FFCP PHASE1:Hg19::chr17:67323213..67323216,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23461|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=35|TSSclassifier=S|UniProt=E7ETD3,Q8WWZ7|association_with_transcript=106bp_to_ENST00000392677,NM_172232,uc002jig.2,uc002jih.2,uc010dfe.2_5end|description=CAGE_peak_5_at_ABCA5_5end|id=chr17:67323213..67323216,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000167;1.13e-08;1!CL:0000164;1.13e-08;1!CL:0000502;1.13e-08;1!CL:0000172;1.13e-08;1!CL:0000173;1.13e-08;1|ontology_enrichment_celltype_v019_2=CL:0000167,7.18e-09,1;CL:0000164,7.18e-09,1;CL:0000502,7.18e-09,1;CL:0000172,7.18e-09,1;CL:0000173,7.18e-09,1;CL:0002351,7.18e-09,1|ontology_enrichment_development_v019=UBERON:0006215;5.54e-11;3!CL:0002351;1.13e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4430;1.13e-08;1!DOID:171;3.88e-07;10!DOID:4362;5.73e-07;5|ontology_enrichment_disease_v019_2=DOID:4430,7.18e-09,1;DOID:171,4.41e-07,10;DOID:4362,6.45e-07,5|ontology_enrichment_uberon=UBERON:0007023!6.50e-14!115;UBERON:0000062!7.30e-07!511|ontology_enrichment_uberon_v019=UBERON:0001389;3.06e-09;1!UBERON:0000026;3.06e-09;1!UBERON:0008784;3.06e-09;1!UBERON:0006058;3.06e-09;1!UBERON:0003663;3.06e-09;1!UBERON:0004256;3.06e-09;1!UBERON:0004708;3.06e-09;1!UBERON:0002101;3.06e-09;1!UBERON:0004709;3.06e-09;1!UBERON:0002529;3.06e-09;1!UBERON:0010538;3.06e-09;1!UBERON:0003661;3.06e-09;1!UBERON:0010890;3.06e-09;1!UBERON:0002471;3.06e-09;1!UBERON:0001383;3.06e-09;1!UBERON:0010758;3.06e-09;1!UBERON:0010707;3.06e-09;1!UBERON:0000978;3.06e-09;1!UBERON:0002103;3.06e-09;1!UBERON:0001665;3.06e-09;1!UBERON:0003823;3.06e-09;1!UBERON:0000154;3.06e-09;1!UBERON:0010709;3.06e-09;1!UBERON:0000996;1.13e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0005418,3.06e-09,1;UBERON:0001389,3.06e-09,1;UBERON:0000026,3.06e-09,1;UBERON:0008784,3.06e-09,1;UBERON:0006058,3.06e-09,1;UBERON:0003663,3.06e-09,1;UBERON:0004256,3.06e-09,1;UBERON:0004708,3.06e-09,1;UBERON:0002101,3.06e-09,1;UBERON:0004709,3.06e-09,1;UBERON:0002529,3.06e-09,1;UBERON:0010538,3.06e-09,1;UBERON:0003661,3.06e-09,1;UBERON:0010890,3.06e-09,1;UBERON:0002471,3.06e-09,1;UBERON:0001383,3.06e-09,1;UBERON:0004357,3.06e-09,1;UBERON:0004347,3.06e-09,1;UBERON:0005420,3.06e-09,1;UBERON:0005732,3.06e-09,1;UBERON:0010758,3.06e-09,1;UBERON:0010707,3.06e-09,1;UBERON:0000978,3.06e-09,1;UBERON:0002103,3.06e-09,1;UBERON:0001665,3.06e-09,1;UBERON:0003823,3.06e-09,1;UBERON:0000154,3.06e-09,1;UBERON:0010709,3.06e-09,1;UBERON:0005733,3.06e-09,1;UBERON:0005730,3.06e-09,1;UBERON:0000996,1.22e-08,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,0,0.512321413058201,0,0.689491361473237,0.645484683583826,0,0,0,0,0.306083892370903,0.962787081228281,0.639337125799041,0,0,0,0,0.56738522469114,0.622822248995575,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.534880391567015,0,0,0,0,0.361439152384566,0,0,0.795285947051099,0,0,0,0,0.261958150995425,0,0,0.324547393654683,0.174129737299267,0.132957960518865,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0.17859945656816,0,0.225222960966644,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0.257640540045629,0,0,0.0974370051611986,0.504867548488229,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0,0.435758888184812,0.71181185733329,0.134831308160164,0.196221465125346,0,0,0,0,0,2.53510069643662,1.96565443335525,3.54473944008842,0,0.245976877086227,0.171567810298526,0,0,0.402115889646523,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0.335964256397719,0,0.447792613514241,0.871901815541886,0,1.97065295158377,0.088048434013226,0.621984346622316,0.144119953416961,0.37872730027914,0,0,0,0,0.205654985406647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315404830067869,0,0,0,0,0,0,0,0,0,0.620304078368662,0,0.106727557803444,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.309123034943167,0.366277859273374,0.165018999841176,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0.0852266274161009,0,0,0.576570202095319,1.02090169995667,0.809262246844399,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0.0962221127255121,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187140540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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23461 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=35 | |||
|TSSclassifier=S | |||
|UniProt=E7ETD3,Q8WWZ7 | |||
|association_with_transcript=106bp_to_ENST00000392677,NM_172232,uc002jig.2,uc002jih.2,uc010dfe.2_5end | |||
|description=CAGE_peak_5_at_ABCA5_5end | |||
|id=chr17:67323213..67323216,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000167;1.13e-08;1!CL:0000164;1.13e-08;1!CL:0000502;1.13e-08;1!CL:0000172;1.13e-08;1!CL:0000173;1.13e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,7.18e-09,1;CL:0000164,7.18e-09,1;CL:0000502,7.18e-09,1;CL:0000172,7.18e-09,1;CL:0000173,7.18e-09,1;CL:0002351,7.18e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.54e-11;3!CL:0002351;1.13e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;1.13e-08;1!DOID:171;3.88e-07;10!DOID:4362;5.73e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,7.18e-09,1;DOID:171,4.41e-07,10;DOID:4362,6.45e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.50e-14!115;UBERON:0000062!7.30e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;3.06e-09;1!UBERON:0000026;3.06e-09;1!UBERON:0008784;3.06e-09;1!UBERON:0006058;3.06e-09;1!UBERON:0003663;3.06e-09;1!UBERON:0004256;3.06e-09;1!UBERON:0004708;3.06e-09;1!UBERON:0002101;3.06e-09;1!UBERON:0004709;3.06e-09;1!UBERON:0002529;3.06e-09;1!UBERON:0010538;3.06e-09;1!UBERON:0003661;3.06e-09;1!UBERON:0010890;3.06e-09;1!UBERON:0002471;3.06e-09;1!UBERON:0001383;3.06e-09;1!UBERON:0010758;3.06e-09;1!UBERON:0010707;3.06e-09;1!UBERON:0000978;3.06e-09;1!UBERON:0002103;3.06e-09;1!UBERON:0001665;3.06e-09;1!UBERON:0003823;3.06e-09;1!UBERON:0000154;3.06e-09;1!UBERON:0010709;3.06e-09;1!UBERON:0000996;1.13e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,3.06e-09,1;UBERON:0001389,3.06e-09,1;UBERON:0000026,3.06e-09,1;UBERON:0008784,3.06e-09,1;UBERON:0006058,3.06e-09,1;UBERON:0003663,3.06e-09,1;UBERON:0004256,3.06e-09,1;UBERON:0004708,3.06e-09,1;UBERON:0002101,3.06e-09,1;UBERON:0004709,3.06e-09,1;UBERON:0002529,3.06e-09,1;UBERON:0010538,3.06e-09,1;UBERON:0003661,3.06e-09,1;UBERON:0010890,3.06e-09,1;UBERON:0002471,3.06e-09,1;UBERON:0001383,3.06e-09,1;UBERON:0004357,3.06e-09,1;UBERON:0004347,3.06e-09,1;UBERON:0005420,3.06e-09,1;UBERON:0005732,3.06e-09,1;UBERON:0010758,3.06e-09,1;UBERON:0010707,3.06e-09,1;UBERON:0000978,3.06e-09,1;UBERON:0002103,3.06e-09,1;UBERON:0001665,3.06e-09,1;UBERON:0003823,3.06e-09,1;UBERON:0000154,3.06e-09,1;UBERON:0010709,3.06e-09,1;UBERON:0005733,3.06e-09,1;UBERON:0005730,3.06e-09,1;UBERON:0000996,1.22e-08,1 | |||
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| |||
|short_description=p5@ABCA5 | |||
}} |
Revision as of 15:16, 11 September 2013
Short description: | p5@ABCA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_ABCA5_5end |
Coexpression cluster: | NA |
Association with transcript: | 106bp_to_ENST00000392677, NM_172232, uc002jig.2, uc002jih.2, uc010dfe.2_5end |
EntrezGene: | ABCA5 |
HGNC: | 35 |
UniProt: | E7ETD3Q8WWZ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 7.18e-09 | 1 |
enteroendocrine cell | 7.18e-09 | 1 |
type D enteroendocrine cell | 7.18e-09 | 1 |
somatostatin secreting cell | 7.18e-09 | 1 |
pancreatic D cell | 7.18e-09 | 1 |
progenitor cell of endocrine pancreas | 7.18e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 3.06e-09 | 1 |
soleus muscle | 3.06e-09 | 1 |
appendage | 3.06e-09 | 1 |
lower limb segment | 3.06e-09 | 1 |
multi-limb segment region | 3.06e-09 | 1 |
hindlimb muscle | 3.06e-09 | 1 |
hindlimb zeugopod muscle | 3.06e-09 | 1 |
paired limb/fin | 3.06e-09 | 1 |
limb | 3.06e-09 | 1 |
pelvic appendage | 3.06e-09 | 1 |
limb segment | 3.06e-09 | 1 |
paired limb/fin segment | 3.06e-09 | 1 |
limb muscle | 3.06e-09 | 1 |
pelvic complex muscle | 3.06e-09 | 1 |
zeugopod | 3.06e-09 | 1 |
muscle of leg | 3.06e-09 | 1 |
paired limb/fin bud | 3.06e-09 | 1 |
limb bud | 3.06e-09 | 1 |
pelvic appendage bud | 3.06e-09 | 1 |
limb/fin field | 3.06e-09 | 1 |
subdivision of organism along appendicular axis | 3.06e-09 | 1 |
appendage girdle complex | 3.06e-09 | 1 |
leg | 3.06e-09 | 1 |
hindlimb | 3.06e-09 | 1 |
triceps surae | 3.06e-09 | 1 |
hindlimb zeugopod | 3.06e-09 | 1 |
posterior region of body | 3.06e-09 | 1 |
pelvic complex | 3.06e-09 | 1 |
limb field | 3.06e-09 | 1 |
hindlimb/pelvic fin field | 3.06e-09 | 1 |
vagina | 1.22e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 7.18e-09 | 1 |
neuroectodermal tumor | 4.41e-07 | 10 |
cervical cancer | 6.45e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.