FFCP PHASE1:Hg19::chr16:68420632..68420664,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C25|description=CAGE_peak_at_chr16:68420632..68420664,-|id=chr16:68420632..68420664,-|ontology_enrichment_celltype=CL:1000415!3.17e-07!2|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0001045;8.84e-08;1!UBERON:0006242;1.11e-07;1!UBERON:0000358;1.30e-07;1|ontology_enrichment_disease=DOID:3493!1.42e-07!2;DOID:299!2.72e-07!25|ontology_enrichment_disease_v019=DOID:0050619;5.22e-08;1!DOID:1357;5.22e-08;1|ontology_enrichment_disease_v019_2=DOID:0050619,5.22e-08,1;DOID:1357,5.22e-08,1|ontology_enrichment_uberon=UBERON:0005409!7.21e-22!35;UBERON:0000160!4.81e-19!27;UBERON:0004921!6.17e-17!129;UBERON:0004185!6.17e-17!129;UBERON:0001007!2.46e-16!155;UBERON:0001555!2.46e-16!155;UBERON:0007026!2.46e-16!155;UBERON:0000059!1.23e-15!11;UBERON:0004119!2.55e-14!169;UBERON:0000925!2.55e-14!169;UBERON:0006595!2.55e-14!169;UBERON:0004907!1.02e-11!5;UBERON:0000077!2.34e-11!130;UBERON:0002110!1.41e-10!3;UBERON:0006242!1.41e-10!3;UBERON:0001155!2.92e-10!9;UBERON:0001052!1.59e-08!4;UBERON:0003127!1.92e-08!2;UBERON:0000341!4.53e-08!2;UBERON:0003929!9.77e-08!54;UBERON:0002294!1.18e-07!7;UBERON:0001173!1.18e-07!7;UBERON:0004912!1.18e-07!7;UBERON:0009497!1.79e-07!25;UBERON:0000015!1.79e-07!25;UBERON:0002423!1.79e-07!25;UBERON:0006235!1.79e-07!25;UBERON:0004161!1.79e-07!25;UBERON:0005911!6.63e-07!82;UBERON:0000466!7.64e-07!126|ontology_enrichment_uberon_v019=UBERON:0005409;3.20e-32;22!UBERON:0000160;5.18e-28;17!UBERON:0004921;4.06e-22;33!UBERON:0000059;8.95e-15;11!UBERON:0003127;9.22e-14;2!UBERON:0000341;4.61e-13;2!UBERON:0002108;1.61e-12;4!UBERON:0001155;6.26e-12;9!UBERON:0001007;2.46e-10;81!UBERON:0001555;1.90e-08;54!UBERON:0000922;3.52e-08;49!UBERON:0001764;5.22e-08;1!UBERON:0001825;5.22e-08;1!UBERON:0001154;8.84e-08;1!UBERON:0001153;8.84e-08;1!UBERON:0009854;8.84e-08;1!UBERON:0002372;1.91e-07;1!UBERON:0001961;1.91e-07;1!UBERON:0001744;1.91e-07;1!UBERON:0001042;1.91e-07;1!UBERON:0001735;1.91e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.84e-28,25;UBERON:0000160,5.18e-28,17;UBERON:0004921,3.65e-19,118;UBERON:0001007,1.59e-16,145;UBERON:0001555,1.59e-16,145;UBERON:0007026,1.59e-16,145;UBERON:0000059,8.95e-15,11;UBERON:0004119,1.43e-14,160;UBERON:0000925,1.43e-14,160;UBERON:0006595,1.43e-14,160;UBERON:0003127,9.83e-14,2;UBERON:0000341,4.47e-13,2;UBERON:0002108,1.61e-12,4;UBERON:0001155,6.26e-12,9;UBERON:0011216,4.65e-09,223;UBERON:0001764,5.22e-08,1;UBERON:0001825,5.22e-08,1;UBERON:0001154,8.84e-08,1;UBERON:0001153,8.84e-08,1;UBERON:0001045,8.84e-08,1;UBERON:0002372,2.04e-07,1;UBERON:0001961,2.04e-07,1;UBERON:0001744,2.04e-07,1;UBERON:0001735,2.04e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.60530208930985,0,1.77236972004421,0,6.3953988042419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45031339509947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.80135675265481,0,0,0,0,0,0,0,0,0,0,0,0,4.98119970627674,8.56480138146558,2.26739473068848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.989471500037586,0,50.7583584850037,50.4208117669033,34.8287182612167,0,0,0,0,0,0,0,0.19566461893209,0,0,22.9882360492461,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0.0801588202515337,5.12287187374446,0,3.89044126316086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63794020620548,0,0,0,0,0,3.20362237703084,2.98688179689365,0.828478110694391,0,0,0,0,0,0,0,0,40.9911191213112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0.840816489941367,9.13158720509496,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0.111855431797792,0.196300467230486,0.853425474875886,0,0,0,0.485710993059139,1.63757624423474,0,0,0,0,0,76.7882873174049,21.4188369293878,0,0,0,0,0,0,0,0,0,0,0,0,0,35.0561466358328,0,0,0,0,0,37.031878836078,0,0,0,0,0,0,0.917899467677836,1.60330443159336,0.36757959813938,0,0,0,0,0,2.13233981900981,1.90451545170992,0,0.186224142887574,0,0,0,0,0,2.1552656964668,12.2644971221477,4.32458463509817,0,0,0,0,4.69281884806909,0,0.406896178315738,0,0.201273793591026,0|short_description=p@chr16:68420632..68420664,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_at_chr16:68420632..68420664,- | |||
|id=chr16:68420632..68420664,- | |||
|ontology_enrichment_celltype=CL:1000415!3.17e-07!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;8.84e-08;1!UBERON:0006242;1.11e-07;1!UBERON:0000358;1.30e-07;1 | |||
|ontology_enrichment_disease=DOID:3493!1.42e-07!2;DOID:299!2.72e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:0050619;5.22e-08;1!DOID:1357;5.22e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,5.22e-08,1;DOID:1357,5.22e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0005409!7.21e-22!35;UBERON:0000160!4.81e-19!27;UBERON:0004921!6.17e-17!129;UBERON:0004185!6.17e-17!129;UBERON:0001007!2.46e-16!155;UBERON:0001555!2.46e-16!155;UBERON:0007026!2.46e-16!155;UBERON:0000059!1.23e-15!11;UBERON:0004119!2.55e-14!169;UBERON:0000925!2.55e-14!169;UBERON:0006595!2.55e-14!169;UBERON:0004907!1.02e-11!5;UBERON:0000077!2.34e-11!130;UBERON:0002110!1.41e-10!3;UBERON:0006242!1.41e-10!3;UBERON:0001155!2.92e-10!9;UBERON:0001052!1.59e-08!4;UBERON:0003127!1.92e-08!2;UBERON:0000341!4.53e-08!2;UBERON:0003929!9.77e-08!54;UBERON:0002294!1.18e-07!7;UBERON:0001173!1.18e-07!7;UBERON:0004912!1.18e-07!7;UBERON:0009497!1.79e-07!25;UBERON:0000015!1.79e-07!25;UBERON:0002423!1.79e-07!25;UBERON:0006235!1.79e-07!25;UBERON:0004161!1.79e-07!25;UBERON:0005911!6.63e-07!82;UBERON:0000466!7.64e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;3.20e-32;22!UBERON:0000160;5.18e-28;17!UBERON:0004921;4.06e-22;33!UBERON:0000059;8.95e-15;11!UBERON:0003127;9.22e-14;2!UBERON:0000341;4.61e-13;2!UBERON:0002108;1.61e-12;4!UBERON:0001155;6.26e-12;9!UBERON:0001007;2.46e-10;81!UBERON:0001555;1.90e-08;54!UBERON:0000922;3.52e-08;49!UBERON:0001764;5.22e-08;1!UBERON:0001825;5.22e-08;1!UBERON:0001154;8.84e-08;1!UBERON:0001153;8.84e-08;1!UBERON:0009854;8.84e-08;1!UBERON:0002372;1.91e-07;1!UBERON:0001961;1.91e-07;1!UBERON:0001744;1.91e-07;1!UBERON:0001042;1.91e-07;1!UBERON:0001735;1.91e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.84e-28,25;UBERON:0000160,5.18e-28,17;UBERON:0004921,3.65e-19,118;UBERON:0001007,1.59e-16,145;UBERON:0001555,1.59e-16,145;UBERON:0007026,1.59e-16,145;UBERON:0000059,8.95e-15,11;UBERON:0004119,1.43e-14,160;UBERON:0000925,1.43e-14,160;UBERON:0006595,1.43e-14,160;UBERON:0003127,9.83e-14,2;UBERON:0000341,4.47e-13,2;UBERON:0002108,1.61e-12,4;UBERON:0001155,6.26e-12,9;UBERON:0011216,4.65e-09,223;UBERON:0001764,5.22e-08,1;UBERON:0001825,5.22e-08,1;UBERON:0001154,8.84e-08,1;UBERON:0001153,8.84e-08,1;UBERON:0001045,8.84e-08,1;UBERON:0002372,2.04e-07,1;UBERON:0001961,2.04e-07,1;UBERON:0001744,2.04e-07,1;UBERON:0001735,2.04e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.60530208930985,0,1.77236972004421,0,6.3953988042419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45031339509947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.80135675265481,0,0,0,0,0,0,0,0,0,0,0,0,4.98119970627674,8.56480138146558,2.26739473068848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.989471500037586,0,50.7583584850037,50.4208117669033,34.8287182612167,0,0,0,0,0,0,0,0.19566461893209,0,0,22.9882360492461,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0.0801588202515337,5.12287187374446,0,3.89044126316086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63794020620548,0,0,0,0,0,3.20362237703084,2.98688179689365,0.828478110694391,0,0,0,0,0,0,0,0,40.9911191213112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0.840816489941367,9.13158720509496,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0.111855431797792,0.196300467230486,0.853425474875886,0,0,0,0.485710993059139,1.63757624423474,0,0,0,0,0,76.7882873174049,21.4188369293878,0,0,0,0,0,0,0,0,0,0,0,0,0,35.0561466358328,0,0,0,0,0,37.031878836078,0,0,0,0,0,0,0.917899467677836,1.60330443159336,0.36757959813938,0,0,0,0,0,2.13233981900981,1.90451545170992,0,0.186224142887574,0,0,0,0,0,2.1552656964668,12.2644971221477,4.32458463509817,0,0,0,0,4.69281884806909,0,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p@chr16:68420632..68420664,- | |||
}} |
Revision as of 11:16, 11 September 2013
Short description: | p@chr16:68420632..68420664, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:68420632..68420664, - |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.84e-28 | 25 |
intestine | 5.18e-28 | 17 |
subdivision of digestive tract | 3.65e-19 | 118 |
digestive system | 1.59e-16 | 145 |
digestive tract | 1.59e-16 | 145 |
primitive gut | 1.59e-16 | 145 |
large intestine | 8.95e-15 | 11 |
endoderm-derived structure | 1.43e-14 | 160 |
endoderm | 1.43e-14 | 160 |
presumptive endoderm | 1.43e-14 | 160 |
open tracheal system trachea | 9.83e-14 | 2 |
throat | 4.47e-13 | 2 |
small intestine | 1.61e-12 | 4 |
colon | 6.26e-12 | 9 |
organ system subdivision | 4.65e-09 | 223 |
maxillary sinus | 5.22e-08 | 1 |
paranasal sinus | 5.22e-08 | 1 |
vermiform appendix | 8.84e-08 | 1 |
caecum | 8.84e-08 | 1 |
midgut | 8.84e-08 | 1 |
tonsil | 2.04e-07 | 1 |
mucosa-associated lymphoid tissue | 2.04e-07 | 1 |
lymphoid tissue | 2.04e-07 | 1 |
tonsillar ring | 2.04e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 5.22e-08 | 1 |
maxillary sinus cancer | 5.22e-08 | 1 |
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