FFCP PHASE1:Hg19::chr14:39644079..39644088,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5411|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9162|TSSclassifier=S|UniProt=G3V579,Q9H307|association_with_transcript=-298bp_to_ENST00000553331,NM_002687,uc001wuw.3_5end|coexpression_cluster_id=C55|description=CAGE_peak_41_at_PNN_5end|id=chr14:39644079..39644088,+|ontology_enrichment_celltype=CL:0000181!3.64e-16!12;CL:0000417!3.64e-16!12;CL:0000668!3.64e-16!12;CL:0000414!3.64e-16!12;CL:0000412!3.64e-16!12;CL:0000182!3.64e-16!12;CL:0002563!1.16e-12!4;CL:0000223!3.30e-09!59;CL:0002253!4.42e-07!2|ontology_enrichment_celltype_v019=CL:0000182;5.59e-50;12|ontology_enrichment_celltype_v019_2=CL:0000182,5.59e-50,12;CL:0000223,2.67e-11,58|ontology_enrichment_development_v019=UBERON:0004161;2.16e-54;11!UBERON:0009497;3.04e-46;13!UBERON:0001041;8.87e-21;30!UBERON:0003104;1.08e-19;31!CL:0000223;9.26e-08;58|ontology_enrichment_disease=DOID:7!1.66e-07!39|ontology_enrichment_disease_v019=DOID:7;7.13e-17;39|ontology_enrichment_disease_v019_2=DOID:7,2.93e-16,39|ontology_enrichment_uberon=UBERON:0008835!2.23e-13!22;UBERON:0003894!2.23e-13!22;UBERON:0003929!4.29e-13!54;UBERON:0009854!8.57e-13!23;UBERON:0001052!9.76e-13!4;UBERON:0001242!1.16e-12!4;UBERON:0001262!1.16e-12!4;UBERON:0004786!1.16e-12!4;UBERON:0004808!1.16e-12!4;UBERON:0001277!1.16e-12!4;UBERON:0007499!9.14e-12!25;UBERON:0009497!9.14e-12!25;UBERON:0000015!9.14e-12!25;UBERON:0002423!9.14e-12!25;UBERON:0006235!9.14e-12!25;UBERON:0004161!9.14e-12!25;UBERON:0009856!2.61e-11!26;UBERON:0005911!1.54e-10!82;UBERON:0004907!2.25e-10!5;UBERON:0003350!2.59e-10!5;UBERON:0002107!2.66e-10!19;UBERON:0006925!2.66e-10!19;UBERON:0008836!2.66e-10!19;UBERON:0004921!1.82e-09!129;UBERON:0004185!1.82e-09!129;UBERON:0001007!1.23e-07!155;UBERON:0001555!1.23e-07!155;UBERON:0007026!1.23e-07!155;UBERON:0005057!1.41e-07!26;UBERON:0000160!6.58e-07!27;UBERON:0004119!7.02e-07!169;UBERON:0000925!7.02e-07!169;UBERON:0006595!7.02e-07!169|ontology_enrichment_uberon_v019=UBERON:0002107;4.52e-32;19!UBERON:0006925;4.52e-32;19!UBERON:0002423;1.10e-24;25!UBERON:0002365;1.31e-18;31!UBERON:0002330;1.31e-18;31!UBERON:0002368;1.59e-17;33!UBERON:0000949;1.28e-13;43!UBERON:0002530;5.60e-08;57!UBERON:0002417;1.64e-07;58!UBERON:0000916;1.64e-07;58|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.52e-32,19;UBERON:0006925,4.52e-32,19;UBERON:0008836,4.52e-32,19;UBERON:0008835,7.08e-28,22;UBERON:0003894,7.08e-28,22;UBERON:0009854,1.01e-26,23;UBERON:0007499,1.10e-24,25;UBERON:0009497,1.10e-24,25;UBERON:0000015,1.10e-24,25;UBERON:0002423,1.10e-24,25;UBERON:0006235,1.10e-24,25;UBERON:0004161,1.10e-24,25;UBERON:0009856,8.76e-24,26;UBERON:0002365,3.79e-20,31;UBERON:0002330,3.79e-20,31;UBERON:0002368,5.55e-18,35;UBERON:0000949,3.03e-14,45;UBERON:0003929,4.68e-12,54;UBERON:0005172,4.68e-12,54;UBERON:0005173,4.68e-12,54;UBERON:0002530,3.99e-11,59;UBERON:0002417,5.86e-11,60;UBERON:0000916,5.86e-11,60;UBERON:0005911,2.70e-08,82;UBERON:0001041,7.10e-08,87;UBERON:0005177,6.45e-07,101|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0.393553906568396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3393140992228,1.7307330260045,1.61768505250044,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840816489941367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p41@PNN}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5411 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9162 | |||
|TSSclassifier=S | |||
|UniProt=G3V579,Q9H307 | |||
|association_with_transcript=-298bp_to_ENST00000553331,NM_002687,uc001wuw.3_5end | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_41_at_PNN_5end | |||
|id=chr14:39644079..39644088,+ | |||
|ontology_enrichment_celltype=CL:0000181!3.64e-16!12;CL:0000417!3.64e-16!12;CL:0000668!3.64e-16!12;CL:0000414!3.64e-16!12;CL:0000412!3.64e-16!12;CL:0000182!3.64e-16!12;CL:0002563!1.16e-12!4;CL:0000223!3.30e-09!59;CL:0002253!4.42e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.59e-50;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.59e-50,12;CL:0000223,2.67e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.16e-54;11!UBERON:0009497;3.04e-46;13!UBERON:0001041;8.87e-21;30!UBERON:0003104;1.08e-19;31!CL:0000223;9.26e-08;58 | |||
|ontology_enrichment_disease=DOID:7!1.66e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:7;7.13e-17;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,2.93e-16,39 | |||
|ontology_enrichment_uberon=UBERON:0008835!2.23e-13!22;UBERON:0003894!2.23e-13!22;UBERON:0003929!4.29e-13!54;UBERON:0009854!8.57e-13!23;UBERON:0001052!9.76e-13!4;UBERON:0001242!1.16e-12!4;UBERON:0001262!1.16e-12!4;UBERON:0004786!1.16e-12!4;UBERON:0004808!1.16e-12!4;UBERON:0001277!1.16e-12!4;UBERON:0007499!9.14e-12!25;UBERON:0009497!9.14e-12!25;UBERON:0000015!9.14e-12!25;UBERON:0002423!9.14e-12!25;UBERON:0006235!9.14e-12!25;UBERON:0004161!9.14e-12!25;UBERON:0009856!2.61e-11!26;UBERON:0005911!1.54e-10!82;UBERON:0004907!2.25e-10!5;UBERON:0003350!2.59e-10!5;UBERON:0002107!2.66e-10!19;UBERON:0006925!2.66e-10!19;UBERON:0008836!2.66e-10!19;UBERON:0004921!1.82e-09!129;UBERON:0004185!1.82e-09!129;UBERON:0001007!1.23e-07!155;UBERON:0001555!1.23e-07!155;UBERON:0007026!1.23e-07!155;UBERON:0005057!1.41e-07!26;UBERON:0000160!6.58e-07!27;UBERON:0004119!7.02e-07!169;UBERON:0000925!7.02e-07!169;UBERON:0006595!7.02e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.52e-32;19!UBERON:0006925;4.52e-32;19!UBERON:0002423;1.10e-24;25!UBERON:0002365;1.31e-18;31!UBERON:0002330;1.31e-18;31!UBERON:0002368;1.59e-17;33!UBERON:0000949;1.28e-13;43!UBERON:0002530;5.60e-08;57!UBERON:0002417;1.64e-07;58!UBERON:0000916;1.64e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.52e-32,19;UBERON:0006925,4.52e-32,19;UBERON:0008836,4.52e-32,19;UBERON:0008835,7.08e-28,22;UBERON:0003894,7.08e-28,22;UBERON:0009854,1.01e-26,23;UBERON:0007499,1.10e-24,25;UBERON:0009497,1.10e-24,25;UBERON:0000015,1.10e-24,25;UBERON:0002423,1.10e-24,25;UBERON:0006235,1.10e-24,25;UBERON:0004161,1.10e-24,25;UBERON:0009856,8.76e-24,26;UBERON:0002365,3.79e-20,31;UBERON:0002330,3.79e-20,31;UBERON:0002368,5.55e-18,35;UBERON:0000949,3.03e-14,45;UBERON:0003929,4.68e-12,54;UBERON:0005172,4.68e-12,54;UBERON:0005173,4.68e-12,54;UBERON:0002530,3.99e-11,59;UBERON:0002417,5.86e-11,60;UBERON:0000916,5.86e-11,60;UBERON:0005911,2.70e-08,82;UBERON:0001041,7.10e-08,87;UBERON:0005177,6.45e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0.393553906568396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3393140992228,1.7307330260045,1.61768505250044,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840816489941367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p41@PNN | |||
}} |
Revision as of 04:32, 11 September 2013
Short description: | p41@PNN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_41_at_PNN_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | -298bp_to_ENST00000553331, NM_002687, uc001wuw.3_5end |
EntrezGene: | PNN |
HGNC: | 9162 |
UniProt: | G3V579Q9H307 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.59e-50 | 12 |
endodermal cell | 2.67e-11 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 4.52e-32 | 19 |
digestive gland | 4.52e-32 | 19 |
liver bud | 4.52e-32 | 19 |
hepatic diverticulum | 7.08e-28 | 22 |
liver primordium | 7.08e-28 | 22 |
digestive tract diverticulum | 1.01e-26 | 23 |
epithelial sac | 1.10e-24 | 25 |
epithelium of foregut-midgut junction | 1.10e-24 | 25 |
anatomical boundary | 1.10e-24 | 25 |
hepatobiliary system | 1.10e-24 | 25 |
foregut-midgut junction | 1.10e-24 | 25 |
septum transversum | 1.10e-24 | 25 |
sac | 8.76e-24 | 26 |
exocrine gland | 3.79e-20 | 31 |
exocrine system | 3.79e-20 | 31 |
endocrine gland | 5.55e-18 | 35 |
endocrine system | 3.03e-14 | 45 |
gut epithelium | 4.68e-12 | 54 |
abdomen element | 4.68e-12 | 54 |
abdominal segment element | 4.68e-12 | 54 |
gland | 3.99e-11 | 59 |
abdominal segment of trunk | 5.86e-11 | 60 |
abdomen | 5.86e-11 | 60 |
endo-epithelium | 2.70e-08 | 82 |
foregut | 7.10e-08 | 87 |
trunk region element | 6.45e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 2.93e-16 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.