FFCP PHASE1:Hg19::chr11:20075386..20075404,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C263|description=CAGE_peak_at_chr11:20075386..20075404,+|id=chr11:20075386..20075404,+|ontology_enrichment_celltype=CL:0002076!1.86e-19!43;CL:0002251!2.06e-19!21;CL:0002623!2.12e-14!3;CL:0002621!7.96e-14!3;CL:0000223!2.99e-13!59;CL:0000575!6.48e-10!2;CL:0000622!8.22e-09!5;CL:0002159!3.33e-08!13;CL:0002368!6.57e-08!13;CL:0000066!1.21e-07!254;CL:0000154!2.09e-07!6|ontology_enrichment_celltype_v019=CL:0002623;4.65e-27;3!CL:0000622;1.12e-16;5!CL:0000154;4.53e-14;6!CL:0000575;3.70e-11;2!CL:0000150;1.05e-09;9!CL:0002251;1.53e-09;20|ontology_enrichment_celltype_v019_2=CL:0002623,4.07e-27,3;CL:0000622,1.03e-16,5;CL:0000154,4.24e-14,6;CL:0000575,3.35e-11,2;CL:0000150,1.01e-09,9;CL:0002251,1.53e-09,20|ontology_enrichment_development_v019=UBERON:0008814;2.47e-11;2!UBERON:0010056;2.47e-11;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000166!7.65e-24!21;UBERON:0000165!1.12e-20!28;UBERON:0000930!1.12e-20!28;UBERON:0001004!1.64e-15!72;UBERON:0001444!3.32e-15!48;UBERON:0001949!7.96e-14!3;UBERON:0000161!2.26e-13!35;UBERON:0001042!3.54e-11!10;UBERON:0009145!3.54e-11!10;UBERON:0003408!5.30e-11!10;UBERON:0003102!5.50e-11!95;UBERON:0000974!9.94e-11!10;UBERON:0006562!3.94e-10!11;UBERON:0000153!9.82e-09!129;UBERON:0007811!9.82e-09!129;UBERON:0000078!1.12e-08!18;UBERON:0003729!1.38e-08!5;UBERON:0001044!2.09e-07!6;UBERON:0003293!2.09e-07!6;UBERON:0003294!2.09e-07!6;UBERON:0010047!2.09e-07!6;UBERON:0000167!2.09e-07!6;UBERON:0004119!2.61e-07!169;UBERON:0000925!2.61e-07!169;UBERON:0006595!2.61e-07!169;UBERON:0001723!3.63e-07!3;UBERON:0001033!3.63e-07!3;UBERON:0010056!3.63e-07!3;UBERON:0000002!5.33e-07!6;UBERON:0001560!5.33e-07!6|ontology_enrichment_uberon_v019=UBERON:0001723;2.72e-27;3!UBERON:0001033;2.72e-27;3!UBERON:0000165;2.33e-25;28!UBERON:0002372;1.88e-21;1!UBERON:0001961;1.88e-21;1!UBERON:0001744;1.88e-21;1!UBERON:0001042;1.88e-21;1!UBERON:0001735;1.88e-21;1!UBERON:0007029;6.31e-21;1!UBERON:0000161;4.45e-17;19!UBERON:0000166;4.45e-17;19!UBERON:0000153;7.96e-16;54!UBERON:0001044;4.53e-14;6!UBERON:0003293;4.53e-14;6!UBERON:0003294;4.53e-14;6!UBERON:0010047;4.53e-14;6!UBERON:0003408;4.53e-14;6!UBERON:0000167;4.53e-14;6!UBERON:0007811;8.09e-14;52!UBERON:0000033;2.64e-13;50!UBERON:0001444;1.82e-11;48!UBERON:0006562;2.02e-11;2!UBERON:0002370;2.47e-11;2!UBERON:0005058;2.47e-11;2!UBERON:0009113;2.47e-11;2!UBERON:0000020;2.25e-08;23!UBERON:0001032;4.75e-08;24!UBERON:0004456;4.75e-08;24|ontology_enrichment_uberon_v019_2=UBERON:0000166,3.23e-32,22;UBERON:0001042,4.32e-32,10;UBERON:0009145,4.32e-32,10;UBERON:0006562,3.16e-29,11;UBERON:0001723,3.11e-27,3;UBERON:0001033,3.11e-27,3;UBERON:0010056,3.11e-27,3;UBERON:0000165,1.81e-24,29;UBERON:0000930,1.81e-24,29;UBERON:0002372,1.88e-21,1;UBERON:0001961,1.88e-21,1;UBERON:0001744,1.88e-21,1;UBERON:0001735,1.88e-21,1;UBERON:0007029,6.31e-21,1;UBERON:0000153,4.30e-20,62;UBERON:0007811,4.30e-20,62;UBERON:0000161,1.01e-19,36;UBERON:0001444,1.50e-19,49;UBERON:0003408,1.94e-18,10;UBERON:0001557,3.93e-17,19;UBERON:0000033,4.33e-17,56;UBERON:0001044,4.24e-14,6;UBERON:0003293,4.24e-14,6;UBERON:0003294,4.24e-14,6;UBERON:0010047,4.24e-14,6;UBERON:0000167,4.24e-14,6;UBERON:0001004,6.53e-13,74;UBERON:0003102,1.92e-12,99;UBERON:0008814,1.41e-10,18;UBERON:0000974,6.04e-09,10;UBERON:0001041,3.99e-08,87;UBERON:0000020,4.75e-08,24;UBERON:0001032,4.75e-08,24;UBERON:0004456,4.75e-08,24;UBERON:0000072,3.94e-07,47;UBERON:0004121,6.86e-07,171;UBERON:0000924,6.86e-07,171;UBERON:0006601,6.86e-07,171|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45718115317017,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.272746120590835,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.804231779293047,0.740707561268237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503946384596579,0.141775097242386,0.716468181622786,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.765676274967505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49008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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C263 | |||
|description=CAGE_peak_at_chr11:20075386..20075404,+ | |||
|id=chr11:20075386..20075404,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.86e-19!43;CL:0002251!2.06e-19!21;CL:0002623!2.12e-14!3;CL:0002621!7.96e-14!3;CL:0000223!2.99e-13!59;CL:0000575!6.48e-10!2;CL:0000622!8.22e-09!5;CL:0002159!3.33e-08!13;CL:0002368!6.57e-08!13;CL:0000066!1.21e-07!254;CL:0000154!2.09e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002623;4.65e-27;3!CL:0000622;1.12e-16;5!CL:0000154;4.53e-14;6!CL:0000575;3.70e-11;2!CL:0000150;1.05e-09;9!CL:0002251;1.53e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,4.07e-27,3;CL:0000622,1.03e-16,5;CL:0000154,4.24e-14,6;CL:0000575,3.35e-11,2;CL:0000150,1.01e-09,9;CL:0002251,1.53e-09,20 | |||
|ontology_enrichment_development_v019=UBERON:0008814;2.47e-11;2!UBERON:0010056;2.47e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000166!7.65e-24!21;UBERON:0000165!1.12e-20!28;UBERON:0000930!1.12e-20!28;UBERON:0001004!1.64e-15!72;UBERON:0001444!3.32e-15!48;UBERON:0001949!7.96e-14!3;UBERON:0000161!2.26e-13!35;UBERON:0001042!3.54e-11!10;UBERON:0009145!3.54e-11!10;UBERON:0003408!5.30e-11!10;UBERON:0003102!5.50e-11!95;UBERON:0000974!9.94e-11!10;UBERON:0006562!3.94e-10!11;UBERON:0000153!9.82e-09!129;UBERON:0007811!9.82e-09!129;UBERON:0000078!1.12e-08!18;UBERON:0003729!1.38e-08!5;UBERON:0001044!2.09e-07!6;UBERON:0003293!2.09e-07!6;UBERON:0003294!2.09e-07!6;UBERON:0010047!2.09e-07!6;UBERON:0000167!2.09e-07!6;UBERON:0004119!2.61e-07!169;UBERON:0000925!2.61e-07!169;UBERON:0006595!2.61e-07!169;UBERON:0001723!3.63e-07!3;UBERON:0001033!3.63e-07!3;UBERON:0010056!3.63e-07!3;UBERON:0000002!5.33e-07!6;UBERON:0001560!5.33e-07!6 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0000166,3.23e-32,22;UBERON:0001042,4.32e-32,10;UBERON:0009145,4.32e-32,10;UBERON:0006562,3.16e-29,11;UBERON:0001723,3.11e-27,3;UBERON:0001033,3.11e-27,3;UBERON:0010056,3.11e-27,3;UBERON:0000165,1.81e-24,29;UBERON:0000930,1.81e-24,29;UBERON:0002372,1.88e-21,1;UBERON:0001961,1.88e-21,1;UBERON:0001744,1.88e-21,1;UBERON:0001735,1.88e-21,1;UBERON:0007029,6.31e-21,1;UBERON:0000153,4.30e-20,62;UBERON:0007811,4.30e-20,62;UBERON:0000161,1.01e-19,36;UBERON:0001444,1.50e-19,49;UBERON:0003408,1.94e-18,10;UBERON:0001557,3.93e-17,19;UBERON:0000033,4.33e-17,56;UBERON:0001044,4.24e-14,6;UBERON:0003293,4.24e-14,6;UBERON:0003294,4.24e-14,6;UBERON:0010047,4.24e-14,6;UBERON:0000167,4.24e-14,6;UBERON:0001004,6.53e-13,74;UBERON:0003102,1.92e-12,99;UBERON:0008814,1.41e-10,18;UBERON:0000974,6.04e-09,10;UBERON:0001041,3.99e-08,87;UBERON:0000020,4.75e-08,24;UBERON:0001032,4.75e-08,24;UBERON:0004456,4.75e-08,24;UBERON:0000072,3.94e-07,47;UBERON:0004121,6.86e-07,171;UBERON:0000924,6.86e-07,171;UBERON:0006601,6.86e-07,171 | |||
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|short_description=p@chr11:20075386..20075404,+ | |||
}} |
Revision as of 17:08, 10 September 2013
Short description: | p@chr11:20075386..20075404, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:20075386..20075404, + |
Coexpression cluster: | C263_cervical_keratoacanthoma_tongue_skin_esophagus_throat_tonsil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 4.07e-27 | 3 |
acinar cell | 1.03e-16 | 5 |
protein secreting cell | 4.24e-14 | 6 |
corneal epithelial cell | 3.35e-11 | 2 |
glandular epithelial cell | 1.01e-09 | 9 |
epithelial cell of alimentary canal | 1.53e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
oral opening | 3.23e-32 | 22 |
chordate pharynx | 4.32e-32 | 10 |
pharyngeal region of foregut | 4.32e-32 | 10 |
pharynx | 3.16e-29 | 11 |
tongue | 3.11e-27 | 3 |
gustatory system | 3.11e-27 | 3 |
future tongue | 3.11e-27 | 3 |
mouth | 1.81e-24 | 29 |
stomodeum | 1.81e-24 | 29 |
tonsil | 1.88e-21 | 1 |
mucosa-associated lymphoid tissue | 1.88e-21 | 1 |
lymphoid tissue | 1.88e-21 | 1 |
tonsillar ring | 1.88e-21 | 1 |
surface | 6.31e-21 | 1 |
anterior region of body | 4.30e-20 | 62 |
craniocervical region | 4.30e-20 | 62 |
orifice | 1.01e-19 | 36 |
subdivision of head | 1.50e-19 | 49 |
gland of gut | 1.94e-18 | 10 |
upper respiratory tract | 3.93e-17 | 19 |
head | 4.33e-17 | 56 |
saliva-secreting gland | 4.24e-14 | 6 |
gland of oral region | 4.24e-14 | 6 |
gland of foregut | 4.24e-14 | 6 |
oral gland | 4.24e-14 | 6 |
oral cavity | 4.24e-14 | 6 |
respiratory system | 6.53e-13 | 74 |
surface structure | 1.92e-12 | 99 |
pharyngeal arch system | 1.41e-10 | 18 |
neck | 6.04e-09 | 10 |
foregut | 3.99e-08 | 87 |
sense organ | 4.75e-08 | 24 |
sensory system | 4.75e-08 | 24 |
entire sense organ system | 4.75e-08 | 24 |
segment of respiratory tract | 3.94e-07 | 47 |
ectoderm-derived structure | 6.86e-07 | 171 |
ectoderm | 6.86e-07 | 171 |
presumptive ectoderm | 6.86e-07 | 171 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.