FFCP PHASE1:Hg19::chr16:68014387..68014423,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64180|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23029|TSSclassifier=S|UniProt=Q9H4B8|association_with_transcript=28bp_to_NM_001129758,NM_022357,uc002evc.3,uc010cex.2_5end|coexpression_cluster_id=C158|description=CAGE_peak_1_at_DPEP3_5end|id=chr16:68014387..68014423,-|ontology_enrichment_celltype=CL:0002322!5.01e-14!5;CL:0000039!1.66e-12!7;CL:0000586!1.66e-12!7;CL:0002274!2.88e-08!5;CL:0000457!2.88e-08!5;CL:0002191!2.88e-08!5;CL:0000097!2.88e-08!5;CL:0000831!2.88e-08!5;CL:0002028!2.88e-08!5|ontology_enrichment_celltype_v019=CL:0002322;4.33e-58;5!CL:0002321;1.93e-19;15!CL:0000037;9.73e-13;1!CL:0001024;9.73e-13;1!CL:0000148;3.88e-11;10!CL:0000147;4.16e-08;14!CL:0000039;1.38e-07;7!CL:0000586;1.38e-07;7|ontology_enrichment_celltype_v019_2=CL:0002322,6.18e-58,5;CL:0001024,9.73e-13,1;CL:0000148,4.02e-11,10;CL:0000541,4.02e-11,10;CL:0000147,4.27e-08,14;CL:0000039,1.43e-07,7;CL:0000586,1.43e-07,7|ontology_enrichment_development_v019=UBERON:0009117;3.25e-19;10!UBERON:0005564;3.25e-19;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!6.88e-25!115;UBERON:0001049!7.81e-17!57;UBERON:0005068!7.81e-17!57;UBERON:0006241!7.81e-17!57;UBERON:0007135!7.81e-17!57;UBERON:0005743!1.23e-14!86;UBERON:0002616!2.20e-14!59;UBERON:0001017!2.25e-14!82;UBERON:0001893!7.21e-13!34;UBERON:0000073!1.39e-12!94;UBERON:0001016!1.39e-12!94;UBERON:0000955!1.77e-12!69;UBERON:0006238!1.77e-12!69;UBERON:0001869!5.04e-12!32;UBERON:0002791!1.31e-11!33;UBERON:0003075!2.11e-11!86;UBERON:0007284!2.11e-11!86;UBERON:0003080!2.56e-11!42;UBERON:0002020!3.95e-11!34;UBERON:0003528!3.95e-11!34;UBERON:0002346!1.29e-10!90;UBERON:0002780!4.38e-10!41;UBERON:0001890!4.38e-10!41;UBERON:0006240!4.38e-10!41;UBERON:0002619!1.05e-09!22;UBERON:0001950!6.56e-09!20;UBERON:0000956!2.52e-08!25;UBERON:0000203!2.52e-08!25;UBERON:0000473!2.99e-08!8;UBERON:0001896!8.32e-08!3;UBERON:0005290!8.32e-08!3;UBERON:0010096!8.32e-08!3;UBERON:0003056!1.21e-07!61;UBERON:0002298!2.17e-07!8;UBERON:0000153!2.80e-07!129;UBERON:0007811!2.80e-07!129;UBERON:0000033!3.00e-07!123;UBERON:0003076!5.28e-07!15;UBERON:0003057!5.28e-07!15|ontology_enrichment_uberon_v019=UBERON:0000473;6.26e-24;8!UBERON:0003135;1.70e-17;11!UBERON:0000991;2.78e-09;21!UBERON:0003101;7.19e-09;22!UBERON:0000079;7.19e-09;22!UBERON:0000922;6.19e-07;49|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.64e-24,8;UBERON:0003135,1.77e-17,11;UBERON:0000991,2.84e-09,21;UBERON:0009196,2.84e-09,21;UBERON:0009117,2.84e-09,21;UBERON:0005564,2.84e-09,21;UBERON:0004176,7.34e-09,22;UBERON:0003101,7.34e-09,22;UBERON:0000079,7.34e-09,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,1.17440175733939,0,0,0,0,1.6194683300949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0.560508562981536,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.0751124186843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31842236777572,2.12047629314376,3.36962434321603,2.28054321033815,3.5324919122588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,2.46535615237033,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.6080032699227,0,0,0,0,2.54004524022652,0,0,0,0,0,0,0,154.73466523063,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0,0,0,0.0769502585037971,0,0.46112780877612,0.359030577639089,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0.964518890790115,0,0,0,0,0.364497339948148,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0.5013797880454,0,0,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.221858103073705,0.0620964029413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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64180 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23029 | |||
|TSSclassifier=S | |||
|UniProt=Q9H4B8 | |||
|association_with_transcript=28bp_to_NM_001129758,NM_022357,uc002evc.3,uc010cex.2_5end | |||
|coexpression_cluster_id=C158 | |||
|description=CAGE_peak_1_at_DPEP3_5end | |||
|id=chr16:68014387..68014423,- | |||
|ontology_enrichment_celltype=CL:0002322!5.01e-14!5;CL:0000039!1.66e-12!7;CL:0000586!1.66e-12!7;CL:0002274!2.88e-08!5;CL:0000457!2.88e-08!5;CL:0002191!2.88e-08!5;CL:0000097!2.88e-08!5;CL:0000831!2.88e-08!5;CL:0002028!2.88e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;4.33e-58;5!CL:0002321;1.93e-19;15!CL:0000037;9.73e-13;1!CL:0001024;9.73e-13;1!CL:0000148;3.88e-11;10!CL:0000147;4.16e-08;14!CL:0000039;1.38e-07;7!CL:0000586;1.38e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.18e-58,5;CL:0001024,9.73e-13,1;CL:0000148,4.02e-11,10;CL:0000541,4.02e-11,10;CL:0000147,4.27e-08,14;CL:0000039,1.43e-07,7;CL:0000586,1.43e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.25e-19;10!UBERON:0005564;3.25e-19;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.88e-25!115;UBERON:0001049!7.81e-17!57;UBERON:0005068!7.81e-17!57;UBERON:0006241!7.81e-17!57;UBERON:0007135!7.81e-17!57;UBERON:0005743!1.23e-14!86;UBERON:0002616!2.20e-14!59;UBERON:0001017!2.25e-14!82;UBERON:0001893!7.21e-13!34;UBERON:0000073!1.39e-12!94;UBERON:0001016!1.39e-12!94;UBERON:0000955!1.77e-12!69;UBERON:0006238!1.77e-12!69;UBERON:0001869!5.04e-12!32;UBERON:0002791!1.31e-11!33;UBERON:0003075!2.11e-11!86;UBERON:0007284!2.11e-11!86;UBERON:0003080!2.56e-11!42;UBERON:0002020!3.95e-11!34;UBERON:0003528!3.95e-11!34;UBERON:0002346!1.29e-10!90;UBERON:0002780!4.38e-10!41;UBERON:0001890!4.38e-10!41;UBERON:0006240!4.38e-10!41;UBERON:0002619!1.05e-09!22;UBERON:0001950!6.56e-09!20;UBERON:0000956!2.52e-08!25;UBERON:0000203!2.52e-08!25;UBERON:0000473!2.99e-08!8;UBERON:0001896!8.32e-08!3;UBERON:0005290!8.32e-08!3;UBERON:0010096!8.32e-08!3;UBERON:0003056!1.21e-07!61;UBERON:0002298!2.17e-07!8;UBERON:0000153!2.80e-07!129;UBERON:0007811!2.80e-07!129;UBERON:0000033!3.00e-07!123;UBERON:0003076!5.28e-07!15;UBERON:0003057!5.28e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.26e-24;8!UBERON:0003135;1.70e-17;11!UBERON:0000991;2.78e-09;21!UBERON:0003101;7.19e-09;22!UBERON:0000079;7.19e-09;22!UBERON:0000922;6.19e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.64e-24,8;UBERON:0003135,1.77e-17,11;UBERON:0000991,2.84e-09,21;UBERON:0009196,2.84e-09,21;UBERON:0009117,2.84e-09,21;UBERON:0005564,2.84e-09,21;UBERON:0004176,7.34e-09,22;UBERON:0003101,7.34e-09,22;UBERON:0000079,7.34e-09,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,1.17440175733939,0,0,0,0,1.6194683300949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0.560508562981536,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.0751124186843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31842236777572,2.12047629314376,3.36962434321603,2.28054321033815,3.5324919122588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,2.46535615237033,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.6080032699227,0,0,0,0,2.54004524022652,0,0,0,0,0,0,0,154.73466523063,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0,0,0,0.0769502585037971,0,0.46112780877612,0.359030577639089,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0.964518890790115,0,0,0,0,0.364497339948148,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0.5013797880454,0,0,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0.205116364240755,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0.0657727735628491,0,0,0.078493092850514,0.314231179832004,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.437119121007915,0,0,0,0.392616934229891,0.297046400327086,0,0,0.281951753939561,0.386747327841463,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.101988829741982,1.06886962106224,0,9.52688649311025,22.9609455601265,60.8278575454525,0,0,0,0,0.0645889098360061,0,0,0,0,0.217716747896961,0,0.0673520530145875,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p1@DPEP3 | |||
}} |
Revision as of 11:15, 11 September 2013
Short description: | p1@DPEP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_DPEP3_5end |
Coexpression cluster: | C158_adrenal_gastric_temporal_parietal_duodenum_caudate_putamen |
Association with transcript: | 28bp_to_NM_001129758, NM_022357, uc002evc.3, uc010cex.2_5end |
EntrezGene: | DPEP3 |
HGNC: | 23029 |
UniProt: | Q9H4B8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.18e-58 | 5 |
CD34-positive, CD38-negative hematopoietic stem cell | 9.73e-13 | 1 |
melanocyte | 4.02e-11 | 10 |
melanoblast | 4.02e-11 | 10 |
pigment cell | 4.27e-08 | 14 |
germ line cell | 1.43e-07 | 7 |
germ cell | 1.43e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 6.64e-24 | 8 |
male reproductive organ | 1.77e-17 | 11 |
gonad | 2.84e-09 | 21 |
indifferent external genitalia | 2.84e-09 | 21 |
indifferent gonad | 2.84e-09 | 21 |
gonad primordium | 2.84e-09 | 21 |
external genitalia | 7.34e-09 | 22 |
male organism | 7.34e-09 | 22 |
male reproductive system | 7.34e-09 | 22 |
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