000076,2.28e-13,63;CL:0000213,5.85e-12,58;CL:0000215,5.85e-12,58;CL:0000223,5.94e-10,58;CL:0000222,9.27e-10,121;CL:0002078,3.62e-08,45;CL:1000497,5.55e-08,17;CL:0002518,5.55e-08,17;CL:0000077,1.22e-07,19;CL:0000945,1.86e-07,24;CL:0000826,1.86e-07,24;CL:0002076,6.31e-07,42;CL:1000449,8.06e-07,15;CL:0002139,8.48e-07,24 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!4.56e-15!235;DOID:14566!7.12e-15!239;DOID:305!2.37e-13!106;DOID:0050687!9.41e-10!143;DOID:0050686!3.73e-07!137 | |ontology_enrichment_disease=DOID:162!4.56e-15!235;DOID:14566!7.12e-15!239;DOID:305!2.37e-13!106;DOID:0050687!9.41e-10!143;DOID:0050686!3.73e-07!137 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:162,4.60e-15,235;DOID:14566,7.18e-15,239;DOID:305,2.24e-13,106;DOID:0050687,9.55e-10,143;DOID:0050686,3.61e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0005172!6.60e-10!55;UBERON:0005173!6.60e-10!55;UBERON:0006554!2.40e-09!44;UBERON:0002417!3.38e-09!61;UBERON:0000916!3.38e-09!61;UBERON:0001008!1.57e-08!45;UBERON:0009569!3.49e-08!113;UBERON:0002113!5.19e-08!27;UBERON:0003918!5.19e-08!27;UBERON:0005095!5.19e-08!27;UBERON:0007687!5.19e-08!27;UBERON:0003914!1.94e-07!118;UBERON:0003104!1.97e-07!238;UBERON:0009142!1.97e-07!238;UBERON:0000487!8.65e-07!22 | |ontology_enrichment_uberon=UBERON:0005172!6.60e-10!55;UBERON:0005173!6.60e-10!55;UBERON:0006554!2.40e-09!44;UBERON:0002417!3.38e-09!61;UBERON:0000916!3.38e-09!61;UBERON:0001008!1.57e-08!45;UBERON:0009569!3.49e-08!113;UBERON:0002113!5.19e-08!27;UBERON:0003918!5.19e-08!27;UBERON:0005095!5.19e-08!27;UBERON:0007687!5.19e-08!27;UBERON:0003914!1.94e-07!118;UBERON:0003104!1.97e-07!238;UBERON:0009142!1.97e-07!238;UBERON:0000487!8.65e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0006554;2.13e-10;30!UBERON:0001008;2.13e-10;30!UBERON:0002113;5.72e-09;24!UBERON:0011143;5.72e-09;24!UBERON:0005172;3.90e-07;52!UBERON:0005173;3.90e-07;52!UBERON:0000487;5.64e-07;22!UBERON:0006555;7.13e-07;15!UBERON:0004819;7.13e-07;15!UBERON:0001285;7.13e-07;15!UBERON:0007684;7.13e-07;15!UBERON:0000490;7.66e-07;33 | |ontology_enrichment_uberon_v019=UBERON:0006554;2.13e-10;30!UBERON:0001008;2.13e-10;30!UBERON:0002113;5.72e-09;24!UBERON:0011143;5.72e-09;24!UBERON:0005172;3.90e-07;52!UBERON:0005173;3.90e-07;52!UBERON:0000487;5.64e-07;22!UBERON:0006555;7.13e-07;15!UBERON:0004819;7.13e-07;15!UBERON:0001285;7.13e-07;15!UBERON:0007684;7.13e-07;15!UBERON:0000490;7.66e-07;33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.48e-10,54;UBERON:0005173,1.48e-10,54;UBERON:0002417,8.90e-10,60;UBERON:0000916,8.90e-10,60;UBERON:0006554,1.39e-09,47;UBERON:0002113,6.81e-09,26;UBERON:0003918,6.81e-09,26;UBERON:0011143,6.81e-09,26;UBERON:0005095,6.81e-09,26;UBERON:0007687,6.81e-09,26;UBERON:0001008,8.00e-09,48;UBERON:0009569,1.37e-08,112;UBERON:0005177,3.14e-08,101;UBERON:0003914,9.63e-08,117;UBERON:0002100,6.06e-07,199;UBERON:0004211,8.06e-07,15;UBERON:0009773,8.06e-07,15;UBERON:0001231,8.06e-07,15;UBERON:0001285,8.06e-07,15;UBERON:0007684,8.06e-07,15;UBERON:0004208,8.06e-07,15;UBERON:0000487,8.58e-07,22 | |||
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| ||
|short_description=p3@UBE2D2 | |short_description=p3@UBE2D2 | ||
}} | }} |
Revision as of 07:41, 21 November 2012
Short description: | p3@UBE2D2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_UBE2D2_5end |
Coexpression cluster: | NA |
Association with transcript: | 237bp_to_ENST00000505007_5end |
EntrezGene: | UBE2D2 |
HGNC: | 12475 |
UniProt: | D6RFM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.24e-41 | 253 |
embryonic cell | 1.15e-20 | 250 |
squamous epithelial cell | 2.28e-13 | 63 |
lining cell | 5.85e-12 | 58 |
barrier cell | 5.85e-12 | 58 |
endodermal cell | 5.94e-10 | 58 |
mesodermal cell | 9.27e-10 | 121 |
meso-epithelial cell | 3.62e-08 | 45 |
kidney cell | 5.55e-08 | 17 |
kidney epithelial cell | 5.55e-08 | 17 |
mesothelial cell | 1.22e-07 | 19 |
lymphocyte of B lineage | 1.86e-07 | 24 |
pro-B cell | 1.86e-07 | 24 |
endo-epithelial cell | 6.31e-07 | 42 |
epithelial cell of nephron | 8.06e-07 | 15 |
endothelial cell of vascular tree | 8.48e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
abdomen element | 1.48e-10 | 54 |
abdominal segment element | 1.48e-10 | 54 |
abdominal segment of trunk | 8.90e-10 | 60 |
abdomen | 8.90e-10 | 60 |
urinary system structure | 1.39e-09 | 47 |
kidney | 6.81e-09 | 26 |
kidney mesenchyme | 6.81e-09 | 26 |
upper urinary tract | 6.81e-09 | 26 |
kidney rudiment | 6.81e-09 | 26 |
kidney field | 6.81e-09 | 26 |
renal system | 8.00e-09 | 48 |
subdivision of trunk | 1.37e-08 | 112 |
trunk region element | 3.14e-08 | 101 |
epithelial tube | 9.63e-08 | 117 |
trunk | 6.06e-07 | 199 |
nephron epithelium | 8.06e-07 | 15 |
renal tubule | 8.06e-07 | 15 |
nephron tubule | 8.06e-07 | 15 |
nephron | 8.06e-07 | 15 |
uriniferous tubule | 8.06e-07 | 15 |
nephrogenic mesenchyme | 8.06e-07 | 15 |
simple squamous epithelium | 8.58e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.60e-15 | 235 |
disease of cellular proliferation | 7.18e-15 | 239 |
carcinoma | 2.24e-13 | 106 |
cell type cancer | 9.55e-10 | 143 |
organ system cancer | 3.61e-07 | 137 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.