FFCP PHASE1:Hg19::chr1:168464875..168464884,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000422253_5end|coexpression_cluster_id=C5|description=CAGE_peak_1_at_ENST00000422253_5end|id=chr1:168464875..168464884,-|ontology_enrichment_celltype=CL:0000181!8.89e-25!12;CL:0000417!8.89e-25!12;CL:0000668!8.89e-25!12;CL:0000414!8.89e-25!12;CL:0000412!8.89e-25!12;CL:0000182!8.89e-25!12;CL:0000223!5.18e-12!59|ontology_enrichment_celltype_v019=CL:0000182;2.83e-33;12!CL:0002563;1.44e-07;4|ontology_enrichment_celltype_v019_2=CL:0000182,2.21e-33,12;CL:0000223,5.74e-11,58;CL:0002563,1.49e-07,4|ontology_enrichment_development_v019=UBERON:0004161;7.08e-56;11!UBERON:0009497;2.27e-47;13!UBERON:0001041;8.65e-21;30!UBERON:0003104;4.50e-20;31!CL:0000223;3.17e-08;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!4.37e-30!19;UBERON:0006925!4.37e-30!19;UBERON:0008836!4.37e-30!19;UBERON:0009497!1.75e-29!25;UBERON:0000015!1.75e-29!25;UBERON:0002423!1.75e-29!25;UBERON:0006235!1.75e-29!25;UBERON:0004161!1.75e-29!25;UBERON:0005057!2.93e-28!26;UBERON:0008835!6.44e-26!22;UBERON:0003894!6.44e-26!22;UBERON:0009854!9.07e-25!23;UBERON:0005172!2.45e-24!55;UBERON:0005173!2.45e-24!55;UBERON:0007499!9.55e-23!25;UBERON:0009856!7.50e-22!26;UBERON:0002417!8.23e-22!61;UBERON:0000916!8.23e-22!61;UBERON:0003929!1.11e-20!54;UBERON:0002365!3.06e-18!31;UBERON:0002330!3.06e-18!31;UBERON:0002368!4.32e-16!35;UBERON:0005911!3.39e-13!82;UBERON:0000949!2.21e-12!45;UBERON:0002530!4.79e-12!59;UBERON:0005177!7.98e-12!107;UBERON:0009569!4.06e-11!113;UBERON:0004921!1.55e-09!129;UBERON:0004185!1.55e-09!129;UBERON:0001007!2.90e-09!155;UBERON:0001555!2.90e-09!155;UBERON:0007026!2.90e-09!155;UBERON:0000490!6.54e-09!138;UBERON:0004119!2.31e-08!169;UBERON:0000925!2.31e-08!169;UBERON:0006595!2.31e-08!169;UBERON:0000077!8.68e-08!130;UBERON:0002100!2.15e-07!216;UBERON:0005256!5.74e-07!143;UBERON:0001041!7.13e-07!98|ontology_enrichment_uberon_v019=UBERON:0002107;1.08e-46;19!UBERON:0006925;1.08e-46;19!UBERON:0002423;1.40e-35;25!UBERON:0002365;4.72e-27;31!UBERON:0002330;4.72e-27;31!UBERON:0002368;1.08e-23;33!UBERON:0000949;3.39e-17;43!UBERON:0005172;1.15e-10;52!UBERON:0005173;1.15e-10;52!UBERON:0002530;4.07e-10;57!UBERON:0002417;2.02e-09;58!UBERON:0000916;2.02e-09;58!UBERON:0001007;4.89e-09;81!UBERON:0001242;1.44e-07;4!UBERON:0001262;1.44e-07;4!UBERON:0004786;1.44e-07;4!UBERON:0004808;1.44e-07;4!UBERON:0001277;1.44e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.60e-47,19;UBERON:0006925,9.60e-47,19;UBERON:0008836,9.60e-47,19;UBERON:0008835,2.00e-40,22;UBERON:0003894,2.00e-40,22;UBERON:0009854,1.10e-38,23;UBERON:0007499,1.28e-35,25;UBERON:0009497,1.28e-35,25;UBERON:0000015,1.28e-35,25;UBERON:0002423,1.28e-35,25;UBERON:0006235,1.28e-35,25;UBERON:0004161,1.28e-35,25;UBERON:0009856,2.91e-34,26;UBERON:0002365,8.63e-29,31;UBERON:0002330,8.63e-29,31;UBERON:0002368,1.56e-25,35;UBERON:0003929,1.72e-22,54;UBERON:0000949,6.45e-20,45;UBERON:0005172,1.25e-16,54;UBERON:0005173,1.25e-16,54;UBERON:0002530,3.09e-15,59;UBERON:0002417,5.51e-15,60;UBERON:0000916,5.51e-15,60;UBERON:0005911,7.53e-15,82;UBERON:0001041,2.28e-10,87;UBERON:0004921,3.10e-10,118;UBERON:0005177,6.14e-09,101;UBERON:0001007,2.49e-08,145;UBERON:0001555,2.49e-08,145;UBERON:0007026,2.49e-08,145;UBERON:0000490,3.24e-08,148;UBERON:0009569,4.62e-08,112;UBERON:0003914,1.02e-07,117;UBERON:0001242,1.49e-07,4;UBERON:0001262,1.49e-07,4;UBERON:0004786,1.49e-07,4;UBERON:0004808,1.49e-07,4;UBERON:0001277,1.49e-07,4;UBERON:0004119,1.52e-07,160;UBERON:0000925,1.52e-07,160;UBERON:0006595,1.52e-07,160;UBERON:0005256,2.12e-07,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33775174109154,0,0.590789906681404,0,3.93563003337963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49688046383725,1.07140615895516,1.07845670166696,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02586563574658,3.97520666736664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@ENST00000422253}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000422253_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_ENST00000422253_5end | |||
|id=chr1:168464875..168464884,- | |||
|ontology_enrichment_celltype=CL:0000181!8.89e-25!12;CL:0000417!8.89e-25!12;CL:0000668!8.89e-25!12;CL:0000414!8.89e-25!12;CL:0000412!8.89e-25!12;CL:0000182!8.89e-25!12;CL:0000223!5.18e-12!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.83e-33;12!CL:0002563;1.44e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.21e-33,12;CL:0000223,5.74e-11,58;CL:0002563,1.49e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.08e-56;11!UBERON:0009497;2.27e-47;13!UBERON:0001041;8.65e-21;30!UBERON:0003104;4.50e-20;31!CL:0000223;3.17e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.37e-30!19;UBERON:0006925!4.37e-30!19;UBERON:0008836!4.37e-30!19;UBERON:0009497!1.75e-29!25;UBERON:0000015!1.75e-29!25;UBERON:0002423!1.75e-29!25;UBERON:0006235!1.75e-29!25;UBERON:0004161!1.75e-29!25;UBERON:0005057!2.93e-28!26;UBERON:0008835!6.44e-26!22;UBERON:0003894!6.44e-26!22;UBERON:0009854!9.07e-25!23;UBERON:0005172!2.45e-24!55;UBERON:0005173!2.45e-24!55;UBERON:0007499!9.55e-23!25;UBERON:0009856!7.50e-22!26;UBERON:0002417!8.23e-22!61;UBERON:0000916!8.23e-22!61;UBERON:0003929!1.11e-20!54;UBERON:0002365!3.06e-18!31;UBERON:0002330!3.06e-18!31;UBERON:0002368!4.32e-16!35;UBERON:0005911!3.39e-13!82;UBERON:0000949!2.21e-12!45;UBERON:0002530!4.79e-12!59;UBERON:0005177!7.98e-12!107;UBERON:0009569!4.06e-11!113;UBERON:0004921!1.55e-09!129;UBERON:0004185!1.55e-09!129;UBERON:0001007!2.90e-09!155;UBERON:0001555!2.90e-09!155;UBERON:0007026!2.90e-09!155;UBERON:0000490!6.54e-09!138;UBERON:0004119!2.31e-08!169;UBERON:0000925!2.31e-08!169;UBERON:0006595!2.31e-08!169;UBERON:0000077!8.68e-08!130;UBERON:0002100!2.15e-07!216;UBERON:0005256!5.74e-07!143;UBERON:0001041!7.13e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.08e-46;19!UBERON:0006925;1.08e-46;19!UBERON:0002423;1.40e-35;25!UBERON:0002365;4.72e-27;31!UBERON:0002330;4.72e-27;31!UBERON:0002368;1.08e-23;33!UBERON:0000949;3.39e-17;43!UBERON:0005172;1.15e-10;52!UBERON:0005173;1.15e-10;52!UBERON:0002530;4.07e-10;57!UBERON:0002417;2.02e-09;58!UBERON:0000916;2.02e-09;58!UBERON:0001007;4.89e-09;81!UBERON:0001242;1.44e-07;4!UBERON:0001262;1.44e-07;4!UBERON:0004786;1.44e-07;4!UBERON:0004808;1.44e-07;4!UBERON:0001277;1.44e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.60e-47,19;UBERON:0006925,9.60e-47,19;UBERON:0008836,9.60e-47,19;UBERON:0008835,2.00e-40,22;UBERON:0003894,2.00e-40,22;UBERON:0009854,1.10e-38,23;UBERON:0007499,1.28e-35,25;UBERON:0009497,1.28e-35,25;UBERON:0000015,1.28e-35,25;UBERON:0002423,1.28e-35,25;UBERON:0006235,1.28e-35,25;UBERON:0004161,1.28e-35,25;UBERON:0009856,2.91e-34,26;UBERON:0002365,8.63e-29,31;UBERON:0002330,8.63e-29,31;UBERON:0002368,1.56e-25,35;UBERON:0003929,1.72e-22,54;UBERON:0000949,6.45e-20,45;UBERON:0005172,1.25e-16,54;UBERON:0005173,1.25e-16,54;UBERON:0002530,3.09e-15,59;UBERON:0002417,5.51e-15,60;UBERON:0000916,5.51e-15,60;UBERON:0005911,7.53e-15,82;UBERON:0001041,2.28e-10,87;UBERON:0004921,3.10e-10,118;UBERON:0005177,6.14e-09,101;UBERON:0001007,2.49e-08,145;UBERON:0001555,2.49e-08,145;UBERON:0007026,2.49e-08,145;UBERON:0000490,3.24e-08,148;UBERON:0009569,4.62e-08,112;UBERON:0003914,1.02e-07,117;UBERON:0001242,1.49e-07,4;UBERON:0001262,1.49e-07,4;UBERON:0004786,1.49e-07,4;UBERON:0004808,1.49e-07,4;UBERON:0001277,1.49e-07,4;UBERON:0004119,1.52e-07,160;UBERON:0000925,1.52e-07,160;UBERON:0006595,1.52e-07,160;UBERON:0005256,2.12e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33775174109154,0,0.590789906681404,0,3.93563003337963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49688046383725,1.07140615895516,1.07845670166696,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02586563574658,3.97520666736664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000422253 | |||
}} |
Revision as of 01:37, 12 September 2013
Short description: | p1@ENST00000422253 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000422253_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000422253_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.21e-33 | 12 |
endodermal cell | 5.74e-11 | 58 |
intestinal epithelial cell | 1.49e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.