FFCP PHASE1:Hg19::chr18:47340483..47340506,+: Difference between revisions
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{{FFCP | 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9646188,4.92561538418556,7.502995644373,2.48750831837634,0.930896962757057,4.26467963801962,8.80838396415839,1.35636710655613,0.186224142887574,0.784923038064294,1.59117895695412,6.06351566874658,2.39488422686657,2.39563310759697,1.0776328482334,1.14755528628282,5.65522606128223,0.651226148887796,0.960546112899439,0,1.16772762738563,7.03922827210363,2.44482888365733,5.69654649642034,3.99454064511308,4.6292972525936,0|short_description=p2@SCARNA17}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=32574 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000516183_5end | |||
|coexpression_cluster_id=C2461 | |||
|description=CAGE_peak_2_at_SCARNA17_5end | |||
|id=chr18:47340483..47340506,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.71e-12!18;CL:0000789!2.71e-12!18;CL:0002420!2.71e-12!18;CL:0002419!2.71e-12!18;CL:0000790!2.71e-12!18;CL:0000084!1.11e-08!25;CL:0000827!1.11e-08!25;CL:0000625!1.60e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.97e-13;18!CL:0000789;1.97e-13;18!CL:0002419;1.97e-13;18!CL:0000084;6.61e-10;25!CL:0000625;3.36e-09;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.73e-13,18;CL:0000789,3.73e-13,18;CL:0002420,3.73e-13,18;CL:0002419,3.73e-13,18;CL:0000790,3.73e-13,18;CL:0000084,1.82e-09,25;CL:0000827,1.82e-09,25;CL:0000625,4.42e-09,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.97e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.38e-10!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.47e-07;15!UBERON:0000179;9.47e-07;15!UBERON:0000463;9.47e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.87e-09,114 | |||
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| |||
|short_description=p2@SCARNA17 | |||
}} |
Revision as of 17:39, 11 September 2013
Short description: | p2@SCARNA17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SCARNA17_5end |
Coexpression cluster: | C2461_CD8_CD4_Natural_Basophils_CD34_Mesenchymal_uterus |
Association with transcript: | 0bp_to_ENST00000516183_5end |
EntrezGene: | NA |
HGNC: | 32574 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.73e-13 | 18 |
alpha-beta T cell | 3.73e-13 | 18 |
immature T cell | 3.73e-13 | 18 |
mature T cell | 3.73e-13 | 18 |
immature alpha-beta T cell | 3.73e-13 | 18 |
T cell | 1.82e-09 | 25 |
pro-T cell | 1.82e-09 | 25 |
CD8-positive, alpha-beta T cell | 4.42e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.87e-09 | 114 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.