FFCP PHASE1:Hg19::chr1:158301019..158301040,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=910|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1635|TSSclassifier=W|UniProt=|association_with_transcript=-167bp_to_uc001frw.2_5end|coexpression_cluster_id=C46|description=CAGE_peak_7_at_CD1B_5end|id=chr1:158301019..158301040,-|ontology_enrichment_celltype=CL:0000840!3.13e-23!5;CL:0001029!3.13e-23!5;CL:0000990!1.00e-15!8;CL:0000451!5.49e-13!10;CL:0002583!8.09e-09!2|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006965;1.07e-17;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!1.90e-20!7;UBERON:0002370!1.42e-16!4;UBERON:0005058!1.42e-16!4;UBERON:0009113!1.42e-16!4;UBERON:0003295!1.42e-16!4;UBERON:0005562!1.42e-16!4;UBERON:0002146!2.25e-16!1;UBERON:0005623!2.25e-16!1;UBERON:0000974!1.41e-14!10;UBERON:0003351!2.25e-11!6;UBERON:0000341!5.49e-09!2;UBERON:0003408!3.54e-07!10;UBERON:0001042!3.54e-07!10;UBERON:0009145!3.54e-07!10|ontology_enrichment_uberon_v019=UBERON:0002370;1.45e-66;2!UBERON:0005058;1.45e-66;2!UBERON:0009113;1.45e-66;2!UBERON:0004177;2.08e-27;5!UBERON:0005057;2.08e-27;5|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.98e-34,4;UBERON:0005058,5.98e-34,4;UBERON:0009113,5.98e-34,4;UBERON:0003295,5.98e-34,4;UBERON:0005562,5.98e-34,4;UBERON:0003351,4.86e-23,6;UBERON:0004177,6.48e-20,7;UBERON:0005057,6.48e-20,7;UBERON:0000974,2.84e-14,10;UBERON:0003408,2.84e-14,10;UBERON:0001042,2.84e-14,10;UBERON:0009145,2.84e-14,10;UBERON:0006562,4.52e-13,11;UBERON:0009722,4.52e-13,11;UBERON:0007690,4.52e-13,11;UBERON:0008814,2.25e-08,18;UBERON:0001557,5.54e-08,19|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.522389211897802,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.7040633418083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08773192782946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714193294391221,29.3879539753828,25.761006432781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02547587182052,0|short_description=p7@CD1B}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=910 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1635 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-167bp_to_uc001frw.2_5end | |||
|coexpression_cluster_id=C46 | |||
|description=CAGE_peak_7_at_CD1B_5end | |||
|id=chr1:158301019..158301040,- | |||
|ontology_enrichment_celltype=CL:0000840!3.13e-23!5;CL:0001029!3.13e-23!5;CL:0000990!1.00e-15!8;CL:0000451!5.49e-13!10;CL:0002583!8.09e-09!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006965;1.07e-17;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.90e-20!7;UBERON:0002370!1.42e-16!4;UBERON:0005058!1.42e-16!4;UBERON:0009113!1.42e-16!4;UBERON:0003295!1.42e-16!4;UBERON:0005562!1.42e-16!4;UBERON:0002146!2.25e-16!1;UBERON:0005623!2.25e-16!1;UBERON:0000974!1.41e-14!10;UBERON:0003351!2.25e-11!6;UBERON:0000341!5.49e-09!2;UBERON:0003408!3.54e-07!10;UBERON:0001042!3.54e-07!10;UBERON:0009145!3.54e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.45e-66;2!UBERON:0005058;1.45e-66;2!UBERON:0009113;1.45e-66;2!UBERON:0004177;2.08e-27;5!UBERON:0005057;2.08e-27;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.98e-34,4;UBERON:0005058,5.98e-34,4;UBERON:0009113,5.98e-34,4;UBERON:0003295,5.98e-34,4;UBERON:0005562,5.98e-34,4;UBERON:0003351,4.86e-23,6;UBERON:0004177,6.48e-20,7;UBERON:0005057,6.48e-20,7;UBERON:0000974,2.84e-14,10;UBERON:0003408,2.84e-14,10;UBERON:0001042,2.84e-14,10;UBERON:0009145,2.84e-14,10;UBERON:0006562,4.52e-13,11;UBERON:0009722,4.52e-13,11;UBERON:0007690,4.52e-13,11;UBERON:0008814,2.25e-08,18;UBERON:0001557,5.54e-08,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.522389211897802,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.7040633418083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08773192782946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714193294391221,29.3879539753828,25.761006432781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02547587182052,0 | |||
|short_description=p7@CD1B | |||
}} |
Revision as of 01:03, 12 September 2013
Short description: | p7@CD1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_CD1B_5end |
Coexpression cluster: | C46_acute_Hodgkin_thymus_CD8_chronic_CD4_merkel |
Association with transcript: | -167bp_to_uc001frw.2_5end |
EntrezGene: | CD1B |
HGNC: | 1635 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 5.98e-34 | 4 |
hemolymphoid system gland | 5.98e-34 | 4 |
thymic region | 5.98e-34 | 4 |
pharyngeal gland | 5.98e-34 | 4 |
thymus primordium | 5.98e-34 | 4 |
pharyngeal epithelium | 4.86e-23 | 6 |
hemopoietic organ | 6.48e-20 | 7 |
immune organ | 6.48e-20 | 7 |
neck | 2.84e-14 | 10 |
gland of gut | 2.84e-14 | 10 |
chordate pharynx | 2.84e-14 | 10 |
pharyngeal region of foregut | 2.84e-14 | 10 |
pharynx | 4.52e-13 | 11 |
entire pharyngeal arch endoderm | 4.52e-13 | 11 |
early pharyngeal endoderm | 4.52e-13 | 11 |
pharyngeal arch system | 2.25e-08 | 18 |
upper respiratory tract | 5.54e-08 | 19 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.