FFCP PHASE1:Hg19::chr12:7864021..7864038,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000039!5.20e-47!7;CL:0000586!5.20e-47!7;CL:0002322!6.70e-33!5;CL:0000540!2.75e-10!6;CL:0000031!2.75e-10!6;CL:0000404!2.75e-10!6;CL:0000047!7.85e-08!8;CL:0002563!2.35e-07!4 | |ontology_enrichment_celltype=CL:0000039!5.20e-47!7;CL:0000586!5.20e-47!7;CL:0002322!6.70e-33!5;CL:0000540!2.75e-10!6;CL:0000031!2.75e-10!6;CL:0000404!2.75e-10!6;CL:0000047!7.85e-08!8;CL:0002563!2.35e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.25e-74;7!CL:0000586;2.25e-74;7!CL:0002322;1.28e-51;5!CL:0002321;2.99e-17;15!CL:0000540;6.64e-16;6!CL:0000404;6.64e-16;6!CL:0000148;6.75e-10;10!CL:0000147;3.26e-07;14 | |ontology_enrichment_celltype_v019=CL:0000039;2.25e-74;7!CL:0000586;2.25e-74;7!CL:0002322;1.28e-51;5!CL:0002321;2.99e-17;15!CL:0000540;6.64e-16;6!CL:0000404;6.64e-16;6!CL:0000148;6.75e-10;10!CL:0000147;3.26e-07;14 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.25e-74,7;CL:0000586,2.25e-74,7;CL:0002322,1.03e-51,5;CL:0000540,6.99e-16,6;CL:0000031,6.99e-16,6;CL:0000404,6.99e-16,6;CL:0000047,4.59e-12,8;CL:0000148,6.35e-10,10;CL:0000541,6.35e-10,10;CL:0000147,3.12e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.38e-17;10!UBERON:0005564;1.38e-17;10!CL:0000031;6.64e-16;6 | |ontology_enrichment_development_v019=UBERON:0009117;1.38e-17;10!UBERON:0005564;1.38e-17;10!CL:0000031;6.64e-16;6 | ||
|ontology_enrichment_disease=DOID:3095!1.94e-23!22;DOID:2994!1.94e-23!22;DOID:1799!4.66e-08!1;DOID:10165!4.66e-08!1;DOID:1798!4.66e-08!1;DOID:178!1.44e-07!1;DOID:326!1.44e-07!1;DOID:3978!1.44e-07!1;DOID:3394!1.44e-07!1;DOID:5844!1.44e-07!1 | |ontology_enrichment_disease=DOID:3095!1.94e-23!22;DOID:2994!1.94e-23!22;DOID:1799!4.66e-08!1;DOID:10165!4.66e-08!1;DOID:1798!4.66e-08!1;DOID:178!1.44e-07!1;DOID:326!1.44e-07!1;DOID:3978!1.44e-07!1;DOID:3394!1.44e-07!1;DOID:5844!1.44e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:3095;2.66e-30;22!DOID:2994;2.66e-30;22!DOID:1799;6.26e-12;1!DOID:10165;6.26e-12;1!DOID:1798;6.26e-12;1 | |ontology_enrichment_disease_v019=DOID:3095;2.66e-30;22!DOID:2994;2.66e-30;22!DOID:1799;6.26e-12;1!DOID:10165;6.26e-12;1!DOID:1798;6.26e-12;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,2.66e-30,22;DOID:2994,2.66e-30,22;DOID:1799,6.26e-12,1;DOID:10165,6.26e-12,1;DOID:1798,6.26e-12,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000473;6.55e-22;8!UBERON:0003135;5.17e-16;11!UBERON:0000922;1.85e-10;49!UBERON:0000991;1.76e-08;21!UBERON:0003101;4.20e-08;22!UBERON:0000079;4.20e-08;22 | |ontology_enrichment_uberon_v019=UBERON:0000473;6.55e-22;8!UBERON:0003135;5.17e-16;11!UBERON:0000922;1.85e-10;49!UBERON:0000991;1.76e-08;21!UBERON:0003101;4.20e-08;22!UBERON:0000079;4.20e-08;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.55e-22,8;UBERON:0003135,5.17e-16,11;UBERON:0000991,1.76e-08,21;UBERON:0009196,1.76e-08,21;UBERON:0009117,1.76e-08,21;UBERON:0005564,1.76e-08,21;UBERON:0004176,4.20e-08,22;UBERON:0003101,4.20e-08,22;UBERON:0000079,4.20e-08,22 | |||
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|short_description=p1@DPPA3 | |short_description=p1@DPPA3 | ||
}} | }} |
Revision as of 11:34, 21 November 2012
Short description: | p1@DPPA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_DPPA3_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | -11bp_to_ENST00000345088_5end |
EntrezGene: | DPPA3 |
HGNC: | 19199 |
UniProt: | Q6W0C5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.25e-74 | 7 |
germ cell | 2.25e-74 | 7 |
embryonic stem cell | 1.03e-51 | 5 |
neuron | 6.99e-16 | 6 |
neuroblast | 6.99e-16 | 6 |
electrically signaling cell | 6.99e-16 | 6 |
neuronal stem cell | 4.59e-12 | 8 |
melanocyte | 6.35e-10 | 10 |
melanoblast | 6.35e-10 | 10 |
pigment cell | 3.12e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
testis | 6.55e-22 | 8 |
male reproductive organ | 5.17e-16 | 11 |
gonad | 1.76e-08 | 21 |
indifferent external genitalia | 1.76e-08 | 21 |
indifferent gonad | 1.76e-08 | 21 |
gonad primordium | 1.76e-08 | 21 |
external genitalia | 4.20e-08 | 22 |
male organism | 4.20e-08 | 22 |
male reproductive system | 4.20e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.66e-30 | 22 |
germ cell cancer | 2.66e-30 | 22 |
islet cell tumor | 6.26e-12 | 1 |
endocrine pancreas cancer | 6.26e-12 | 1 |
pancreatic endocrine carcinoma | 6.26e-12 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.