FFCP PHASE1:Hg19::chr1:144931788..144931802,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9659|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15580|TSSclassifier=S|UniProt=F8WAP5|association_with_transcript=-80bp_to_ENST00000369353_5end|description=CAGE_peak_20_at_PDE4DIP_5end|id=chr1:144931788..144931802,-|ontology_enrichment_celltype=CL:0000055!9.12e-10!180;CL:0000680!1.07e-09!57;CL:0000056!1.07e-09!57;CL:0000355!1.07e-09!57;CL:0000393!1.99e-09!60;CL:0000211!1.99e-09!60;CL:0000187!8.48e-09!54;CL:0000183!3.41e-07!59|ontology_enrichment_celltype_v019=CL:0002561;9.49e-11;2!CL:0002593;3.66e-10;2!CL:0002559;2.30e-09;5!CL:0002595;1.05e-08;5!CL:0002573;4.84e-07;2!CL:0000594;8.53e-07;3|ontology_enrichment_celltype_v019_2=CL:0002561,1.00e-10,2;CL:0002593,5.55e-10,2;CL:0002559,2.38e-09,5;CL:0002595,1.65e-08,5;CL:0002573,5.00e-07,2;CL:0000594,8.56e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.25e-11!82;UBERON:0000073!1.28e-11!94;UBERON:0001016!1.28e-11!94;UBERON:0001049!4.22e-11!57;UBERON:0005068!4.22e-11!57;UBERON:0006241!4.22e-11!57;UBERON:0007135!4.22e-11!57;UBERON:0005743!5.80e-11!86;UBERON:0002616!4.21e-09!59;UBERON:0000475!4.82e-09!365;UBERON:0004121!4.84e-09!169;UBERON:0000914!9.89e-09!83;UBERON:0002329!9.89e-09!83;UBERON:0003077!9.89e-09!83;UBERON:0003059!9.89e-09!83;UBERON:0007282!9.89e-09!83;UBERON:0009618!9.89e-09!83;UBERON:0007285!9.89e-09!83;UBERON:0000924!1.04e-08!173;UBERON:0006601!1.04e-08!173;UBERON:0000955!2.37e-08!69;UBERON:0006238!2.37e-08!69;UBERON:0001134!2.51e-08!61;UBERON:0002036!2.51e-08!61;UBERON:0003082!2.51e-08!61;UBERON:0002385!2.64e-08!63;UBERON:0001015!2.64e-08!63;UBERON:0000383!2.64e-08!63;UBERON:0003075!4.84e-08!86;UBERON:0007284!4.84e-08!86;UBERON:0000033!1.16e-07!123;UBERON:0002346!1.53e-07!90;UBERON:0004290!1.57e-07!70;UBERON:0002298!1.97e-07!8;UBERON:0003080!2.25e-07!42;UBERON:0000486!5.09e-07!82;UBERON:0002020!5.52e-07!34;UBERON:0003528!5.52e-07!34;UBERON:0000153!6.74e-07!129;UBERON:0007811!6.74e-07!129;UBERON:0002780!7.11e-07!41;UBERON:0001890!7.11e-07!41;UBERON:0006240!7.11e-07!41;UBERON:0001893!8.52e-07!34|ontology_enrichment_uberon_v019=UBERON:0001896;3.38e-14;3!UBERON:0005290;3.38e-14;3!UBERON:0005933;9.49e-11;2!UBERON:0005942;9.49e-11;2!UBERON:0005932;9.49e-11;2!UBERON:0002456;3.66e-10;2!UBERON:0002073;2.30e-09;5!UBERON:0003834;1.05e-08;5!UBERON:0001533;1.05e-08;5!UBERON:0002298;2.54e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0001896,2.37e-14,3;UBERON:0005290,2.37e-14,3;UBERON:0010096,2.37e-14,3;UBERON:0005933,1.00e-10,2;UBERON:0005942,1.00e-10,2;UBERON:0005932,1.00e-10,2;UBERON:0002456,5.55e-10,2;UBERON:0002073,2.38e-09,5;UBERON:0005086,2.38e-09,5;UBERON:0003834,1.65e-08,5;UBERON:0001533,1.65e-08,5;UBERON:0002298,2.14e-07,6|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0.872338524100369,0,0.631719873426831,0.783556884599516,0,0,0.218441372130172,0,0,0.331397375727916,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0.411167888021826,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,1.34140171940727,0,1.0843174571537,0,0.144846518960824,0,0,0.189069634328136,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0.25326102332916,1.19168262731897,0,0,0,0,0,0.311211035399766,0,0,0,0,0.234321431833797,0,0,0.149448680551801,0.117434498643765,0,0,0,0.122834317311768,0.206651562351531,3.56400857184616,1.48360157567134,0,0,0,0.125118519871964,0.554128230968366,0,1.22595118319608,1.50238058906597,0.113432183160021,0,0.640672166455702,0.423863802319124,0.300091096084402,0,0.257640540045629,0.37223371266318,0,0.0974370051611986,0,0.368199594569197,0.161646056818812,0.355009592516614,0,0,0,0.272746120590835,0,0,0,0.116193942869518,0,0,0,6.25798129319264,0,0,11.1448302727675,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0.185176890317059,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87192013766656,0,0.646358578788889,3.57656445851882,0.845302752556,0.26593811658487,0,0.514414748524284,0,0,0.285955987316295,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0,0,0,0,0.76228387266739,0,0.773288812777695,0.167516265334349,0,0,0,0,0.36807447515742,0.500170521059677,0,0.415941723061614,0.178428988797162,0,0.117141414992713,0.601892199455438,0,2.0694614258501,0,0,1.04260337361699,0,0,0,0.215714200818617,0,0,0,0,0.248107807818777,0.306923946576125,0,0.128139149255701,0,0,0,0,0.177561725313127,0.08212715601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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9659 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15580 | |||
|TSSclassifier=S | |||
|UniProt=F8WAP5 | |||
|association_with_transcript=-80bp_to_ENST00000369353_5end | |||
|description=CAGE_peak_20_at_PDE4DIP_5end | |||
|id=chr1:144931788..144931802,- | |||
|ontology_enrichment_celltype=CL:0000055!9.12e-10!180;CL:0000680!1.07e-09!57;CL:0000056!1.07e-09!57;CL:0000355!1.07e-09!57;CL:0000393!1.99e-09!60;CL:0000211!1.99e-09!60;CL:0000187!8.48e-09!54;CL:0000183!3.41e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002561;9.49e-11;2!CL:0002593;3.66e-10;2!CL:0002559;2.30e-09;5!CL:0002595;1.05e-08;5!CL:0002573;4.84e-07;2!CL:0000594;8.53e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002561,1.00e-10,2;CL:0002593,5.55e-10,2;CL:0002559,2.38e-09,5;CL:0002595,1.65e-08,5;CL:0002573,5.00e-07,2;CL:0000594,8.56e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.25e-11!82;UBERON:0000073!1.28e-11!94;UBERON:0001016!1.28e-11!94;UBERON:0001049!4.22e-11!57;UBERON:0005068!4.22e-11!57;UBERON:0006241!4.22e-11!57;UBERON:0007135!4.22e-11!57;UBERON:0005743!5.80e-11!86;UBERON:0002616!4.21e-09!59;UBERON:0000475!4.82e-09!365;UBERON:0004121!4.84e-09!169;UBERON:0000914!9.89e-09!83;UBERON:0002329!9.89e-09!83;UBERON:0003077!9.89e-09!83;UBERON:0003059!9.89e-09!83;UBERON:0007282!9.89e-09!83;UBERON:0009618!9.89e-09!83;UBERON:0007285!9.89e-09!83;UBERON:0000924!1.04e-08!173;UBERON:0006601!1.04e-08!173;UBERON:0000955!2.37e-08!69;UBERON:0006238!2.37e-08!69;UBERON:0001134!2.51e-08!61;UBERON:0002036!2.51e-08!61;UBERON:0003082!2.51e-08!61;UBERON:0002385!2.64e-08!63;UBERON:0001015!2.64e-08!63;UBERON:0000383!2.64e-08!63;UBERON:0003075!4.84e-08!86;UBERON:0007284!4.84e-08!86;UBERON:0000033!1.16e-07!123;UBERON:0002346!1.53e-07!90;UBERON:0004290!1.57e-07!70;UBERON:0002298!1.97e-07!8;UBERON:0003080!2.25e-07!42;UBERON:0000486!5.09e-07!82;UBERON:0002020!5.52e-07!34;UBERON:0003528!5.52e-07!34;UBERON:0000153!6.74e-07!129;UBERON:0007811!6.74e-07!129;UBERON:0002780!7.11e-07!41;UBERON:0001890!7.11e-07!41;UBERON:0006240!7.11e-07!41;UBERON:0001893!8.52e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;3.38e-14;3!UBERON:0005290;3.38e-14;3!UBERON:0005933;9.49e-11;2!UBERON:0005942;9.49e-11;2!UBERON:0005932;9.49e-11;2!UBERON:0002456;3.66e-10;2!UBERON:0002073;2.30e-09;5!UBERON:0003834;1.05e-08;5!UBERON:0001533;1.05e-08;5!UBERON:0002298;2.54e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,2.37e-14,3;UBERON:0005290,2.37e-14,3;UBERON:0010096,2.37e-14,3;UBERON:0005933,1.00e-10,2;UBERON:0005942,1.00e-10,2;UBERON:0005932,1.00e-10,2;UBERON:0002456,5.55e-10,2;UBERON:0002073,2.38e-09,5;UBERON:0005086,2.38e-09,5;UBERON:0003834,1.65e-08,5;UBERON:0001533,1.65e-08,5;UBERON:0002298,2.14e-07,6 | |||
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| |||
|short_description=p20@PDE4DIP | |||
}} |
Revision as of 00:01, 12 September 2013
Short description: | p20@PDE4DIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_20_at_PDE4DIP_5end |
Coexpression cluster: | NA |
Association with transcript: | -80bp_to_ENST00000369353_5end |
EntrezGene: | PDE4DIP |
HGNC: | 15580 |
UniProt: | F8WAP5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
outer root sheath cell | 1.00e-10 | 2 |
smooth muscle cell of the internal thoracic artery | 5.55e-10 | 2 |
hair follicle cell | 2.38e-09 | 5 |
smooth muscle cell of the subclavian artery | 1.65e-08 | 5 |
Schwann cell | 5.00e-07 | 2 |
skeletal muscle satellite cell | 8.56e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 2.37e-14 | 3 |
myelencephalon | 2.37e-14 | 3 |
future myelencephalon | 2.37e-14 | 3 |
hair root sheath | 1.00e-10 | 2 |
hair outer root sheath | 1.00e-10 | 2 |
bulb of hair follicle | 1.00e-10 | 2 |
internal thoracic artery | 5.55e-10 | 2 |
hair follicle | 2.38e-09 | 5 |
hair follicle placode | 2.38e-09 | 5 |
thoracic segment blood vessel | 1.65e-08 | 5 |
subclavian artery | 1.65e-08 | 5 |
brainstem | 2.14e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.