FFCP PHASE1:Hg19::chr3:104628811..104628831,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000222!4.33e-27!119;CL:0002139!1.08e-25!24;CL:0000055!1.57e-20!180;CL:0000071!4.17e-19!18;CL:0002546!4.17e-19!18;CL:0000115!1.63e-16!35;CL:0000680!3.99e-16!57;CL:0000056!3.99e-16!57;CL:0000355!3.99e-16!57;CL:1000413!1.85e-13!9;CL:0000187!1.85e-13!54;CL:0000183!9.92e-13!59;CL:0000213!7.37e-12!57;CL:0000215!7.37e-12!57;CL:0002078!1.37e-11!44;CL:0000393!3.12e-11!60;CL:0000211!3.12e-11!60;CL:0002371!4.95e-10!591;CL:0000057!7.34e-10!75;CL:0000048!2.30e-09!430;CL:0000723!2.49e-09!436;CL:0002544!2.80e-09!6;CL:0000144!6.69e-09!625;CL:0000034!1.12e-08!444;CL:0000548!1.12e-08!679;CL:0000004!1.12e-08!679;CL:0000255!1.12e-08!679;CL:0000192!1.28e-08!42;CL:0000514!1.28e-08!42;CL:0000220!1.51e-08!246;CL:0000012!1.82e-08!682;CL:0002321!2.43e-08!248;CL:0005020!3.75e-08!6;CL:0002138!3.75e-08!6;CL:0005022!3.75e-08!6;CL:0002620!1.03e-07!23;CL:0000188!1.54e-07!9;CL:0002551!4.87e-07!6;CL:0000359!8.21e-07!32 | |ontology_enrichment_celltype=CL:0000222!4.33e-27!119;CL:0002139!1.08e-25!24;CL:0000055!1.57e-20!180;CL:0000071!4.17e-19!18;CL:0002546!4.17e-19!18;CL:0000115!1.63e-16!35;CL:0000680!3.99e-16!57;CL:0000056!3.99e-16!57;CL:0000355!3.99e-16!57;CL:1000413!1.85e-13!9;CL:0000187!1.85e-13!54;CL:0000183!9.92e-13!59;CL:0000213!7.37e-12!57;CL:0000215!7.37e-12!57;CL:0002078!1.37e-11!44;CL:0000393!3.12e-11!60;CL:0000211!3.12e-11!60;CL:0002371!4.95e-10!591;CL:0000057!7.34e-10!75;CL:0000048!2.30e-09!430;CL:0000723!2.49e-09!436;CL:0002544!2.80e-09!6;CL:0000144!6.69e-09!625;CL:0000034!1.12e-08!444;CL:0000548!1.12e-08!679;CL:0000004!1.12e-08!679;CL:0000255!1.12e-08!679;CL:0000192!1.28e-08!42;CL:0000514!1.28e-08!42;CL:0000220!1.51e-08!246;CL:0000012!1.82e-08!682;CL:0002321!2.43e-08!248;CL:0005020!3.75e-08!6;CL:0002138!3.75e-08!6;CL:0005022!3.75e-08!6;CL:0002620!1.03e-07!23;CL:0000188!1.54e-07!9;CL:0002551!4.87e-07!6;CL:0000359!8.21e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.27e-30;24!CL:0000071;5.75e-30;18!CL:1000413;2.71e-25;9!CL:0000115;1.28e-20;36!CL:0002544;5.83e-13;6!CL:0002078;2.39e-11;45!CL:0002545;1.48e-10;2!CL:0000213;2.30e-09;58!CL:0000215;2.30e-09;58!CL:0002543;1.30e-07;6!CL:0002573;1.39e-07;2!CL:0000515;2.10e-07;3!CL:0002618;2.62e-07;3 | |ontology_enrichment_celltype_v019=CL:0002139;1.27e-30;24!CL:0000071;5.75e-30;18!CL:1000413;2.71e-25;9!CL:0000115;1.28e-20;36!CL:0002544;5.83e-13;6!CL:0002078;2.39e-11;45!CL:0002545;1.48e-10;2!CL:0000213;2.30e-09;58!CL:0000215;2.30e-09;58!CL:0002543;1.30e-07;6!CL:0002573;1.39e-07;2!CL:0000515;2.10e-07;3!CL:0002618;2.62e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,8.66e-31,24;CL:0000071,2.62e-30,18;CL:0002546,2.62e-30,18;CL:1000413,9.12e-26,9;CL:0000115,9.31e-23,36;CL:0002078,1.38e-17,45;CL:0000222,6.76e-14,121;CL:0002544,3.56e-13,6;CL:0000213,5.86e-13,58;CL:0000215,5.86e-13,58;CL:0002545,1.29e-10,2;CL:0002321,1.19e-07,250;CL:0002543,1.31e-07,6;CL:0002573,1.63e-07,2;CL:0002618,2.89e-07,3;CL:0000076,4.29e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;5.75e-30;18 | |ontology_enrichment_development_v019=CL:0002546;5.75e-30;18 | ||
|ontology_enrichment_disease=DOID:2394!2.69e-07!14 | |ontology_enrichment_disease=DOID:2394!2.69e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.43e-11;14 | |ontology_enrichment_disease_v019=DOID:2394;1.43e-11;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,1.58e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0000055!2.22e-21!69;UBERON:0004290!9.33e-20!70;UBERON:0001986!4.17e-19!18;UBERON:0004638!4.17e-19!18;UBERON:0004852!4.17e-19!18;UBERON:0000914!7.74e-19!83;UBERON:0002329!7.74e-19!83;UBERON:0003077!7.74e-19!83;UBERON:0003059!7.74e-19!83;UBERON:0007282!7.74e-19!83;UBERON:0009618!7.74e-19!83;UBERON:0007285!7.74e-19!83;UBERON:0002049!4.55e-18!79;UBERON:0007798!4.55e-18!79;UBERON:0001981!1.10e-17!60;UBERON:0007500!1.10e-17!60;UBERON:0004537!1.10e-17!60;UBERON:0006965!1.10e-17!60;UBERON:0000490!2.85e-16!138;UBERON:0001134!2.35e-15!61;UBERON:0002036!2.35e-15!61;UBERON:0003082!2.35e-15!61;UBERON:0004872!3.50e-15!84;UBERON:0000486!5.07e-15!82;UBERON:0000487!1.27e-14!22;UBERON:0002385!1.54e-14!63;UBERON:0001015!1.54e-14!63;UBERON:0000383!1.54e-14!63;UBERON:0001637!2.29e-14!42;UBERON:0003509!2.29e-14!42;UBERON:0004572!2.29e-14!42;UBERON:0004535!2.48e-14!110;UBERON:0001009!1.40e-13!113;UBERON:0003915!1.85e-13!9;UBERON:0004700!1.85e-13!9;UBERON:0001917!1.85e-13!9;UBERON:0006914!3.17e-12!25;UBERON:0003914!2.75e-09!118;UBERON:0004573!3.25e-09!33;UBERON:0004571!3.25e-09!33;UBERON:0005256!6.77e-09!143;UBERON:0000119!1.34e-07!312;UBERON:0000947!4.62e-07!21;UBERON:0010191!4.62e-07!21;UBERON:0000483!4.93e-07!309 | |ontology_enrichment_uberon=UBERON:0000055!2.22e-21!69;UBERON:0004290!9.33e-20!70;UBERON:0001986!4.17e-19!18;UBERON:0004638!4.17e-19!18;UBERON:0004852!4.17e-19!18;UBERON:0000914!7.74e-19!83;UBERON:0002329!7.74e-19!83;UBERON:0003077!7.74e-19!83;UBERON:0003059!7.74e-19!83;UBERON:0007282!7.74e-19!83;UBERON:0009618!7.74e-19!83;UBERON:0007285!7.74e-19!83;UBERON:0002049!4.55e-18!79;UBERON:0007798!4.55e-18!79;UBERON:0001981!1.10e-17!60;UBERON:0007500!1.10e-17!60;UBERON:0004537!1.10e-17!60;UBERON:0006965!1.10e-17!60;UBERON:0000490!2.85e-16!138;UBERON:0001134!2.35e-15!61;UBERON:0002036!2.35e-15!61;UBERON:0003082!2.35e-15!61;UBERON:0004872!3.50e-15!84;UBERON:0000486!5.07e-15!82;UBERON:0000487!1.27e-14!22;UBERON:0002385!1.54e-14!63;UBERON:0001015!1.54e-14!63;UBERON:0000383!1.54e-14!63;UBERON:0001637!2.29e-14!42;UBERON:0003509!2.29e-14!42;UBERON:0004572!2.29e-14!42;UBERON:0004535!2.48e-14!110;UBERON:0001009!1.40e-13!113;UBERON:0003915!1.85e-13!9;UBERON:0004700!1.85e-13!9;UBERON:0001917!1.85e-13!9;UBERON:0006914!3.17e-12!25;UBERON:0003914!2.75e-09!118;UBERON:0004573!3.25e-09!33;UBERON:0004571!3.25e-09!33;UBERON:0005256!6.77e-09!143;UBERON:0000119!1.34e-07!312;UBERON:0000947!4.62e-07!21;UBERON:0010191!4.62e-07!21;UBERON:0000483!4.93e-07!309 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.75e-30;18!UBERON:0001986;5.75e-30;18!UBERON:0004852;5.75e-30;18!UBERON:0003915;2.71e-25;9!UBERON:0004700;2.71e-25;9!UBERON:0001917;2.71e-25;9!UBERON:0000487;4.12e-24;22!UBERON:0006914;5.98e-21;25!UBERON:0000490;2.33e-13;33!UBERON:0001637;2.96e-12;42!UBERON:0003509;2.96e-12;42!UBERON:0004572;2.96e-12;42!UBERON:0000055;5.60e-11;65!UBERON:0002119;6.76e-11;4!UBERON:0005800;1.48e-10;2!UBERON:0001515;1.48e-10;2!UBERON:0007500;4.30e-10;56!UBERON:0001981;4.30e-10;56!UBERON:0004537;4.30e-10;56!UBERON:0002049;3.26e-09;75!UBERON:0007798;3.26e-09;75!UBERON:0000992;6.49e-09;13!UBERON:0010260;1.15e-08;9!UBERON:0003914;2.59e-08;74 | |ontology_enrichment_uberon_v019=UBERON:0004638;5.75e-30;18!UBERON:0001986;5.75e-30;18!UBERON:0004852;5.75e-30;18!UBERON:0003915;2.71e-25;9!UBERON:0004700;2.71e-25;9!UBERON:0001917;2.71e-25;9!UBERON:0000487;4.12e-24;22!UBERON:0006914;5.98e-21;25!UBERON:0000490;2.33e-13;33!UBERON:0001637;2.96e-12;42!UBERON:0003509;2.96e-12;42!UBERON:0004572;2.96e-12;42!UBERON:0000055;5.60e-11;65!UBERON:0002119;6.76e-11;4!UBERON:0005800;1.48e-10;2!UBERON:0001515;1.48e-10;2!UBERON:0007500;4.30e-10;56!UBERON:0001981;4.30e-10;56!UBERON:0004537;4.30e-10;56!UBERON:0002049;3.26e-09;75!UBERON:0007798;3.26e-09;75!UBERON:0000992;6.49e-09;13!UBERON:0010260;1.15e-08;9!UBERON:0003914;2.59e-08;74 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.62e-30,18;UBERON:0001986,2.62e-30,18;UBERON:0004852,2.62e-30,18;UBERON:0003915,9.12e-26,9;UBERON:0004700,9.12e-26,9;UBERON:0001917,9.12e-26,9;UBERON:0000487,2.18e-24,22;UBERON:0006914,3.44e-21,25;UBERON:0000055,2.29e-18,68;UBERON:0007500,4.87e-17,59;UBERON:0001981,4.87e-17,59;UBERON:0004537,4.87e-17,59;UBERON:0006965,4.87e-17,59;UBERON:0002049,1.75e-15,78;UBERON:0007798,1.75e-15,78;UBERON:0004872,2.26e-14,83;UBERON:0001637,6.89e-14,42;UBERON:0003509,6.89e-14,42;UBERON:0004572,6.89e-14,42;UBERON:0004535,1.14e-12,109;UBERON:0001009,3.28e-12,112;UBERON:0002119,5.15e-11,4;UBERON:0005800,1.29e-10,2;UBERON:0001515,1.29e-10,2;UBERON:0003914,3.12e-10,117;UBERON:0000490,2.38e-09,148;UBERON:0000992,5.78e-09,13;UBERON:0010260,1.25e-08,9;UBERON:0000926,1.41e-07,315;UBERON:0004120,1.41e-07,315;UBERON:0006603,1.41e-07,315 | |||
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| ||
|short_description=p@chr3:104628811..104628831,- | |short_description=p@chr3:104628811..104628831,- | ||
}} | }} |
Revision as of 09:00, 21 November 2012
Short description: | p@chr3:104628811..104628831, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:104628811..104628831, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 8.66e-31 | 24 |
blood vessel endothelial cell | 2.62e-30 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.62e-30 | 18 |
endothelial cell of artery | 9.12e-26 | 9 |
endothelial cell | 9.31e-23 | 36 |
meso-epithelial cell | 1.38e-17 | 45 |
mesodermal cell | 6.76e-14 | 121 |
aortic endothelial cell | 3.56e-13 | 6 |
lining cell | 5.86e-13 | 58 |
barrier cell | 5.86e-13 | 58 |
thoracic aorta endothelial cell | 1.29e-10 | 2 |
embryonic cell | 1.19e-07 | 250 |
vein endothelial cell | 1.31e-07 | 6 |
Schwann cell | 1.63e-07 | 2 |
endothelial cell of umbilical vein | 2.89e-07 | 3 |
squamous epithelial cell | 4.29e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.62e-30 | 18 |
endothelium | 2.62e-30 | 18 |
cardiovascular system endothelium | 2.62e-30 | 18 |
endothelial tube | 9.12e-26 | 9 |
arterial system endothelium | 9.12e-26 | 9 |
endothelium of artery | 9.12e-26 | 9 |
simple squamous epithelium | 2.18e-24 | 22 |
squamous epithelium | 3.44e-21 | 25 |
vessel | 2.29e-18 | 68 |
epithelial tube open at both ends | 4.87e-17 | 59 |
blood vessel | 4.87e-17 | 59 |
blood vasculature | 4.87e-17 | 59 |
vascular cord | 4.87e-17 | 59 |
vasculature | 1.75e-15 | 78 |
vascular system | 1.75e-15 | 78 |
splanchnic layer of lateral plate mesoderm | 2.26e-14 | 83 |
artery | 6.89e-14 | 42 |
arterial blood vessel | 6.89e-14 | 42 |
arterial system | 6.89e-14 | 42 |
cardiovascular system | 1.14e-12 | 109 |
circulatory system | 3.28e-12 | 112 |
left ovary | 5.15e-11 | 4 |
segment of aorta | 1.29e-10 | 2 |
thoracic aorta | 1.29e-10 | 2 |
epithelial tube | 3.12e-10 | 117 |
unilaminar epithelium | 2.38e-09 | 148 |
female gonad | 5.78e-09 | 13 |
umbilical blood vessel | 1.25e-08 | 9 |
mesoderm | 1.41e-07 | 315 |
mesoderm-derived structure | 1.41e-07 | 315 |
presumptive mesoderm | 1.41e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.58e-11 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.