FFCP PHASE1:Hg19::chr13:114897998..114898009,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=22821|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20331|TSSclassifier=S|UniProt=B7Z3G9|association_with_transcript=17bp_to_ENST00000542651_5end|description=CAGE_peak_3_at_RASA3_5end|id=chr13:114897998..114898009,-|ontology_enrichment_celltype=CL:0000791!1.15e-10!18;CL:0000789!1.15e-10!18;CL:0002420!1.15e-10!18;CL:0002419!1.15e-10!18;CL:0000790!1.15e-10!18;CL:0000625!2.47e-08!11;CL:0000738!5.28e-08!140;CL:0000115!5.88e-08!35;CL:0002087!7.09e-08!119;CL:0002031!3.77e-07!124;CL:0002057!6.66e-07!42|ontology_enrichment_celltype_v019=CL:0000791;1.83e-13;18!CL:0000789;1.83e-13;18!CL:0002419;1.83e-13;18!CL:0000625;4.05e-10;11!CL:0000115;1.68e-07;36!CL:0000084;2.12e-07;25!CL:0000071;3.14e-07;18|ontology_enrichment_celltype_v019_2=CL:0000791,5.89e-13,18;CL:0000789,5.89e-13,18;CL:0002420,5.89e-13,18;CL:0002419,5.89e-13,18;CL:0000790,5.89e-13,18;CL:0000738,1.14e-11,136;CL:0002087,6.22e-11,115;CL:0000625,4.85e-10,11;CL:0002031,5.09e-10,120;CL:0000115,2.85e-09,36;CL:0000037,1.48e-08,168;CL:0002032,5.31e-08,161;CL:0000837,5.31e-08,161;CL:0000071,1.30e-07,18;CL:0002546,1.30e-07,18;CL:0000988,1.53e-07,177;CL:0002078,3.68e-07,45;CL:0000084,4.00e-07,25;CL:0000827,4.00e-07,25;CL:0000860,4.02e-07,42;CL:0002057,4.02e-07,42;CL:0000473,4.59e-07,48;CL:0000234,4.59e-07,48;CL:0000838,8.64e-07,52|ontology_enrichment_development_v019=CL:0000790;1.83e-13;18!CL:0002546;3.14e-07;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003081!1.15e-07!216;UBERON:0004535!1.35e-07!110;UBERON:0001009!2.58e-07!113|ontology_enrichment_uberon_v019=UBERON:0004638;3.14e-07;18!UBERON:0001986;3.14e-07;18!UBERON:0004852;3.14e-07;18|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.30e-07,18;UBERON:0001986,1.30e-07,18;UBERON:0004852,1.30e-07,18;UBERON:0003081,3.57e-07,203|phase1_expression=1.45342703416445,1.2846031433459,0.704772020479856,1.0007329835313,3.12872766099101,1.74467704820074,0,0.631719873426831,0.522371256399677,0.245733936501509,0,0.655324116390517,0.263766978228454,0.495065411840187,0.662794751455832,0,0,0.730310090387373,1.95173119516203,1.47745269692145,1.83600622119828,1.25381888591235,1.71741592278634,1.09499540058307,1.38096903554283,0.382067028739756,0.328402357799783,0.550975469195755,3.14691421479123,3.83829398097213,2.78669021968937,0,0.90361775633475,0,0,0,0.293600439334847,3.32397245119126,4.21143339687298,3.47217393145363,1.56740831967947,1.29557466407592,0.515151135268373,2.18097358169347,2.64513160582167,4.60909716256851,2.09186133215116,5.34518254428373,1.85823822537062,1.1507695692886,2.0492856522328,1.18241114944293,1.03423704220986,1.29096936716765,2.70852973188684,1.31769637679823,1.36453075028923,1.34834090667051,1.83650335422542,1.28371610830437,4.47535988059329,1.64925650093358,1.19678194572979,2.13112375266347,1.16083695451434,0.56738522469114,0,1.50749199154046,1.5644487552606,0.868755378820466,1.21079900526674,2.94622108790052,1.26584954976354,0.845021145247767,0.425208599930087,0.419317291016752,0.673971786878971,0.150176892841506,0.803627933485401,1.99508920618874,1.79025009479181,0.365328307529268,1.75996244461323,2.18455444504853,1.77901850772711,0.426730222566507,2.80277190925209,2.29900975981793,3.96626923670917,1.90810750907073,1.1384259382189,4.11066032559657,2.6759125968766,0,5.60508562981536,0.790152254325231,3.14735632182133,3.14408610199332,2.05601498999509,2.67498392625085,3.58514493296949,3.31413464014313,5.84480185223734,1.6711568532776,2.06224135232386,2.21533894583621,3.79125409271022,1.92136979588513,2.21100890851793,0.493313713811028,0.829050053357545,1.44901542867526,1.4828656316206,2.40786745280742,2.09071047609954,1.81294948316106,1.14966148080576,1.03088233644789,1.77113784413652,4.45991580053735,3.25541726928209,8.55406840003537,2.55977702432214,3.58362511232371,7.49584359314075,2.60454977248419,4.10563998460523,6.04820229674197,8.55808626507223,6.66192257860875,0,0,1.15076305659177,0.722878304769133,1.50401373190767,1.30361867064741,0.795285947051099,0.973269740605272,1.22895262313288,0.665188192387692,1.14185221401064,0.785874452986276,0,0.370784442784429,0.324547393654683,0.522389211897802,0.26591592103773,0.715471872916026,1.71598473234038,0,3.7764857399674,0.860234595106124,2.77712401286075,1.69592382577203,2.09749718104953,2.20094433552054,2.08994966536811,1.55050055501597,1.06729878806013,1.33888245105868,2.41697590265488,3.04108842287405,2.92874469057803,1.10298924103761,3.24056779152704,1.60739510911344,1.79623498100936,1.68917220724983,3.06633274931766,0,2.5648244150257,3.9534125230819,7.75560528296651,0.436094052142534,1.49091585508596,0.379891534993739,1.05927344650575,0.860509862246441,0.354668382198357,0.560677600142307,0,0.98667019366864,0.933633106199299,2.2900814251847,2.12500474047496,0.908144565869588,0,0.234321431833797,1.24864030732128,2.2818872861778,1.04614076386261,0.469737994575059,0.323745888736263,1.2640572603202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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=22821 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20331 | |||
|TSSclassifier=S | |||
|UniProt=B7Z3G9 | |||
|association_with_transcript=17bp_to_ENST00000542651_5end | |||
|description=CAGE_peak_3_at_RASA3_5end | |||
|id=chr13:114897998..114898009,- | |||
|ontology_enrichment_celltype=CL:0000791!1.15e-10!18;CL:0000789!1.15e-10!18;CL:0002420!1.15e-10!18;CL:0002419!1.15e-10!18;CL:0000790!1.15e-10!18;CL:0000625!2.47e-08!11;CL:0000738!5.28e-08!140;CL:0000115!5.88e-08!35;CL:0002087!7.09e-08!119;CL:0002031!3.77e-07!124;CL:0002057!6.66e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.83e-13;18!CL:0000789;1.83e-13;18!CL:0002419;1.83e-13;18!CL:0000625;4.05e-10;11!CL:0000115;1.68e-07;36!CL:0000084;2.12e-07;25!CL:0000071;3.14e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.89e-13,18;CL:0000789,5.89e-13,18;CL:0002420,5.89e-13,18;CL:0002419,5.89e-13,18;CL:0000790,5.89e-13,18;CL:0000738,1.14e-11,136;CL:0002087,6.22e-11,115;CL:0000625,4.85e-10,11;CL:0002031,5.09e-10,120;CL:0000115,2.85e-09,36;CL:0000037,1.48e-08,168;CL:0002032,5.31e-08,161;CL:0000837,5.31e-08,161;CL:0000071,1.30e-07,18;CL:0002546,1.30e-07,18;CL:0000988,1.53e-07,177;CL:0002078,3.68e-07,45;CL:0000084,4.00e-07,25;CL:0000827,4.00e-07,25;CL:0000860,4.02e-07,42;CL:0002057,4.02e-07,42;CL:0000473,4.59e-07,48;CL:0000234,4.59e-07,48;CL:0000838,8.64e-07,52 | |||
|ontology_enrichment_development_v019=CL:0000790;1.83e-13;18!CL:0002546;3.14e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.15e-07!216;UBERON:0004535!1.35e-07!110;UBERON:0001009!2.58e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.14e-07;18!UBERON:0001986;3.14e-07;18!UBERON:0004852;3.14e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.30e-07,18;UBERON:0001986,1.30e-07,18;UBERON:0004852,1.30e-07,18;UBERON:0003081,3.57e-07,203 | |||
|phase1_expression=1.45342703416445,1.2846031433459,0.704772020479856,1.0007329835313,3.12872766099101,1.74467704820074,0,0.631719873426831,0.522371256399677,0.245733936501509,0,0.655324116390517,0.263766978228454,0.495065411840187,0.662794751455832,0,0,0.730310090387373,1.95173119516203,1.47745269692145,1.83600622119828,1.25381888591235,1.71741592278634,1.09499540058307,1.38096903554283,0.382067028739756,0.328402357799783,0.550975469195755,3.14691421479123,3.83829398097213,2.78669021968937,0,0.90361775633475,0,0,0,0.293600439334847,3.32397245119126,4.21143339687298,3.47217393145363,1.56740831967947,1.29557466407592,0.515151135268373,2.18097358169347,2.64513160582167,4.60909716256851,2.09186133215116,5.34518254428373,1.85823822537062,1.1507695692886,2.0492856522328,1.18241114944293,1.03423704220986,1.29096936716765,2.70852973188684,1.31769637679823,1.36453075028923,1.34834090667051,1.83650335422542,1.28371610830437,4.47535988059329,1.64925650093358,1.19678194572979,2.13112375266347,1.16083695451434,0.56738522469114,0,1.50749199154046,1.5644487552606,0.868755378820466,1.21079900526674,2.94622108790052,1.26584954976354,0.845021145247767,0.425208599930087,0.419317291016752,0.673971786878971,0.150176892841506,0.803627933485401,1.99508920618874,1.79025009479181,0.365328307529268,1.75996244461323,2.18455444504853,1.77901850772711,0.426730222566507,2.80277190925209,2.29900975981793,3.96626923670917,1.90810750907073,1.1384259382189,4.11066032559657,2.6759125968766,0,5.60508562981536,0.790152254325231,3.14735632182133,3.14408610199332,2.05601498999509,2.67498392625085,3.58514493296949,3.31413464014313,5.84480185223734,1.6711568532776,2.06224135232386,2.21533894583621,3.79125409271022,1.92136979588513,2.21100890851793,0.493313713811028,0.829050053357545,1.44901542867526,1.4828656316206,2.40786745280742,2.09071047609954,1.81294948316106,1.14966148080576,1.03088233644789,1.77113784413652,4.45991580053735,3.25541726928209,8.55406840003537,2.55977702432214,3.58362511232371,7.49584359314075,2.60454977248419,4.10563998460523,6.04820229674197,8.55808626507223,6.66192257860875,0,0,1.15076305659177,0.722878304769133,1.50401373190767,1.30361867064741,0.795285947051099,0.973269740605272,1.22895262313288,0.665188192387692,1.14185221401064,0.785874452986276,0,0.370784442784429,0.324547393654683,0.522389211897802,0.26591592103773,0.715471872916026,1.71598473234038,0,3.7764857399674,0.860234595106124,2.77712401286075,1.69592382577203,2.09749718104953,2.20094433552054,2.08994966536811,1.55050055501597,1.06729878806013,1.33888245105868,2.41697590265488,3.04108842287405,2.92874469057803,1.10298924103761,3.24056779152704,1.60739510911344,1.79623498100936,1.68917220724983,3.06633274931766,0,2.5648244150257,3.9534125230819,7.75560528296651,0.436094052142534,1.49091585508596,0.379891534993739,1.05927344650575,0.860509862246441,0.354668382198357,0.560677600142307,0,0.98667019366864,0.933633106199299,2.2900814251847,2.12500474047496,0.908144565869588,0,0.234321431833797,1.24864030732128,2.2818872861778,1.04614076386261,0.469737994575059,0.323745888736263,1.26405726032024,0.61246251376468,0.859840221182376,0.723280468230358,0,0.989067717114227,1.82032272387605,0.718618141816238,0.505008341862199,0.750711119231785,0.831192346452549,0.877955241761676,0,1.65261864797256,0.680593098960126,1.4351170855109,0.85422955527427,0.847727604638247,0.600182192168805,1.75189299705346,1.28820270022815,1.67505170698431,1.0126579934476,0.779496041289589,2.27190396819703,1.10459878370759,2.58633690910099,1.06502877754984,0.906768884048762,0.339121184620975,0.773043412653187,0.545492241181669,0,0.487894824518382,0.662648841607426,0.348581828608555,0.518305275076852,0,0.72995471815166,3.12899064659632,1.28648187638577,2.76269842704961,0.928735856063958,0,0,0.337169380156203,0,0,0,0,0.134831308160164,0,0,5.16708818237254,1.40241773803446,2.057870056657,1.47008711385542,0,0,0.590789906681404,0,0,0.514703430895577,0.219500570817251,0,0.201057944823262,0.277765335475589,0.977424915930974,1.03993478527958,0,0.695582429850461,0.587043471179108,0.577465791044295,0.925971025153221,0.380508304469197,0,0,0.492434012174795,1.17002132569619,1.48631162288728,0,0.671928512795438,0.283550194484773,0.0895585227028483,0.581267877027924,0.383382679165211,0.985326475791887,1.49682337822484,2.07328115540772,2.59415916150531,3.1560608356595,1.14296209725904,1.90994212779139,2.34434894420094,6.84289784090821,0.925447434329912,0.600686115687835,1.71495859578347,1.12131084345361,0.43596006883328,0.66004457238855,0.904902010304444,0,1.690605505112,0.797814349754612,1.04007436911366,0.514414748524284,1.41849132023278,0.799266537048298,1.28680194292333,1.08524321078289,0,1.30294473717494,1.06617584622764,0,0.602878754119172,1.74306691720059,1.49959486773086,1.2162378064119,1.50677127429638,0,1.91699884393266,0,0,0.289562613335158,0.205476322550383,0.895304816199478,1.45710687191585,6.89607660706745,4.9594342217689,7.05886699538616,1.52456774533478,1.30139853857622,2.31986643833309,0.50254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| |||
|short_description=p3@RASA3 | |||
}} |
Revision as of 01:40, 11 September 2013
Short description: | p3@RASA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_RASA3_5end |
Coexpression cluster: | NA |
Association with transcript: | 17bp_to_ENST00000542651_5end |
EntrezGene: | RASA3 |
HGNC: | 20331 |
UniProt: | B7Z3G9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.89e-13 | 18 |
alpha-beta T cell | 5.89e-13 | 18 |
immature T cell | 5.89e-13 | 18 |
mature T cell | 5.89e-13 | 18 |
immature alpha-beta T cell | 5.89e-13 | 18 |
leukocyte | 1.14e-11 | 136 |
nongranular leukocyte | 6.22e-11 | 115 |
CD8-positive, alpha-beta T cell | 4.85e-10 | 11 |
hematopoietic lineage restricted progenitor cell | 5.09e-10 | 120 |
endothelial cell | 2.85e-09 | 36 |
hematopoietic stem cell | 1.48e-08 | 168 |
hematopoietic oligopotent progenitor cell | 5.31e-08 | 161 |
hematopoietic multipotent progenitor cell | 5.31e-08 | 161 |
blood vessel endothelial cell | 1.30e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.30e-07 | 18 |
hematopoietic cell | 1.53e-07 | 177 |
meso-epithelial cell | 3.68e-07 | 45 |
T cell | 4.00e-07 | 25 |
pro-T cell | 4.00e-07 | 25 |
classical monocyte | 4.02e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.02e-07 | 42 |
defensive cell | 4.59e-07 | 48 |
phagocyte | 4.59e-07 | 48 |
lymphoid lineage restricted progenitor cell | 8.64e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.30e-07 | 18 |
endothelium | 1.30e-07 | 18 |
cardiovascular system endothelium | 1.30e-07 | 18 |
lateral plate mesoderm | 3.57e-07 | 203 |
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