FFCP PHASE1:Hg19::chr5:149980622..149980648,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=11346 | |EntrezGene=11346 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30672 | |HGNC=30672 | ||
|TSSclassifier=S | |||
|UniProt=Q8N3V7 | |UniProt=Q8N3V7 | ||
|association_with_transcript=0bp_to_ENST00000394243,NM_001166208,uc003lsn.2_5end | |association_with_transcript=0bp_to_ENST00000394243,NM_001166208,uc003lsn.2_5end | ||
Revision as of 02:23, 10 July 2013
| Short description: | p7@SYNPO |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_7_at_SYNPO_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000394243, NM_001166208, uc003lsn.2_5end |
| EntrezGene: | SYNPO |
| HGNC: | 30672 |
| UniProt: | Q8N3V7 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p7@SYNPO |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| cardiac fibroblast | 2.47e-11 | 6 |
| respiratory epithelial cell | 1.36e-08 | 13 |
| cardiocyte | 7.52e-08 | 16 |
| transitional epithelial cell | 1.03e-07 | 4 |
| urothelial cell | 1.03e-07 | 4 |
| Ontology term | p-value | n |
|---|---|---|
| heart | 1.38e-17 | 24 |
| primitive heart tube | 1.38e-17 | 24 |
| primary heart field | 1.38e-17 | 24 |
| anterior lateral plate mesoderm | 1.38e-17 | 24 |
| heart tube | 1.38e-17 | 24 |
| heart primordium | 1.38e-17 | 24 |
| cardiac mesoderm | 1.38e-17 | 24 |
| cardiogenic plate | 1.38e-17 | 24 |
| heart rudiment | 1.38e-17 | 24 |
| primary circulatory organ | 1.03e-16 | 27 |
| Ontology term | p-value | n |
|---|---|---|
| neuroectodermal tumor | 1.69e-07 | 10 |
| neuroendocrine tumor | 5.93e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
