FFCP PHASE1:Hg19::chr5:135540733..135540788,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=N | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
Revision as of 01:38, 10 July 2013
| Short description: | p@chr5:135540733..135540788, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr5:135540733..135540788, - |
| Coexpression cluster: | C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr5:135540733..135540788- |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neuronal stem cell | 2.25e-61 | 8 |
| astrocyte of the cerebral cortex | 2.23e-59 | 3 |
| neural cell | 1.50e-58 | 25 |
| oligodendrocyte | 1.77e-45 | 7 |
| macroglial cell | 1.77e-45 | 7 |
| astrocyte | 1.77e-45 | 7 |
| oligodendrocyte precursor cell | 1.77e-45 | 7 |
| neuron | 6.18e-30 | 6 |
| neuroblast | 6.18e-30 | 6 |
| electrically signaling cell | 6.18e-30 | 6 |
| Ontology term | p-value | n |
|---|---|---|
| central nervous system | 6.71e-19 | 81 |
| nervous system | 5.12e-17 | 89 |
| ectoderm-derived structure | 8.77e-09 | 171 |
| ectoderm | 8.77e-09 | 171 |
| presumptive ectoderm | 8.77e-09 | 171 |
| cerebral cortex | 1.79e-07 | 25 |
| pallium | 1.79e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
