FFCP PHASE1:Hg19::chr11:65325179..65325200,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4054|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6716|TSSclassifier=S|UniProt=F5GWC4|association_with_transcript=35bp_to_ENST00000536982_5end|description=CAGE_peak_20_at_LTBP3_5end|id=chr11:65325179..65325200,-|ontology_enrichment_celltype=CL:0000055!1.49e-07!180|ontology_enrichment_celltype_v019=CL:0000064;1.13e-20;3!CL:0000067;1.13e-20;3!CL:0005012;1.13e-20;3!CL:0002304;1.13e-20;3!CL:0000306;2.05e-15;4!CL:0002222;2.05e-15;4!CL:0002224;2.05e-15;4!CL:0000075;2.57e-08;27!CL:0002591;3.54e-08;1!CL:0000342;9.38e-08;1!CL:0002565;9.38e-08;1!CL:0002616;9.38e-08;1|ontology_enrichment_celltype_v019_2=CL:0000064,4.65e-21,3;CL:0000067,4.65e-21,3;CL:0005012,4.65e-21,3;CL:0002304,4.65e-21,3;CL:0000306,1.29e-15,4;CL:0002222,1.29e-15,4;CL:0002224,1.29e-15,4;CL:0000075,1.89e-08,27;CL:0002591,3.80e-08,1;CL:0000342,4.99e-08,1;CL:0002565,4.99e-08,1;CL:0002616,5.33e-08,1|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007625!2.24e-08!11;UBERON:0002346!4.93e-07!90;UBERON:0003075!5.45e-07!86;UBERON:0007284!5.45e-07!86|ontology_enrichment_uberon_v019=UBERON:0007625;5.16e-37;11!UBERON:0000488;1.11e-26;4!UBERON:0001801;3.03e-22;14!UBERON:0000019;5.72e-21;19!UBERON:0000047;5.72e-21;19!UBERON:0004088;5.72e-21;19!UBERON:0010230;5.72e-21;19!UBERON:0001778;1.13e-20;3!UBERON:0001775;1.13e-20;3!UBERON:0000970;7.28e-20;20!UBERON:0002104;7.27e-19;21!UBERON:0001456;7.27e-19;21!UBERON:0002203;7.22e-18;6!UBERON:0001768;7.22e-18;6!UBERON:0002200;7.22e-18;6!UBERON:0000020;3.99e-17;23!UBERON:0001032;2.30e-16;24!UBERON:0004456;2.30e-16;24!UBERON:0010371;1.22e-15;31!UBERON:0010077;2.05e-15;4!UBERON:0005389;2.05e-15;4!UBERON:0000484;2.05e-15;4!UBERON:0000965;2.05e-15;4!UBERON:0001803;2.05e-15;4!UBERON:0006876;8.16e-10;11!UBERON:0002135;9.38e-08;1!UBERON:0002506;9.38e-08;1!UBERON:0001769;9.38e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0007625,1.09e-37,11;UBERON:0000488,2.44e-27,4;UBERON:0001801,1.07e-22,14;UBERON:0001778,4.65e-21,3;UBERON:0001775,4.65e-21,3;UBERON:0000019,3.16e-20,20;UBERON:0000047,3.16e-20,20;UBERON:0010312,3.16e-20,20;UBERON:0004088,3.16e-20,20;UBERON:0010230,3.16e-20,20;UBERON:0003072,3.16e-20,20;UBERON:0004128,3.16e-20,20;UBERON:0003071,3.16e-20,20;UBERON:0000970,3.30e-19,21;UBERON:0002104,3.30e-19,21;UBERON:0002203,2.66e-18,6;UBERON:0001768,2.66e-18,6;UBERON:0002200,2.66e-18,6;UBERON:0001456,2.78e-18,22;UBERON:0000020,1.16e-16,24;UBERON:0001032,1.16e-16,24;UBERON:0004456,1.16e-16,24;UBERON:0010077,1.29e-15,4;UBERON:0005389,1.29e-15,4;UBERON:0000484,1.29e-15,4;UBERON:0002546,1.29e-15,4;UBERON:0000965,1.29e-15,4;UBERON:0001803,1.29e-15,4;UBERON:0003073,1.29e-15,4;UBERON:0005426,1.29e-15,4;UBERON:0005085,1.23e-12,31;UBERON:0006876,4.81e-10,11;UBERON:0003075,3.55e-09,82;UBERON:0007284,3.55e-09,82;UBERON:0002346,1.19e-08,86;UBERON:0000033,3.28e-08,56;UBERON:0000076,4.76e-08,8;UBERON:0002506,4.99e-08,1;UBERON:0001769,4.99e-08,1;UBERON:0002135,1.26e-07,1;UBERON:0001444,1.46e-07,49;UBERON:0000153,2.81e-07,62;UBERON:0007811,2.81e-07,62;UBERON:0001048,2.86e-07,160;UBERON:0003056,3.22e-07,61;UBERON:0010371,8.58e-07,104|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,1.74467704820074,0,0,0,0.245733936501509,0,0,0,0,0,0,0.602694528023977,0,0,1.60057375499824,0.816002764977012,0.313454721478088,1.14494394852423,0.273748850145768,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0.786021525498329,0.205601498999509,0.167186495390678,0,0,0,0.111410456885174,0,0,0.541607727530031,0.128091319725675,0,0.493313713811028,0.276350017785848,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0.950452044448374,0,0,0,0.236777252044017,0,0,0,0.289648807765598,2.43806866313962,0.670700859703636,0,0.361439152384566,1.00267582127178,0.869079113764942,1.5905718941022,0,1.89069634328136,2.66075276955077,2.63504357079378,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0.56530794192401,0,0,0.208994966536811,0,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.264818361626438,0.860509862246441,0.354668382198357,0.560677600142307,0,0.49333509683432,0,0.269421344139376,0,0.151357427644931,0,0,0,0.570471821544449,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0.113432183160021,0.358779271377724,0,0,0.900273288253207,0.103052529238439,0.257640540045629,0,0.506328996723799,0,1.00973509697646,0,0.323292113637624,0,0.10075209822764,0.339121184620975,0,0,0,0,0,0.232387885739037,0.10366105501537,0.252320850875628,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,1.88724591328378,0,0,0,0,0.325808305310325,0,4.3299402607582,1.39116485970092,1.6437217193015,0.144366447761074,0,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432,0.112131862580613,0.25458863311266,0.202117188958219,0,0,0.134704106029175,0,0.332660356546013,0,0,0,0.808426818959282,0,0.122241444182866,0.406896178315738,0.665756774185513,0.201273793591026,0|short_description=p20@LTBP3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4054 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6716 | |||
|TSSclassifier=S | |||
|UniProt=F5GWC4 | |||
|association_with_transcript=35bp_to_ENST00000536982_5end | |||
|description=CAGE_peak_20_at_LTBP3_5end | |||
|id=chr11:65325179..65325200,- | |||
|ontology_enrichment_celltype=CL:0000055!1.49e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000064;1.13e-20;3!CL:0000067;1.13e-20;3!CL:0005012;1.13e-20;3!CL:0002304;1.13e-20;3!CL:0000306;2.05e-15;4!CL:0002222;2.05e-15;4!CL:0002224;2.05e-15;4!CL:0000075;2.57e-08;27!CL:0002591;3.54e-08;1!CL:0000342;9.38e-08;1!CL:0002565;9.38e-08;1!CL:0002616;9.38e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,4.65e-21,3;CL:0000067,4.65e-21,3;CL:0005012,4.65e-21,3;CL:0002304,4.65e-21,3;CL:0000306,1.29e-15,4;CL:0002222,1.29e-15,4;CL:0002224,1.29e-15,4;CL:0000075,1.89e-08,27;CL:0002591,3.80e-08,1;CL:0000342,4.99e-08,1;CL:0002565,4.99e-08,1;CL:0002616,5.33e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007625!2.24e-08!11;UBERON:0002346!4.93e-07!90;UBERON:0003075!5.45e-07!86;UBERON:0007284!5.45e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;5.16e-37;11!UBERON:0000488;1.11e-26;4!UBERON:0001801;3.03e-22;14!UBERON:0000019;5.72e-21;19!UBERON:0000047;5.72e-21;19!UBERON:0004088;5.72e-21;19!UBERON:0010230;5.72e-21;19!UBERON:0001778;1.13e-20;3!UBERON:0001775;1.13e-20;3!UBERON:0000970;7.28e-20;20!UBERON:0002104;7.27e-19;21!UBERON:0001456;7.27e-19;21!UBERON:0002203;7.22e-18;6!UBERON:0001768;7.22e-18;6!UBERON:0002200;7.22e-18;6!UBERON:0000020;3.99e-17;23!UBERON:0001032;2.30e-16;24!UBERON:0004456;2.30e-16;24!UBERON:0010371;1.22e-15;31!UBERON:0010077;2.05e-15;4!UBERON:0005389;2.05e-15;4!UBERON:0000484;2.05e-15;4!UBERON:0000965;2.05e-15;4!UBERON:0001803;2.05e-15;4!UBERON:0006876;8.16e-10;11!UBERON:0002135;9.38e-08;1!UBERON:0002506;9.38e-08;1!UBERON:0001769;9.38e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,1.09e-37,11;UBERON:0000488,2.44e-27,4;UBERON:0001801,1.07e-22,14;UBERON:0001778,4.65e-21,3;UBERON:0001775,4.65e-21,3;UBERON:0000019,3.16e-20,20;UBERON:0000047,3.16e-20,20;UBERON:0010312,3.16e-20,20;UBERON:0004088,3.16e-20,20;UBERON:0010230,3.16e-20,20;UBERON:0003072,3.16e-20,20;UBERON:0004128,3.16e-20,20;UBERON:0003071,3.16e-20,20;UBERON:0000970,3.30e-19,21;UBERON:0002104,3.30e-19,21;UBERON:0002203,2.66e-18,6;UBERON:0001768,2.66e-18,6;UBERON:0002200,2.66e-18,6;UBERON:0001456,2.78e-18,22;UBERON:0000020,1.16e-16,24;UBERON:0001032,1.16e-16,24;UBERON:0004456,1.16e-16,24;UBERON:0010077,1.29e-15,4;UBERON:0005389,1.29e-15,4;UBERON:0000484,1.29e-15,4;UBERON:0002546,1.29e-15,4;UBERON:0000965,1.29e-15,4;UBERON:0001803,1.29e-15,4;UBERON:0003073,1.29e-15,4;UBERON:0005426,1.29e-15,4;UBERON:0005085,1.23e-12,31;UBERON:0006876,4.81e-10,11;UBERON:0003075,3.55e-09,82;UBERON:0007284,3.55e-09,82;UBERON:0002346,1.19e-08,86;UBERON:0000033,3.28e-08,56;UBERON:0000076,4.76e-08,8;UBERON:0002506,4.99e-08,1;UBERON:0001769,4.99e-08,1;UBERON:0002135,1.26e-07,1;UBERON:0001444,1.46e-07,49;UBERON:0000153,2.81e-07,62;UBERON:0007811,2.81e-07,62;UBERON:0001048,2.86e-07,160;UBERON:0003056,3.22e-07,61;UBERON:0010371,8.58e-07,104 | |||
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| |||
|short_description=p20@LTBP3 | |||
}} |
Revision as of 18:58, 10 September 2013
Short description: | p20@LTBP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_20_at_LTBP3_5end |
Coexpression cluster: | NA |
Association with transcript: | 35bp_to_ENST00000536982_5end |
EntrezGene: | LTBP3 |
HGNC: | 6716 |
UniProt: | F5GWC4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 4.65e-21 | 3 |
ciliated epithelial cell | 4.65e-21 | 3 |
multi-ciliated epithelial cell | 4.65e-21 | 3 |
non-pigmented ciliary epithelial cell | 4.65e-21 | 3 |
crystallin accumulating cell | 1.29e-15 | 4 |
vertebrate lens cell | 1.29e-15 | 4 |
lens epithelial cell | 1.29e-15 | 4 |
columnar/cuboidal epithelial cell | 1.89e-08 | 27 |
smooth muscle cell of the pulmonary artery | 3.80e-08 | 1 |
pigment cell (sensu Vertebrata) | 4.99e-08 | 1 |
iris pigment epithelial cell | 4.99e-08 | 1 |
perirenal adipocyte cell | 5.33e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.