FFCP PHASE1:Hg19::chr17:38612812..38612823,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C353|description=CAGE_peak_at_chr17:38612812..38612823,+|id=chr17:38612812..38612823,+|ontology_enrichment_celltype=CL:0000055!1.37e-16!180;CL:0000680!8.89e-11!57;CL:0000056!8.89e-11!57;CL:0000355!8.89e-11!57;CL:0000183!1.17e-10!59;CL:0000057!8.42e-10!75;CL:0000187!4.49e-09!54;CL:0000393!3.54e-08!60;CL:0000211!3.54e-08!60;CL:0000222!1.51e-07!119;CL:0000048!1.64e-07!430;CL:0000499!3.10e-07!27;CL:0000723!6.43e-07!436;CL:0000034!7.21e-07!444;CL:0000192!8.91e-07!42;CL:0000514!8.91e-07!42;CL:0000327!9.82e-07!14|ontology_enrichment_celltype_v019=CL:0000135;1.77e-11;3!CL:0000388;1.77e-11;3!CL:0002564;3.31e-11;3!CL:0000515;3.66e-10;3!CL:0002590;3.66e-10;3!CL:0000153;2.16e-09;9!CL:0000447;2.16e-09;9!CL:0000499;2.48e-08;28!CL:0000056;1.00e-07;4!CL:0000327;1.46e-07;15!CL:0000680;1.94e-07;7!CL:0002593;2.52e-07;2!CL:0002600;2.52e-07;2|ontology_enrichment_celltype_v019_2=CL:0000135,1.99e-11,3;CL:0000388,1.99e-11,3;CL:0002564,5.87e-11,3;CL:0002590,6.90e-10,3;CL:0000153,1.06e-09,9;CL:0000447,1.06e-09,9;CL:0000499,1.61e-08,28;CL:0000327,7.98e-08,15;CL:0002600,1.24e-07,2;CL:0000515,1.97e-07,4;CL:0002593,4.97e-07,2|ontology_enrichment_development_v019=CL:0000515;1.00e-07;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!5.18e-12!83;UBERON:0002329!5.18e-12!83;UBERON:0003077!5.18e-12!83;UBERON:0003059!5.18e-12!83;UBERON:0007282!5.18e-12!83;UBERON:0009618!5.18e-12!83;UBERON:0007285!5.18e-12!83;UBERON:0005256!2.53e-11!143;UBERON:0002100!6.31e-11!216;UBERON:0001134!3.08e-10!61;UBERON:0002036!3.08e-10!61;UBERON:0003082!3.08e-10!61;UBERON:0002385!4.74e-10!63;UBERON:0001015!4.74e-10!63;UBERON:0000383!4.74e-10!63;UBERON:0004290!3.12e-09!70;UBERON:0000490!1.45e-08!138;UBERON:0000486!1.88e-08!82;UBERON:0002049!1.75e-07!79;UBERON:0007798!1.75e-07!79|ontology_enrichment_uberon_v019=UBERON:0004905;6.56e-15;8!UBERON:0000982;6.56e-15;8!UBERON:0004770;6.56e-15;8!UBERON:0004457;1.68e-12;9!UBERON:0000042;1.68e-12;9!UBERON:0007846;1.77e-11;3!UBERON:0000043;1.77e-11;3!UBERON:0007845;1.77e-11;3!UBERON:0011135;3.25e-11;5!UBERON:0002216;3.25e-11;5!UBERON:0011134;3.25e-11;5!UBERON:0002209;3.25e-11;5!UBERON:0002213;3.25e-11;5!UBERON:0007844;3.25e-11;5!UBERON:0011138;3.25e-11;5!UBERON:0001130;3.25e-11;5!UBERON:0001066;3.25e-11;5!UBERON:0001468;3.25e-11;5!UBERON:0002242;3.31e-11;3!UBERON:0000075;1.50e-09;16!UBERON:0003688;1.13e-08;6!UBERON:0002358;1.13e-08;6!UBERON:0003684;1.13e-08;6!UBERON:0001178;1.13e-08;6!UBERON:0001434;1.22e-07;36!UBERON:0002204;2.10e-07;70!UBERON:0002456;2.52e-07;2!UBERON:0004765;3.86e-07;26|ontology_enrichment_uberon_v019_2=UBERON:0004905,3.88e-15,8;UBERON:0000982,3.88e-15,8;UBERON:0004770,3.88e-15,8;UBERON:0007846,1.99e-11,3;UBERON:0000043,1.99e-11,3;UBERON:0007845,1.99e-11,3;UBERON:0011135,3.39e-11,5;UBERON:0002216,3.39e-11,5;UBERON:0011134,3.39e-11,5;UBERON:0002209,3.39e-11,5;UBERON:0002213,3.39e-11,5;UBERON:0005856,3.39e-11,5;UBERON:0005866,3.39e-11,5;UBERON:0005863,3.39e-11,5;UBERON:0007844,3.39e-11,5;UBERON:0011138,3.39e-11,5;UBERON:0001130,3.39e-11,5;UBERON:0001066,3.39e-11,5;UBERON:0001468,3.39e-11,5;UBERON:0002242,5.87e-11,3;UBERON:0003068,5.87e-11,3;UBERON:0002328,5.87e-11,3;UBERON:0004880,5.87e-11,3;UBERON:0000075,1.17e-09,16;UBERON:0004457,2.93e-09,12;UBERON:0000042,2.93e-09,12;UBERON:0002204,3.86e-09,167;UBERON:0003688,1.52e-08,6;UBERON:0002358,1.52e-08,6;UBERON:0003684,1.52e-08,6;UBERON:0001178,1.52e-08,6;UBERON:0011137,2.40e-08,14;UBERON:0007524,2.43e-07,73;UBERON:0000486,4.76e-07,83;UBERON:0002456,4.97e-07,2;UBERON:0001134,9.29e-07,62;UBERON:0002036,9.29e-07,62;UBERON:0003082,9.29e-07,62|phase1_expression=0.908391896352783,1.07050261945492,1.12763523276777,0,1.34088328328186,0.872338524100369,0,0.631719873426831,1.04474251279935,0,0,0,0,1.60896258848061,0.994192127183747,0,0,0,0.975865597581014,0,0.816002764977012,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,1.80719576192283,2.00535164254356,4.92478164466801,0,0.486634870302636,0,0,0.351339142772504,0.196468613246569,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0,0,0,0.275118041940067,0.417989933073621,0.258416759169329,0.35576626268671,0.33472061276467,0,0,0,0,0,0.267899184852239,0.22452937262617,0.563057402416611,0,0,0.549605231791222,0,0,0,0.993943903390637,0.12663051166458,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0.622422070799533,0,0.490385709340376,0.756787138224657,0,0.234321431833797,0,0,0.149448680551801,0,0,0.140450806702248,0.204154171254893,0.245668634623536,0.826606249406124,0,1.97813543422845,0,0,0.168336113954066,0.1251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812..38612823,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C353 | |||
|description=CAGE_peak_at_chr17:38612812..38612823,+ | |||
|id=chr17:38612812..38612823,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.37e-16!180;CL:0000680!8.89e-11!57;CL:0000056!8.89e-11!57;CL:0000355!8.89e-11!57;CL:0000183!1.17e-10!59;CL:0000057!8.42e-10!75;CL:0000187!4.49e-09!54;CL:0000393!3.54e-08!60;CL:0000211!3.54e-08!60;CL:0000222!1.51e-07!119;CL:0000048!1.64e-07!430;CL:0000499!3.10e-07!27;CL:0000723!6.43e-07!436;CL:0000034!7.21e-07!444;CL:0000192!8.91e-07!42;CL:0000514!8.91e-07!42;CL:0000327!9.82e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000135;1.77e-11;3!CL:0000388;1.77e-11;3!CL:0002564;3.31e-11;3!CL:0000515;3.66e-10;3!CL:0002590;3.66e-10;3!CL:0000153;2.16e-09;9!CL:0000447;2.16e-09;9!CL:0000499;2.48e-08;28!CL:0000056;1.00e-07;4!CL:0000327;1.46e-07;15!CL:0000680;1.94e-07;7!CL:0002593;2.52e-07;2!CL:0002600;2.52e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,1.99e-11,3;CL:0000388,1.99e-11,3;CL:0002564,5.87e-11,3;CL:0002590,6.90e-10,3;CL:0000153,1.06e-09,9;CL:0000447,1.06e-09,9;CL:0000499,1.61e-08,28;CL:0000327,7.98e-08,15;CL:0002600,1.24e-07,2;CL:0000515,1.97e-07,4;CL:0002593,4.97e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000515;1.00e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.18e-12!83;UBERON:0002329!5.18e-12!83;UBERON:0003077!5.18e-12!83;UBERON:0003059!5.18e-12!83;UBERON:0007282!5.18e-12!83;UBERON:0009618!5.18e-12!83;UBERON:0007285!5.18e-12!83;UBERON:0005256!2.53e-11!143;UBERON:0002100!6.31e-11!216;UBERON:0001134!3.08e-10!61;UBERON:0002036!3.08e-10!61;UBERON:0003082!3.08e-10!61;UBERON:0002385!4.74e-10!63;UBERON:0001015!4.74e-10!63;UBERON:0000383!4.74e-10!63;UBERON:0004290!3.12e-09!70;UBERON:0000490!1.45e-08!138;UBERON:0000486!1.88e-08!82;UBERON:0002049!1.75e-07!79;UBERON:0007798!1.75e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;6.56e-15;8!UBERON:0000982;6.56e-15;8!UBERON:0004770;6.56e-15;8!UBERON:0004457;1.68e-12;9!UBERON:0000042;1.68e-12;9!UBERON:0007846;1.77e-11;3!UBERON:0000043;1.77e-11;3!UBERON:0007845;1.77e-11;3!UBERON:0011135;3.25e-11;5!UBERON:0002216;3.25e-11;5!UBERON:0011134;3.25e-11;5!UBERON:0002209;3.25e-11;5!UBERON:0002213;3.25e-11;5!UBERON:0007844;3.25e-11;5!UBERON:0011138;3.25e-11;5!UBERON:0001130;3.25e-11;5!UBERON:0001066;3.25e-11;5!UBERON:0001468;3.25e-11;5!UBERON:0002242;3.31e-11;3!UBERON:0000075;1.50e-09;16!UBERON:0003688;1.13e-08;6!UBERON:0002358;1.13e-08;6!UBERON:0003684;1.13e-08;6!UBERON:0001178;1.13e-08;6!UBERON:0001434;1.22e-07;36!UBERON:0002204;2.10e-07;70!UBERON:0002456;2.52e-07;2!UBERON:0004765;3.86e-07;26 | |||
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| |||
|short_description=p@chr17:38612812..38612823,+ | |||
}} |
Revision as of 13:27, 11 September 2013
Short description: | p@chr17:38612812..38612823, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:38612812..38612823, + |
Coexpression cluster: | C353_tenocyte_Nucleus_Chondrocyte_Anulus_Fibroblast_Synoviocyte_tridermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 1.99e-11 | 3 |
tendon cell | 1.99e-11 | 3 |
nucleus pulposus cell of intervertebral disc | 5.87e-11 | 3 |
smooth muscle cell of the brain vasculature | 6.90e-10 | 3 |
GAG secreting cell | 1.06e-09 | 9 |
carbohydrate secreting cell | 1.06e-09 | 9 |
stromal cell | 1.61e-08 | 28 |
extracellular matrix secreting cell | 7.98e-08 | 15 |
smooth muscle cell of trachea | 1.24e-07 | 2 |
skeletal muscle myoblast | 1.97e-07 | 4 |
smooth muscle cell of the internal thoracic artery | 4.97e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.