FFCP PHASE1:Hg19::chr8:126010783..126010808,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6713 | |EntrezGene=6713 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11279 | |HGNC=11279 | ||
|TSSclassifier=S | |||
|UniProt=E5RJH9 | |UniProt=E5RJH9 | ||
|association_with_transcript=0bp_to_ENST00000521232_5end | |association_with_transcript=0bp_to_ENST00000521232_5end | ||
Revision as of 17:39, 10 July 2013
| Short description: | p2@SQLE |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_SQLE_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000521232_5end |
| EntrezGene: | SQLE |
| HGNC: | 11279 |
| UniProt: | E5RJH9 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@SQLE |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| embryonic cell | 1.33e-16 | 250 |
| epithelial cell | 2.76e-11 | 253 |
| ectodermal cell | 1.45e-07 | 72 |
| muscle precursor cell | 4.47e-07 | 58 |
| myoblast | 4.47e-07 | 58 |
| multi-potent skeletal muscle stem cell | 4.47e-07 | 58 |
| muscle cell | 6.46e-07 | 55 |
| mesodermal cell | 6.55e-07 | 121 |
| Ontology term | p-value | n |
|---|---|---|
| cell layer | 7.09e-13 | 309 |
| epithelium | 2.38e-12 | 306 |
| mesenchyme | 3.50e-10 | 160 |
| entire embryonic mesenchyme | 3.50e-10 | 160 |
| trunk mesenchyme | 1.84e-09 | 122 |
| multilaminar epithelium | 5.38e-09 | 83 |
| trunk | 1.15e-08 | 199 |
| primordium | 1.19e-08 | 160 |
| unilaminar epithelium | 3.13e-08 | 148 |
| epithelial vesicle | 7.56e-08 | 78 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
