FFCP PHASE1:Hg19::chr14:75083294..75083305,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=9bp_to_ENST00000556652_5end|description=CAGE_peak_2_at_ENST00000556652_5end|id=chr14:75083294..75083305,-|ontology_enrichment_celltype=CL:0000220!1.11e-12!246;CL:0002321!2.04e-12!248;CL:0000359!1.27e-10!32;CL:0002371!1.53e-09!591;CL:0000144!4.12e-09!625;CL:0000071!1.03e-08!18;CL:0002546!1.03e-08!18;CL:0000548!1.18e-08!679;CL:0000004!1.18e-08!679;CL:0000255!1.18e-08!679;CL:0002159!1.40e-08!13;CL:0000012!1.87e-08!682;CL:0002139!4.23e-08!24;CL:0000222!1.27e-07!119;CL:0000066!1.76e-07!254;CL:0000244!3.44e-07!4;CL:0000731!3.44e-07!4;CL:1000413!4.12e-07!9;CL:0000192!6.67e-07!42;CL:0000514!6.67e-07!42;CL:0002057!7.57e-07!42;CL:0002368!8.17e-07!13|ontology_enrichment_celltype_v019=CL:0002621;4.18e-17;3!CL:0000244;2.76e-12;4!CL:0000731;2.76e-12;4!CL:0002589;2.22e-11;2!CL:0000359;5.40e-11;32!CL:0002368;3.10e-10;13!CL:0002595;6.28e-10;5!CL:0002202;1.01e-09;9!CL:0002632;1.01e-09;9!CL:0002166;1.75e-08;3!CL:0000307;4.23e-08;3!CL:0000192;1.47e-07;43|ontology_enrichment_celltype_v019_2=CL:0002621,2.07e-17,3;CL:0000244,1.31e-12,4;CL:0000731,1.31e-12,4;CL:0000359,1.53e-11,32;CL:0002589,2.35e-11,2;CL:0002368,3.68e-10,13;CL:0002202,1.19e-09,9;CL:0002632,1.19e-09,9;CL:0002595,1.20e-09,5;CL:0002166,1.72e-08,3;CL:0000192,3.24e-08,43;CL:0000514,3.24e-08,43;CL:0000068,4.72e-08,3;CL:0000069,4.72e-08,3;CL:0000307,4.72e-08,3;CL:0000377,4.72e-08,3;CL:0002076,4.42e-07,42;CL:0002321,5.23e-07,250|ontology_enrichment_development_v019=CL:0000377;4.23e-08;3!CL:0000514;1.47e-07;43|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001981!5.82e-18!60;UBERON:0007500!5.82e-18!60;UBERON:0004537!5.82e-18!60;UBERON:0006965!5.82e-18!60;UBERON:0001637!6.50e-18!42;UBERON:0003509!6.50e-18!42;UBERON:0004572!6.50e-18!42;UBERON:0002049!5.63e-17!79;UBERON:0007798!5.63e-17!79;UBERON:0000055!1.90e-16!69;UBERON:0004573!3.21e-16!33;UBERON:0004571!3.21e-16!33;UBERON:0004872!2.58e-13!84;UBERON:0004535!1.54e-12!110;UBERON:0001009!7.07e-12!113;UBERON:0000947!3.28e-10!21;UBERON:0010191!3.28e-10!21;UBERON:0003914!1.37e-09!118;UBERON:0000490!6.67e-09!138;UBERON:0001986!1.03e-08!18;UBERON:0004638!1.03e-08!18;UBERON:0004852!1.03e-08!18;UBERON:0007625!2.33e-08!11;UBERON:0003081!2.34e-08!216;UBERON:0000467!3.16e-08!625;UBERON:0000480!3.68e-08!626;UBERON:0000487!4.51e-08!22;UBERON:0000923!6.18e-08!604;UBERON:0005291!6.18e-08!604;UBERON:0006598!6.18e-08!604;UBERON:0002532!6.18e-08!604;UBERON:0002050!7.18e-08!605;UBERON:0005423!7.18e-08!605;UBERON:0000486!8.32e-08!82;UBERON:0000922!8.62e-08!612;UBERON:0001801!9.07e-08!14;UBERON:0000365!9.12e-08!5;UBERON:0003915!4.12e-07!9;UBERON:0004700!4.12e-07!9;UBERON:0001917!4.12e-07!9;UBERON:0000119!7.08e-07!312;UBERON:0000483!8.92e-07!309|ontology_enrichment_uberon_v019=UBERON:0001949;4.18e-17;3!UBERON:0000486;1.69e-15;12!UBERON:0003513;4.39e-12;7!UBERON:0004573;9.61e-12;33!UBERON:0004571;9.61e-12;33!UBERON:0001529;2.22e-11;2!UBERON:0007204;2.22e-11;2!UBERON:0003834;6.28e-10;5!UBERON:0000365;6.28e-10;5!UBERON:0001533;6.28e-10;5!UBERON:0001637;4.83e-09;42!UBERON:0003509;4.83e-09;42!UBERON:0004572;4.83e-09;42!UBERON:0005910;2.38e-08;6!UBERON:0010371;6.22e-08;31!UBERON:0005911;7.18e-08;36!UBERON:0003929;1.36e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0001949,2.07e-17,3;UBERON:0004573,7.27e-14,33;UBERON:0004571,7.27e-14,33;UBERON:0000486,9.47e-13,83;UBERON:0003513,7.91e-12,7;UBERON:0001529,2.35e-11,2;UBERON:0007204,2.35e-11,2;UBERON:0001637,1.63e-10,42;UBERON:0003509,1.63e-10,42;UBERON:0004572,1.63e-10,42;UBERON:0007500,3.01e-10,59;UBERON:0001981,3.01e-10,59;UBERON:0004537,3.01e-10,59;UBERON:0006965,3.01e-10,59;UBERON:0000365,3.48e-10,5;UBERON:0003834,1.20e-09,5;UBERON:0001533,1.20e-09,5;UBERON:0000055,1.37e-08,68;UBERON:0005910,1.46e-08,6;UBERON:0002049,3.33e-07,78;UBERON:0007798,3.33e-07,78;UBERON:0003350,8.38e-07,8;UBERON:0001828,8.38e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,1.204823675113,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0.377875943688809,1.21292030593908,0,0,0.619412741790207,0.28769239232215,0.768482119587302,0.47296445977717,0.344745680736619,0.645484683583826,0,0,0.272906150057846,0.224723484445085,0,0,0,0.329851300186716,0.199463657621632,0.426224750532694,0.870627715885752,0.56738522469114,1.24564449799115,0.502497330513487,1.0429658368404,0.868755378820466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.443458794925128,0.263504357079378,0,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0.79504962946682,1.72046919021225,0,0.56530794192401,0.838998872419812,0.275118041940067,0.417989933073621,0.516833518338658,0,0.33472061276467,0,0.760272105718513,0,0,0.81014194788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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=9bp_to_ENST00000556652_5end | |||
|description=CAGE_peak_2_at_ENST00000556652_5end | |||
|id=chr14:75083294..75083305,- | |||
|ontology_enrichment_celltype=CL:0000220!1.11e-12!246;CL:0002321!2.04e-12!248;CL:0000359!1.27e-10!32;CL:0002371!1.53e-09!591;CL:0000144!4.12e-09!625;CL:0000071!1.03e-08!18;CL:0002546!1.03e-08!18;CL:0000548!1.18e-08!679;CL:0000004!1.18e-08!679;CL:0000255!1.18e-08!679;CL:0002159!1.40e-08!13;CL:0000012!1.87e-08!682;CL:0002139!4.23e-08!24;CL:0000222!1.27e-07!119;CL:0000066!1.76e-07!254;CL:0000244!3.44e-07!4;CL:0000731!3.44e-07!4;CL:1000413!4.12e-07!9;CL:0000192!6.67e-07!42;CL:0000514!6.67e-07!42;CL:0002057!7.57e-07!42;CL:0002368!8.17e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002621;4.18e-17;3!CL:0000244;2.76e-12;4!CL:0000731;2.76e-12;4!CL:0002589;2.22e-11;2!CL:0000359;5.40e-11;32!CL:0002368;3.10e-10;13!CL:0002595;6.28e-10;5!CL:0002202;1.01e-09;9!CL:0002632;1.01e-09;9!CL:0002166;1.75e-08;3!CL:0000307;4.23e-08;3!CL:0000192;1.47e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,2.07e-17,3;CL:0000244,1.31e-12,4;CL:0000731,1.31e-12,4;CL:0000359,1.53e-11,32;CL:0002589,2.35e-11,2;CL:0002368,3.68e-10,13;CL:0002202,1.19e-09,9;CL:0002632,1.19e-09,9;CL:0002595,1.20e-09,5;CL:0002166,1.72e-08,3;CL:0000192,3.24e-08,43;CL:0000514,3.24e-08,43;CL:0000068,4.72e-08,3;CL:0000069,4.72e-08,3;CL:0000307,4.72e-08,3;CL:0000377,4.72e-08,3;CL:0002076,4.42e-07,42;CL:0002321,5.23e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000377;4.23e-08;3!CL:0000514;1.47e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001981!5.82e-18!60;UBERON:0007500!5.82e-18!60;UBERON:0004537!5.82e-18!60;UBERON:0006965!5.82e-18!60;UBERON:0001637!6.50e-18!42;UBERON:0003509!6.50e-18!42;UBERON:0004572!6.50e-18!42;UBERON:0002049!5.63e-17!79;UBERON:0007798!5.63e-17!79;UBERON:0000055!1.90e-16!69;UBERON:0004573!3.21e-16!33;UBERON:0004571!3.21e-16!33;UBERON:0004872!2.58e-13!84;UBERON:0004535!1.54e-12!110;UBERON:0001009!7.07e-12!113;UBERON:0000947!3.28e-10!21;UBERON:0010191!3.28e-10!21;UBERON:0003914!1.37e-09!118;UBERON:0000490!6.67e-09!138;UBERON:0001986!1.03e-08!18;UBERON:0004638!1.03e-08!18;UBERON:0004852!1.03e-08!18;UBERON:0007625!2.33e-08!11;UBERON:0003081!2.34e-08!216;UBERON:0000467!3.16e-08!625;UBERON:0000480!3.68e-08!626;UBERON:0000487!4.51e-08!22;UBERON:0000923!6.18e-08!604;UBERON:0005291!6.18e-08!604;UBERON:0006598!6.18e-08!604;UBERON:0002532!6.18e-08!604;UBERON:0002050!7.18e-08!605;UBERON:0005423!7.18e-08!605;UBERON:0000486!8.32e-08!82;UBERON:0000922!8.62e-08!612;UBERON:0001801!9.07e-08!14;UBERON:0000365!9.12e-08!5;UBERON:0003915!4.12e-07!9;UBERON:0004700!4.12e-07!9;UBERON:0001917!4.12e-07!9;UBERON:0000119!7.08e-07!312;UBERON:0000483!8.92e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;4.18e-17;3!UBERON:0000486;1.69e-15;12!UBERON:0003513;4.39e-12;7!UBERON:0004573;9.61e-12;33!UBERON:0004571;9.61e-12;33!UBERON:0001529;2.22e-11;2!UBERON:0007204;2.22e-11;2!UBERON:0003834;6.28e-10;5!UBERON:0000365;6.28e-10;5!UBERON:0001533;6.28e-10;5!UBERON:0001637;4.83e-09;42!UBERON:0003509;4.83e-09;42!UBERON:0004572;4.83e-09;42!UBERON:0005910;2.38e-08;6!UBERON:0010371;6.22e-08;31!UBERON:0005911;7.18e-08;36!UBERON:0003929;1.36e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,2.07e-17,3;UBERON:0004573,7.27e-14,33;UBERON:0004571,7.27e-14,33;UBERON:0000486,9.47e-13,83;UBERON:0003513,7.91e-12,7;UBERON:0001529,2.35e-11,2;UBERON:0007204,2.35e-11,2;UBERON:0001637,1.63e-10,42;UBERON:0003509,1.63e-10,42;UBERON:0004572,1.63e-10,42;UBERON:0007500,3.01e-10,59;UBERON:0001981,3.01e-10,59;UBERON:0004537,3.01e-10,59;UBERON:0006965,3.01e-10,59;UBERON:0000365,3.48e-10,5;UBERON:0003834,1.20e-09,5;UBERON:0001533,1.20e-09,5;UBERON:0000055,1.37e-08,68;UBERON:0005910,1.46e-08,6;UBERON:0002049,3.33e-07,78;UBERON:0007798,3.33e-07,78;UBERON:0003350,8.38e-07,8;UBERON:0001828,8.38e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,1.204823675113,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0.377875943688809,1.21292030593908,0,0,0.619412741790207,0.28769239232215,0.768482119587302,0.47296445977717,0.344745680736619,0.645484683583826,0,0,0.272906150057846,0.224723484445085,0,0,0,0.329851300186716,0.199463657621632,0.426224750532694,0.870627715885752,0.56738522469114,1.24564449799115,0.502497330513487,1.0429658368404,0.868755378820466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.443458794925128,0.263504357079378,0,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0.79504962946682,1.72046919021225,0,0.56530794192401,0.838998872419812,0.275118041940067,0.417989933073621,0.516833518338658,0,0.33472061276467,0,0.760272105718513,0,0,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0.949265659568129,1.46561395144326,0,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0,0,0,0,0,0.404132016209064,0.163461903113459,0,0,0,0,1.71141546463335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73934767846967,3.81844568827169,3.15485054927904,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.857839051492628,5.70701484124853,0,0.603173834469785,0.277765335475589,0,0,4.3299402607582,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0.297262324577456,0.93733833986777,5.54341023056236,2.69372684760534,0,0.871901815541886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.532685175939381,0.0821271560138091,0,0,0,0.40101294060657,0,0,0,0,0,0.15403067420883,0,0,0,0,0.510281115829547,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0,0,0,4.59412430396938,0.650060246036521,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0.960950336825531,3.06270509987002,0,0.464845549297286,1.5740617341532,0.6970372701606,1.23213432070436,1.59691809095107,0.869932992075073,1.66791797193528,1.14499909393593,0,0,0,0,0,0,0,0,0,0,0.808729926293264,1.58510321173008,0,0,0,1.05650146756755,0,0,0,1.10273068709225,1.32687795048244,0.876901770507525,0,0,0,0.30982349809975,0,0.143411352204052,0,0.35667105148125,0,0,0,0,0,0.577332676353072,1.34060455107157,2.17781969722645,0,1.72202149068492,1.68471475667626,0.886860307073351,1.37834040124176,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.84136146806413,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971121518136371,0,0,0,0,0,0,2.65861549082874,0.661983911750998,0,3.58417289318877,0,0.416024019039416,0,0,0,0,0.171986032471617,0,0,0,0,0.794305140223502,0,0.822251547880505,1.58971689362392,0,0,0,0,0,0,0,0,0,0.248505071130865,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76280561296425,0,0.864221491201268,0.326587360109409,1.19730191562487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74988244777264,0,0,0,0,0,0,0.233713309847224,0.554805861502613,0,0,0,0,0,0.310874401165561,0.591420599958536,0.477890301491107,0.449803112163605,0.465788870628778,0,0.265841714557995,0,0,0,0.406870733204662,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0.358177682162975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0.381382095467167,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828324005113957,0.766920642832419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,2.47026410200984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@ENST00000556652 | |||
}} |
Revision as of 05:32, 11 September 2013
Short description: | p2@ENST00000556652 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENST00000556652_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_ENST00000556652_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 2.07e-17 | 3 |
transitional epithelial cell | 1.31e-12 | 4 |
urothelial cell | 1.31e-12 | 4 |
vascular associated smooth muscle cell | 1.53e-11 | 32 |
smooth muscle cell of the brachiocephalic vasculature | 2.35e-11 | 2 |
respiratory epithelial cell | 3.68e-10 | 13 |
epithelial cell of tracheobronchial tree | 1.19e-09 | 9 |
epithelial cell of lower respiratory tract | 1.19e-09 | 9 |
smooth muscle cell of the subclavian artery | 1.20e-09 | 5 |
epithelial cell of Malassez | 1.72e-08 | 3 |
smooth muscle cell | 3.24e-08 | 43 |
smooth muscle myoblast | 3.24e-08 | 43 |
duct epithelial cell | 4.72e-08 | 3 |
branched duct epithelial cell | 4.72e-08 | 3 |
tracheal epithelial cell | 4.72e-08 | 3 |
tracheoblast | 4.72e-08 | 3 |
endo-epithelial cell | 4.42e-07 | 42 |
embryonic cell | 5.23e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 2.07e-17 | 3 |
systemic artery | 7.27e-14 | 33 |
systemic arterial system | 7.27e-14 | 33 |
multilaminar epithelium | 9.47e-13 | 83 |
trunk blood vessel | 7.91e-12 | 7 |
brachiocephalic artery | 2.35e-11 | 2 |
brachiocephalic vasculature | 2.35e-11 | 2 |
artery | 1.63e-10 | 42 |
arterial blood vessel | 1.63e-10 | 42 |
arterial system | 1.63e-10 | 42 |
epithelial tube open at both ends | 3.01e-10 | 59 |
blood vessel | 3.01e-10 | 59 |
blood vasculature | 3.01e-10 | 59 |
vascular cord | 3.01e-10 | 59 |
urothelium | 3.48e-10 | 5 |
thoracic segment blood vessel | 1.20e-09 | 5 |
subclavian artery | 1.20e-09 | 5 |
vessel | 1.37e-08 | 68 |
transitional epithelium | 1.46e-08 | 6 |
vasculature | 3.33e-07 | 78 |
vascular system | 3.33e-07 | 78 |
epithelium of mucosa | 8.38e-07 | 8 |
gingiva | 8.38e-07 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.